Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060767.seq
(673 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC070145-1|AAH70145.1| 373|Homo sapiens lipoyltransferase 1 pro... 110 4e-24
BC009772-1|AAH09772.1| 373|Homo sapiens lipoyltransferase 1 pro... 110 4e-24
BC007001-1|AAH07001.1| 373|Homo sapiens lipoyltransferase 1 pro... 110 4e-24
AC092587-2|AAX88927.1| 373|Homo sapiens unknown protein. 110 4e-24
AB017567-1|BAA76368.1| 373|Homo sapiens lipoyltransferase protein. 110 4e-24
AB017566-1|BAA76367.1| 373|Homo sapiens lipoyltransferase protein. 110 4e-24
L07590-1|AAB02613.1| 1150|Homo sapiens protein phosphatase 2A 13... 31 3.8
BC065531-1|AAH65531.1| 1150|Homo sapiens protein phosphatase 2 (... 31 3.8
>BC070145-1|AAH70145.1| 373|Homo sapiens lipoyltransferase 1
protein.
Length = 373
Score = 110 bits (265), Expect = 4e-24
Identities = 45/83 (54%), Positives = 60/83 (72%)
Frame = +2
Query: 260 VFMSQSTDIYTNLALEDWLYKNMDFTNHHVMMVWRNEPCVVIGRHQNPWLEANVPLLSEK 439
+ S S D+Y NLA+EDW++ +M+ ++ W+N P VVIGRHQNPW E N+ L+ E+
Sbjct: 33 ILQSISNDVYQNLAVEDWIHDHMNLEGKPILFFWQNSPSVVIGRHQNPWQECNLNLMREE 92
Query: 440 EIALARRNSGGGTVYHDRGNLNI 508
I LARR SGGGTVYHD GN+N+
Sbjct: 93 GIKLARRRSGGGTVYHDMGNINL 115
Score = 42.3 bits (95), Expect = 0.002
Identities = 23/57 (40%), Positives = 37/57 (64%), Gaps = 3/57 (5%)
Frame = +1
Query: 508 TFFAPRERYDRNYNLKLIKRALFR---SFGIKSTINERQDLIVRDKYKVSGNSCKVG 669
TFF +++YDR NLKLI RAL +++T +R DL++ ++K+SG + K+G
Sbjct: 116 TFFTTKKKYDRMENLKLIVRALNAVQPQLDVQAT--KRFDLLLDGQFKISGTASKIG 170
>BC009772-1|AAH09772.1| 373|Homo sapiens lipoyltransferase 1
protein.
Length = 373
Score = 110 bits (265), Expect = 4e-24
Identities = 45/83 (54%), Positives = 60/83 (72%)
Frame = +2
Query: 260 VFMSQSTDIYTNLALEDWLYKNMDFTNHHVMMVWRNEPCVVIGRHQNPWLEANVPLLSEK 439
+ S S D+Y NLA+EDW++ +M+ ++ W+N P VVIGRHQNPW E N+ L+ E+
Sbjct: 33 ILQSISNDVYQNLAVEDWIHDHMNLEGKPILFFWQNSPSVVIGRHQNPWQECNLNLMREE 92
Query: 440 EIALARRNSGGGTVYHDRGNLNI 508
I LARR SGGGTVYHD GN+N+
Sbjct: 93 GIKLARRRSGGGTVYHDMGNINL 115
Score = 42.3 bits (95), Expect = 0.002
Identities = 23/57 (40%), Positives = 37/57 (64%), Gaps = 3/57 (5%)
Frame = +1
Query: 508 TFFAPRERYDRNYNLKLIKRALFR---SFGIKSTINERQDLIVRDKYKVSGNSCKVG 669
TFF +++YDR NLKLI RAL +++T +R DL++ ++K+SG + K+G
Sbjct: 116 TFFTTKKKYDRMENLKLIVRALNAVQPQLDVQAT--KRFDLLLDGQFKISGTASKIG 170
>BC007001-1|AAH07001.1| 373|Homo sapiens lipoyltransferase 1
protein.
Length = 373
Score = 110 bits (265), Expect = 4e-24
Identities = 45/83 (54%), Positives = 60/83 (72%)
Frame = +2
Query: 260 VFMSQSTDIYTNLALEDWLYKNMDFTNHHVMMVWRNEPCVVIGRHQNPWLEANVPLLSEK 439
+ S S D+Y NLA+EDW++ +M+ ++ W+N P VVIGRHQNPW E N+ L+ E+
Sbjct: 33 ILQSISNDVYQNLAVEDWIHDHMNLEGKPILFFWQNSPSVVIGRHQNPWQECNLNLMREE 92
Query: 440 EIALARRNSGGGTVYHDRGNLNI 508
I LARR SGGGTVYHD GN+N+
Sbjct: 93 GIKLARRRSGGGTVYHDMGNINL 115
Score = 42.3 bits (95), Expect = 0.002
Identities = 23/57 (40%), Positives = 37/57 (64%), Gaps = 3/57 (5%)
Frame = +1
Query: 508 TFFAPRERYDRNYNLKLIKRALFR---SFGIKSTINERQDLIVRDKYKVSGNSCKVG 669
TFF +++YDR NLKLI RAL +++T +R DL++ ++K+SG + K+G
Sbjct: 116 TFFTTKKKYDRMENLKLIVRALNAVQPQLDVQAT--KRFDLLLDGQFKISGTASKIG 170
>AC092587-2|AAX88927.1| 373|Homo sapiens unknown protein.
Length = 373
Score = 110 bits (265), Expect = 4e-24
Identities = 45/83 (54%), Positives = 60/83 (72%)
Frame = +2
Query: 260 VFMSQSTDIYTNLALEDWLYKNMDFTNHHVMMVWRNEPCVVIGRHQNPWLEANVPLLSEK 439
+ S S D+Y NLA+EDW++ +M+ ++ W+N P VVIGRHQNPW E N+ L+ E+
Sbjct: 33 ILQSISNDVYQNLAVEDWIHDHMNLEGKPILFFWQNSPSVVIGRHQNPWQECNLNLMREE 92
Query: 440 EIALARRNSGGGTVYHDRGNLNI 508
I LARR SGGGTVYHD GN+N+
Sbjct: 93 GIKLARRRSGGGTVYHDMGNINL 115
Score = 42.3 bits (95), Expect = 0.002
Identities = 23/57 (40%), Positives = 37/57 (64%), Gaps = 3/57 (5%)
Frame = +1
Query: 508 TFFAPRERYDRNYNLKLIKRALFR---SFGIKSTINERQDLIVRDKYKVSGNSCKVG 669
TFF +++YDR NLKLI RAL +++T +R DL++ ++K+SG + K+G
Sbjct: 116 TFFTTKKKYDRMENLKLIVRALNAVQPQLDVQAT--KRFDLLLDGQFKISGTASKIG 170
>AB017567-1|BAA76368.1| 373|Homo sapiens lipoyltransferase protein.
Length = 373
Score = 110 bits (265), Expect = 4e-24
Identities = 45/83 (54%), Positives = 60/83 (72%)
Frame = +2
Query: 260 VFMSQSTDIYTNLALEDWLYKNMDFTNHHVMMVWRNEPCVVIGRHQNPWLEANVPLLSEK 439
+ S S D+Y NLA+EDW++ +M+ ++ W+N P VVIGRHQNPW E N+ L+ E+
Sbjct: 33 ILQSISNDVYQNLAVEDWIHDHMNLEGKPILFFWQNSPSVVIGRHQNPWQECNLNLMREE 92
Query: 440 EIALARRNSGGGTVYHDRGNLNI 508
I LARR SGGGTVYHD GN+N+
Sbjct: 93 GIKLARRRSGGGTVYHDMGNINL 115
Score = 42.3 bits (95), Expect = 0.002
Identities = 23/57 (40%), Positives = 37/57 (64%), Gaps = 3/57 (5%)
Frame = +1
Query: 508 TFFAPRERYDRNYNLKLIKRALFR---SFGIKSTINERQDLIVRDKYKVSGNSCKVG 669
TFF +++YDR NLKLI RAL +++T +R DL++ ++K+SG + K+G
Sbjct: 116 TFFTTKKKYDRMENLKLIVRALNAVQPQLDVQAT--KRFDLLLDGQFKISGTASKIG 170
>AB017566-1|BAA76367.1| 373|Homo sapiens lipoyltransferase protein.
Length = 373
Score = 110 bits (265), Expect = 4e-24
Identities = 45/83 (54%), Positives = 60/83 (72%)
Frame = +2
Query: 260 VFMSQSTDIYTNLALEDWLYKNMDFTNHHVMMVWRNEPCVVIGRHQNPWLEANVPLLSEK 439
+ S S D+Y NLA+EDW++ +M+ ++ W+N P VVIGRHQNPW E N+ L+ E+
Sbjct: 33 ILQSISNDVYQNLAVEDWIHDHMNLEGKPILFFWQNSPSVVIGRHQNPWQECNLNLMREE 92
Query: 440 EIALARRNSGGGTVYHDRGNLNI 508
I LARR SGGGTVYHD GN+N+
Sbjct: 93 GIKLARRRSGGGTVYHDMGNINL 115
Score = 42.3 bits (95), Expect = 0.002
Identities = 23/57 (40%), Positives = 37/57 (64%), Gaps = 3/57 (5%)
Frame = +1
Query: 508 TFFAPRERYDRNYNLKLIKRALFR---SFGIKSTINERQDLIVRDKYKVSGNSCKVG 669
TFF +++YDR NLKLI RAL +++T +R DL++ ++K+SG + K+G
Sbjct: 116 TFFTTKKKYDRMENLKLIVRALNAVQPQLDVQAT--KRFDLLLDGQFKISGTASKIG 170
>L07590-1|AAB02613.1| 1150|Homo sapiens protein phosphatase 2A 130
kDa regulatory subunit protein.
Length = 1150
Score = 31.1 bits (67), Expect = 3.8
Identities = 26/77 (33%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Frame = +2
Query: 71 VKKTLTKQVKDGSSYGEKNSIQQCLHICWSCTENIYKKCCG-IQQSGRIKKGESASN*GG 247
V + L K D S G I+ CL I C+E++ KKC I+Q + K G S S G
Sbjct: 211 VTQILEKHKIDNFSSG--TDIKMCLDILLKCSEDL-KKCTDIIKQCIKKKSGSSISEGSG 267
Query: 248 DHQSVFMSQSTDIYTNL 298
+ +S S +Y N+
Sbjct: 268 NDT---ISSSETVYMNV 281
>BC065531-1|AAH65531.1| 1150|Homo sapiens protein phosphatase 2
(formerly 2A), regulatory subunit B'', alpha protein.
Length = 1150
Score = 31.1 bits (67), Expect = 3.8
Identities = 26/77 (33%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Frame = +2
Query: 71 VKKTLTKQVKDGSSYGEKNSIQQCLHICWSCTENIYKKCCG-IQQSGRIKKGESASN*GG 247
V + L K D S G I+ CL I C+E++ KKC I+Q + K G S S G
Sbjct: 211 VTQILEKHKIDNFSSG--TDIKMCLDILLKCSEDL-KKCTDIIKQCIKKKSGSSISEGSG 267
Query: 248 DHQSVFMSQSTDIYTNL 298
+ +S S +Y N+
Sbjct: 268 NDT---ISSSETVYMNV 281
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,025,889
Number of Sequences: 237096
Number of extensions: 2245968
Number of successful extensions: 4688
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 4443
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4677
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7647512560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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