Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060767.seq
         (673 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY094796-1|AAM11149.1|  396|Drosophila melanogaster LD22815p pro...   144   1e-34
AE013599-2215|AAF58045.2|  396|Drosophila melanogaster CG8446-PA...   144   1e-34

>AY094796-1|AAM11149.1|  396|Drosophila melanogaster LD22815p
           protein.
          Length = 396

 Score =  144 bits (349), Expect = 1e-34
 Identities = 75/140 (53%), Positives = 93/140 (66%), Gaps = 1/140 (0%)
 Frame = +2

Query: 254 QSVFMSQSTDIYTNLALEDWLYKNMDFTNHHVMMVWRNEPCVVIGRHQNPWLEANVPLLS 433
           +SVF+SQS+D++TNLALEDWLYKN DF+ HHV+++W N+PCVVIGRHQNP+ EANV  L 
Sbjct: 58  KSVFISQSSDVFTNLALEDWLYKNFDFSRHHVLLLWANDPCVVIGRHQNPFTEANVSQLV 117

Query: 434 EKEIALARRNSGGGTVYHDRGNLNIHSL-PHVRDMTEITI*S*LREHCSEVLALSQLLMN 610
           E+ I LARRNSGGG VYHD GNLN     P  R   +  +    R    E    +++  N
Sbjct: 118 ERGITLARRNSGGGAVYHDLGNLNCTFFSPRERYDRKYNLNIVTRALFREWAIKAEI--N 175

Query: 611 VRTLSSETNTRYLGTAAKLG 670
            R      N +  GTAAKLG
Sbjct: 176 ERDDIVVMNKKISGTAAKLG 195


>AE013599-2215|AAF58045.2|  396|Drosophila melanogaster CG8446-PA
           protein.
          Length = 396

 Score =  144 bits (349), Expect = 1e-34
 Identities = 75/140 (53%), Positives = 93/140 (66%), Gaps = 1/140 (0%)
 Frame = +2

Query: 254 QSVFMSQSTDIYTNLALEDWLYKNMDFTNHHVMMVWRNEPCVVIGRHQNPWLEANVPLLS 433
           +SVF+SQS+D++TNLALEDWLYKN DF+ HHV+++W N+PCVVIGRHQNP+ EANV  L 
Sbjct: 58  KSVFISQSSDVFTNLALEDWLYKNFDFSRHHVLLLWANDPCVVIGRHQNPFTEANVSQLV 117

Query: 434 EKEIALARRNSGGGTVYHDRGNLNIHSL-PHVRDMTEITI*S*LREHCSEVLALSQLLMN 610
           E+ I LARRNSGGG VYHD GNLN     P  R   +  +    R    E    +++  N
Sbjct: 118 ERGITLARRNSGGGAVYHDLGNLNCTFFSPRERYDRKYNLNIVTRALFREWAIKAEI--N 175

Query: 611 VRTLSSETNTRYLGTAAKLG 670
            R      N +  GTAAKLG
Sbjct: 176 ERDDIVVMNKKISGTAAKLG 195


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,040,917
Number of Sequences: 53049
Number of extensions: 680780
Number of successful extensions: 2044
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1701
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2038
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2910007350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)