Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060764.seq
         (685 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine vasopre...    25   0.58 
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    23   1.8  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    23   2.3  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    21   9.4  

>EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine
           vasopressin-like peptide protein.
          Length = 146

 Score = 25.0 bits (52), Expect = 0.58
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = +3

Query: 156 QNTGTCPESSCACPETSCACPETSCACPESS 248
           +NTG C      C + SC   + SCA  + S
Sbjct: 99  KNTGRCAFDGICCSQDSCHA-DKSCASDDKS 128


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = -3

Query: 602 WASVQSSIWKLLAWVXQFWLLLPQ 531
           W S +S +   LAWV      +PQ
Sbjct: 151 WTSRRSKVMVYLAWVASLAFCIPQ 174


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 9/28 (32%), Positives = 11/28 (39%)
 Frame = +1

Query: 529 GCGNSSQNCXTQASSFQIEDCTEAQKDW 612
           G G   + C T A  F   DC+     W
Sbjct: 498 GNGRCDEECNTYACEFDGNDCSLGINPW 525


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = +3

Query: 171 CPESSCACPETSC 209
           CP+ S AC + +C
Sbjct: 117 CPDGSLACGDGNC 129


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,356
Number of Sequences: 336
Number of extensions: 772
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17906060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)