Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060764.seq
         (685 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X63338-1|CAA44938.1|  175|Homo sapiens high sulfur keratin protein.    33   0.72 
BC101152-1|AAI01153.1|  177|Homo sapiens KRTAP1-3 protein protein.     33   0.72 
AB081338-1|BAC15619.1|  177|Homo sapiens keratin associated prot...    33   0.72 
AB081339-1|BAC15620.1|  141|Homo sapiens keratin associated prot...    33   1.3  
AB126079-1|BAD20206.1|  202|Homo sapiens keratin associated prot...    32   2.2  
BC101555-1|AAI01556.1|  174|Homo sapiens keratin associated prot...    31   2.9  
BC093841-1|AAH93841.1|  174|Homo sapiens keratin associated prot...    31   2.9  
BC069533-1|AAH69533.1|  174|Homo sapiens keratin associated prot...    31   2.9  
AJ406928-1|CAC27567.1|  174|Homo sapiens keratin associated prot...    31   2.9  
BC131611-1|AAI31612.1|  298|Homo sapiens keratin associated prot...    31   3.8  
AK122706-1|BAC85504.1|  814|Homo sapiens  ISOFORM.  protein.           31   3.8  
AB076359-1|BAD01546.1|  298|Homo sapiens keratin associated prot...    31   3.8  
AK127208-1|BAC86884.1|  168|Homo sapiens protein ( Homo sapiens ...    30   6.7  
AF348671-1|AAL83902.1|   61|Homo sapiens metallothionein 1M prot...    30   6.7  
U95031-1|AAB65151.1|  879|Homo sapiens sublingual gland mucin pr...    30   8.8  

>X63338-1|CAA44938.1|  175|Homo sapiens high sulfur keratin protein.
          Length = 175

 Score = 33.5 bits (73), Expect = 0.72
 Identities = 22/51 (43%), Positives = 29/51 (56%), Gaps = 8/51 (15%)
 Frame = +3

Query: 126 FCKLY*TCVSQNTGTCPESSC--ACPETSC---ACPETSC---ACPESSLC 254
           FC  Y +C    +GTC  S C  +C ETSC   +C ETSC   +C ++S C
Sbjct: 8   FCG-YPSC--STSGTCGSSCCQPSCCETSCCQPSCCETSCCQPSCCQTSFC 55


>BC101152-1|AAI01153.1|  177|Homo sapiens KRTAP1-3 protein protein.
          Length = 177

 Score = 33.5 bits (73), Expect = 0.72
 Identities = 22/51 (43%), Positives = 29/51 (56%), Gaps = 8/51 (15%)
 Frame = +3

Query: 126 FCKLY*TCVSQNTGTCPESSC--ACPETSC---ACPETSC---ACPESSLC 254
           FC  Y +C    +GTC  S C  +C ETSC   +C ETSC   +C ++S C
Sbjct: 8   FCG-YPSC--STSGTCGSSCCQPSCCETSCCQPSCCETSCCQPSCCQTSFC 55


>AB081338-1|BAC15619.1|  177|Homo sapiens keratin associated protein
           1.8 protein.
          Length = 177

 Score = 33.5 bits (73), Expect = 0.72
 Identities = 22/51 (43%), Positives = 29/51 (56%), Gaps = 8/51 (15%)
 Frame = +3

Query: 126 FCKLY*TCVSQNTGTCPESSC--ACPETSC---ACPETSC---ACPESSLC 254
           FC  Y +C    +GTC  S C  +C ETSC   +C ETSC   +C ++S C
Sbjct: 8   FCG-YPSC--STSGTCGSSCCQPSCCETSCCQPSCCETSCCQPSCCQTSFC 55


>AB081339-1|BAC15620.1|  141|Homo sapiens keratin associated protein
           1.9 protein.
          Length = 141

 Score = 32.7 bits (71), Expect = 1.3
 Identities = 22/51 (43%), Positives = 29/51 (56%), Gaps = 8/51 (15%)
 Frame = +3

Query: 126 FCKLY*TCVSQNTGTCPESSC--ACPETSC---ACPETSC---ACPESSLC 254
           FC  Y +C    +GTC  S C  +C ETSC   +C ETSC   +C ++S C
Sbjct: 8   FCG-YPSC--STSGTCGSSCCQPSCCETSCCQPSCCETSCCQPSCCQTSSC 55


>AB126079-1|BAD20206.1|  202|Homo sapiens keratin associated protein
           protein.
          Length = 202

 Score = 31.9 bits (69), Expect = 2.2
 Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
 Frame = +3

Query: 147 CVSQNTGTCPESSCACPETSCACPETSC--ACPESSLC 254
           C S   G+C +SSC  P   C C  + C   C +SS C
Sbjct: 149 CCSSGCGSCCQSSCCNP---CCCQSSCCVPVCCQSSCC 183


>BC101555-1|AAI01556.1|  174|Homo sapiens keratin associated protein
           1.5 protein.
          Length = 174

 Score = 31.5 bits (68), Expect = 2.9
 Identities = 16/31 (51%), Positives = 19/31 (61%), Gaps = 5/31 (16%)
 Frame = +3

Query: 162 TGTCPESSC--ACPETSC---ACPETSCACP 239
           +GTC  S C  +C ETSC   +C ETSC  P
Sbjct: 53  SGTCSSSCCQPSCCETSCCQPSCCETSCCQP 83


>BC093841-1|AAH93841.1|  174|Homo sapiens keratin associated protein
           1-5 protein.
          Length = 174

 Score = 31.5 bits (68), Expect = 2.9
 Identities = 16/31 (51%), Positives = 19/31 (61%), Gaps = 5/31 (16%)
 Frame = +3

Query: 162 TGTCPESSC--ACPETSC---ACPETSCACP 239
           +GTC  S C  +C ETSC   +C ETSC  P
Sbjct: 53  SGTCSSSCCQPSCCETSCCQPSCCETSCCQP 83


>BC069533-1|AAH69533.1|  174|Homo sapiens keratin associated protein
           1-5 protein.
          Length = 174

 Score = 31.5 bits (68), Expect = 2.9
 Identities = 16/31 (51%), Positives = 19/31 (61%), Gaps = 5/31 (16%)
 Frame = +3

Query: 162 TGTCPESSC--ACPETSC---ACPETSCACP 239
           +GTC  S C  +C ETSC   +C ETSC  P
Sbjct: 53  SGTCSSSCCQPSCCETSCCQPSCCETSCCQP 83


>AJ406928-1|CAC27567.1|  174|Homo sapiens keratin associated protein
           1.5 protein.
          Length = 174

 Score = 31.5 bits (68), Expect = 2.9
 Identities = 16/31 (51%), Positives = 19/31 (61%), Gaps = 5/31 (16%)
 Frame = +3

Query: 162 TGTCPESSC--ACPETSC---ACPETSCACP 239
           +GTC  S C  +C ETSC   +C ETSC  P
Sbjct: 53  SGTCSSSCCQPSCCETSCCQPSCCETSCCQP 83


>BC131611-1|AAI31612.1|  298|Homo sapiens keratin associated protein
           10-11 protein.
          Length = 298

 Score = 31.1 bits (67), Expect = 3.8
 Identities = 14/32 (43%), Positives = 19/32 (59%)
 Frame = +3

Query: 150 VSQNTGTCPESSCACPETSCACPETSCACPES 245
           V ++T   P SSC  P +SC   ++SC CP S
Sbjct: 244 VCRSTCCVPVSSCCAPTSSC---QSSCCCPAS 272


>AK122706-1|BAC85504.1|  814|Homo sapiens  ISOFORM.  protein.
          Length = 814

 Score = 31.1 bits (67), Expect = 3.8
 Identities = 15/33 (45%), Positives = 15/33 (45%), Gaps = 3/33 (9%)
 Frame = +3

Query: 156 QNTGTCPESSCACPETSC---ACPETSCACPES 245
           Q  G C   SC   E SC    CP T CA P S
Sbjct: 384 QERGLCVRCSCQAGEVSCEEQECPVTPCALPAS 416


>AB076359-1|BAD01546.1|  298|Homo sapiens keratin associated protein
           protein.
          Length = 298

 Score = 31.1 bits (67), Expect = 3.8
 Identities = 14/32 (43%), Positives = 19/32 (59%)
 Frame = +3

Query: 150 VSQNTGTCPESSCACPETSCACPETSCACPES 245
           V ++T   P SSC  P +SC   ++SC CP S
Sbjct: 244 VCRSTCCVPVSSCCAPTSSC---QSSCCCPAS 272


>AK127208-1|BAC86884.1|  168|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45275 fis, clone BRHIP3000859. ).
          Length = 168

 Score = 30.3 bits (65), Expect = 6.7
 Identities = 14/25 (56%), Positives = 15/25 (60%)
 Frame = +3

Query: 177 ESSCACPETSCACPETSCACPESSL 251
           E SCA PE+S    E S   PESSL
Sbjct: 131 EGSCAAPESSPPASEASLPAPESSL 155


>AF348671-1|AAL83902.1|   61|Homo sapiens metallothionein 1M
           protein.
          Length = 61

 Score = 30.3 bits (65), Expect = 6.7
 Identities = 12/39 (30%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
 Frame = +3

Query: 144 TCVSQNTGTCPESSC-ACPETSCACPETSCA-CPESSLC 254
           +C    + TC E  C +C ++ C+C    CA C    +C
Sbjct: 12  SCACTGSCTCKECKCTSCKKSCCSCCPVGCAKCAHGCVC 50


>U95031-1|AAB65151.1|  879|Homo sapiens sublingual gland mucin
           protein.
          Length = 879

 Score = 29.9 bits (64), Expect = 8.8
 Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
 Frame = +3

Query: 162 TGTCPESSCACPETSCACPETSCACP--ESSLC 254
           T  CPE+ C C  T+  CP++   CP  + S+C
Sbjct: 608 TPCCPETVCVCNTTT--CPQSLPVCPPGQESIC 638


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 43,152,070
Number of Sequences: 237096
Number of extensions: 545968
Number of successful extensions: 2312
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1692
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2172
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7783251346
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)