Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060762.seq
(685 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 31 0.008
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 31 0.008
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 30 0.018
DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex det... 27 0.13
DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex det... 27 0.13
DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex det... 27 0.13
DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex det... 27 0.13
DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex det... 25 0.67
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 25 0.89
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 25 0.89
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 24 1.2
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 23 2.1
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 23 2.7
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 23 2.7
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 23 2.7
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 23 2.7
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 23 2.7
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 23 2.7
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 23 2.7
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 23 3.6
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 23 3.6
DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex det... 23 3.6
DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex det... 23 3.6
DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex det... 23 3.6
DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex det... 23 3.6
DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex det... 23 3.6
DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 23 3.6
DQ288392-1|ABC41342.1| 120|Apis mellifera nanos protein. 23 3.6
DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex det... 21 8.3
AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex det... 21 8.3
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 21 8.3
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 31.5 bits (68), Expect = 0.008
Identities = 18/62 (29%), Positives = 27/62 (43%)
Frame = -1
Query: 325 RKHERNERSQN*YRH*LKRKTMKRQNFLMINKRHIRCILCRTYPFSTIKLHNVHKKSNYN 146
+K +NER YR K ++ R + I L Y +S +N + +NYN
Sbjct: 47 QKSYKNEREYRKYRETSKERSQDRTERETSKEPKIISSLSNNYKYSNYNNYNNNYNNNYN 106
Query: 145 NN 140
NN
Sbjct: 107 NN 108
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 31.5 bits (68), Expect = 0.008
Identities = 18/62 (29%), Positives = 27/62 (43%)
Frame = -1
Query: 325 RKHERNERSQN*YRH*LKRKTMKRQNFLMINKRHIRCILCRTYPFSTIKLHNVHKKSNYN 146
+K +NER YR K ++ R + I L Y +S +N + +NYN
Sbjct: 47 QKSYKNEREYRKYRETSKERSQDRTERETSKEPKIISSLSNNYKYSNYNNYNNNYNNNYN 106
Query: 145 NN 140
NN
Sbjct: 107 NN 108
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 30.3 bits (65), Expect = 0.018
Identities = 17/61 (27%), Positives = 27/61 (44%)
Frame = -1
Query: 325 RKHERNERSQN*YRH*LKRKTMKRQNFLMINKRHIRCILCRTYPFSTIKLHNVHKKSNYN 146
+K +NE S YR K ++ R+ + I L Y +S +N + +NYN
Sbjct: 280 QKSYKNENSYRKYRETSKERSRDRKERERSKEPKIISSLSNNYKYSNYNNYNNYNNNNYN 339
Query: 145 N 143
N
Sbjct: 340 N 340
>DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 27.5 bits (58), Expect = 0.13
Identities = 17/62 (27%), Positives = 28/62 (45%)
Frame = -1
Query: 325 RKHERNERSQN*YRH*LKRKTMKRQNFLMINKRHIRCILCRTYPFSTIKLHNVHKKSNYN 146
+K +NER YR + ++ R+ + I L Y +S +N + +NYN
Sbjct: 47 QKSYKNEREYREYRETSRERSRDRKERERSKEPKIISSLSNNYKYSN---YNNYNNNNYN 103
Query: 145 NN 140
NN
Sbjct: 104 NN 105
>DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 27.5 bits (58), Expect = 0.13
Identities = 17/62 (27%), Positives = 28/62 (45%)
Frame = -1
Query: 325 RKHERNERSQN*YRH*LKRKTMKRQNFLMINKRHIRCILCRTYPFSTIKLHNVHKKSNYN 146
+K +NER YR + ++ R+ + I L Y +S +N + +NYN
Sbjct: 47 QKSYKNEREYREYRETSRERSRDRKERERSKEPKIISSLSNNYKYSN---YNNYNNNNYN 103
Query: 145 NN 140
NN
Sbjct: 104 NN 105
>DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 27.5 bits (58), Expect = 0.13
Identities = 17/62 (27%), Positives = 28/62 (45%)
Frame = -1
Query: 325 RKHERNERSQN*YRH*LKRKTMKRQNFLMINKRHIRCILCRTYPFSTIKLHNVHKKSNYN 146
+K +NER YR + ++ R+ + I L Y +S +N + +NYN
Sbjct: 47 QKSYKNEREYREYRETSRERSRDRKERERSKEPKIISSLSNNYKYSN---YNNYNNNNYN 103
Query: 145 NN 140
NN
Sbjct: 104 NN 105
>DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 27.5 bits (58), Expect = 0.13
Identities = 17/62 (27%), Positives = 28/62 (45%)
Frame = -1
Query: 325 RKHERNERSQN*YRH*LKRKTMKRQNFLMINKRHIRCILCRTYPFSTIKLHNVHKKSNYN 146
+K +NER YR + ++ R+ + I L Y +S +N + +NYN
Sbjct: 47 QKSYKNEREYREYRETSRERSRDRKERERSKEPKIISSLSNNYKYSN---YNNYNNNNYN 103
Query: 145 NN 140
NN
Sbjct: 104 NN 105
>DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex
determiner protein.
Length = 178
Score = 25.0 bits (52), Expect = 0.67
Identities = 16/62 (25%), Positives = 25/62 (40%)
Frame = -1
Query: 325 RKHERNERSQN*YRH*LKRKTMKRQNFLMINKRHIRCILCRTYPFSTIKLHNVHKKSNYN 146
+K +NE S YR K ++ R+ + I L Y +S +N + K Y
Sbjct: 47 QKSYKNENSYRKYRETSKERSRDRKERERSKEPKIISSLSNNYKYSNYNNYNNYNKKLYY 106
Query: 145 NN 140
N
Sbjct: 107 KN 108
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 24.6 bits (51), Expect = 0.89
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +2
Query: 404 ACICVRSDAETEVLLVTSSRRPDNW 478
+CICVR AE +L S++ ++W
Sbjct: 487 SCICVRFIAEHTKMLEDSTKVKEDW 511
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 24.6 bits (51), Expect = 0.89
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +2
Query: 404 ACICVRSDAETEVLLVTSSRRPDNW 478
+CICVR AE +L S++ ++W
Sbjct: 487 SCICVRFIAEHTKMLEDSTKVKEDW 511
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 24.2 bits (50), Expect = 1.2
Identities = 8/28 (28%), Positives = 16/28 (57%)
Frame = -1
Query: 649 FLGHSHNINLCSVFVFSVPRILQDIVLV 566
F + H+ +CS+ + S+ QD+V +
Sbjct: 136 FESYPHDTQICSMMIESLSHTTQDLVFI 163
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 23.4 bits (48), Expect = 2.1
Identities = 15/62 (24%), Positives = 26/62 (41%)
Frame = -1
Query: 325 RKHERNERSQN*YRH*LKRKTMKRQNFLMINKRHIRCILCRTYPFSTIKLHNVHKKSNYN 146
R ER QN Y++ + + + ++ R R S++ +H +NYN
Sbjct: 271 RYSRSREREQNSYKNEREYRKYRERSKERSRDRTERERSREPKIISSLSNKTIHNNNNYN 330
Query: 145 NN 140
NN
Sbjct: 331 NN 332
Score = 23.0 bits (47), Expect = 2.7
Identities = 16/58 (27%), Positives = 25/58 (43%)
Frame = -1
Query: 313 RNERSQN*YRH*LKRKTMKRQNFLMINKRHIRCILCRTYPFSTIKLHNVHKKSNYNNN 140
+NER YR K ++ R +R + + TI +N + +NYNNN
Sbjct: 284 KNEREYRKYRERSKERSRDRTE----RERSREPKIISSLSNKTIHNNNNYNNNNYNNN 337
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 2.7
Identities = 14/55 (25%), Positives = 22/55 (40%)
Frame = -1
Query: 313 RNERSQN*YRH*LKRKTMKRQNFLMINKRHIRCILCRTYPFSTIKLHNVHKKSNY 149
+NER YR K ++ R + I L Y +S +N + +NY
Sbjct: 51 KNEREYQKYRETSKERSRDRTERERCKEPKIISSLSNNYKYSNYNNYNNNYNTNY 105
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 2.7
Identities = 14/55 (25%), Positives = 22/55 (40%)
Frame = -1
Query: 313 RNERSQN*YRH*LKRKTMKRQNFLMINKRHIRCILCRTYPFSTIKLHNVHKKSNY 149
+NER YR K ++ R + I L Y +S +N + +NY
Sbjct: 51 KNEREYQKYRETSKERSRDRTERERCKEPKIISSLSNNYKYSNYNNYNNNYNTNY 105
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 2.7
Identities = 14/55 (25%), Positives = 22/55 (40%)
Frame = -1
Query: 313 RNERSQN*YRH*LKRKTMKRQNFLMINKRHIRCILCRTYPFSTIKLHNVHKKSNY 149
+NER YR K ++ R + I L Y +S +N + +NY
Sbjct: 51 KNEREYQKYRETSKERSRDRTERERCKEPKIISSLSNNYKYSNYNNYNNNYNTNY 105
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 2.7
Identities = 14/55 (25%), Positives = 22/55 (40%)
Frame = -1
Query: 313 RNERSQN*YRH*LKRKTMKRQNFLMINKRHIRCILCRTYPFSTIKLHNVHKKSNY 149
+NER YR K ++ R + I L Y +S +N + +NY
Sbjct: 51 KNEREYQKYRETSKERSRDRTERERCKEPKIISSLSNNYKYSNYNNYNNNYNTNY 105
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 2.7
Identities = 14/55 (25%), Positives = 22/55 (40%)
Frame = -1
Query: 313 RNERSQN*YRH*LKRKTMKRQNFLMINKRHIRCILCRTYPFSTIKLHNVHKKSNY 149
+NER YR K ++ R + I L Y +S +N + +NY
Sbjct: 51 KNEREYQKYRETSKERSRDRTERERCKEPKIISSLSNNYKYSNYNNYNNNYNTNY 105
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 2.7
Identities = 14/55 (25%), Positives = 22/55 (40%)
Frame = -1
Query: 313 RNERSQN*YRH*LKRKTMKRQNFLMINKRHIRCILCRTYPFSTIKLHNVHKKSNY 149
+NER YR K ++ R + I L Y +S +N + +NY
Sbjct: 51 KNEREYQKYRETSKERSRDRTERERCKEPKIISSLSNNYKYSNYNNYNNNYNTNY 105
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 2.7
Identities = 14/55 (25%), Positives = 22/55 (40%)
Frame = -1
Query: 313 RNERSQN*YRH*LKRKTMKRQNFLMINKRHIRCILCRTYPFSTIKLHNVHKKSNY 149
+NER YR K ++ R + I L Y +S +N + +NY
Sbjct: 51 KNEREYQKYRETSKERSRDRTERERCKEPKIISSLSNNYKYSNYNNYNNNYNTNY 105
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.6 bits (46), Expect = 3.6
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -1
Query: 178 LHNVHKKSNYNNN 140
+HN + K NYNNN
Sbjct: 89 IHNNNYKYNYNNN 101
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.6 bits (46), Expect = 3.6
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -1
Query: 178 LHNVHKKSNYNNN 140
+HN + K NYNNN
Sbjct: 89 IHNNNYKYNYNNN 101
>DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.6 bits (46), Expect = 3.6
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -1
Query: 178 LHNVHKKSNYNNN 140
+HN + K NYNNN
Sbjct: 90 IHNNNYKYNYNNN 102
>DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.6 bits (46), Expect = 3.6
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -1
Query: 178 LHNVHKKSNYNNN 140
+HN + K NYNNN
Sbjct: 90 IHNNNYKYNYNNN 102
>DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.6 bits (46), Expect = 3.6
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -1
Query: 178 LHNVHKKSNYNNN 140
+HN + K NYNNN
Sbjct: 90 IHNNNYKYNYNNN 102
>DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.6 bits (46), Expect = 3.6
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -1
Query: 178 LHNVHKKSNYNNN 140
+HN + K NYNNN
Sbjct: 90 IHNNNYKYNYNNN 102
>DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 3.6
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = -1
Query: 190 STIKLHNVHKKSNYNNN 140
S++ +H +NYNNN
Sbjct: 83 SSLSNKTIHNNNNYNNN 99
>DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex
determiner protein.
Length = 191
Score = 22.6 bits (46), Expect = 3.6
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = -1
Query: 190 STIKLHNVHKKSNYNNN 140
S++ +H +NYNNN
Sbjct: 83 SSLSNKTIHNNNNYNNN 99
>DQ288392-1|ABC41342.1| 120|Apis mellifera nanos protein.
Length = 120
Score = 22.6 bits (46), Expect = 3.6
Identities = 13/44 (29%), Positives = 20/44 (45%)
Frame = +1
Query: 340 NGKGEA*FDKDI*RRGF*ATGGMYLRAFRCRNRGPAGDVFETAR 471
NG+ EA + K + + LRA+ C G GD+ T +
Sbjct: 46 NGEEEAYYRKHLLKDADGRVSCPVLRAYTCPICGACGDIAHTVK 89
>DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 21.4 bits (43), Expect = 8.3
Identities = 15/59 (25%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Frame = -1
Query: 313 RNERSQN*YRH*LKRKTMKR-QNFLMINKRHIRCILCRTYPFSTIKLHNVHKKSNYNNN 140
+NE+ YR K ++ R + + I + +T + +N + K NYNNN
Sbjct: 51 KNEKEYRKYRETSKERSRDRTERERSREPKIISSLSNKTIHNNNNYKYNYNNKYNYNNN 109
>AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 21.4 bits (43), Expect = 8.3
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = -1
Query: 178 LHNVHKKSNYNNNK 137
+HN + +NYNN K
Sbjct: 312 IHNNNNYNNYNNKK 325
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 21.4 bits (43), Expect = 8.3
Identities = 12/43 (27%), Positives = 17/43 (39%), Gaps = 1/43 (2%)
Frame = +2
Query: 407 CICVRSDAETEVLLVTSSRRPDNWIVPGGGVEPERSL-LSLRC 532
C+ AE + P WIV V ER+ ++L C
Sbjct: 689 CVAANPAAEVRYTAKLQVKVPPRWIVEPTDVSVERNKHVALHC 731
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 195,245
Number of Sequences: 438
Number of extensions: 4905
Number of successful extensions: 41
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20830365
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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