Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060761.seq
         (685 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-7|CAD27929.1|  555|Anopheles gambiae putative glycerol ...   105   1e-24
DQ974170-1|ABJ52810.1|  511|Anopheles gambiae serpin 12 protein.       23   6.8  
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    23   6.8  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            23   9.0  
AJ439353-4|CAD27926.1|  338|Anopheles gambiae putative hox prote...    23   9.0  

>AJ439353-7|CAD27929.1|  555|Anopheles gambiae putative glycerol
           kinase protein.
          Length = 555

 Score =  105 bits (252), Expect = 1e-24
 Identities = 45/85 (52%), Positives = 60/85 (70%)
 Frame = +3

Query: 255 RTSSTIDKLLDTVPNKTRNKNYLKPLCGLPLSPYFSAVKLRWLSDNVDPVKNAMKKGTCR 434
           RT  T+D++L  +P +  N N+ + L GLP+SPYFSA+KL WL DNV  V+ A ++  C 
Sbjct: 115 RTDKTVDRVLARLPEQ--NHNHFRALSGLPISPYFSALKLNWLKDNVVAVRKACRERRCY 172

Query: 435 FGTVDCWIIWNLTGGPNGGKHVTDV 509
            GT+D W++WNLTGGP GG  VTDV
Sbjct: 173 AGTIDTWLVWNLTGGPQGGAFVTDV 197



 Score = 96.7 bits (230), Expect = 6e-22
 Identities = 41/83 (49%), Positives = 57/83 (68%)
 Frame = +1

Query: 7   EVAYHQKELEQHFPQEGWVEQDPYAILAVVKTCIEKAVENLVALGGNPEDIIAVGVTNQR 186
           E+A HQ  + Q  P++GW E +P  +L  V+ C  +A   +  LG   +DI A+G+TNQR
Sbjct: 32  EIASHQIRITQIVPRDGWTEHNPVEVLEAVRLCAVEACHQVEKLGFLVKDIAAIGITNQR 91

Query: 187 ETTIVWEQGTGKPLYNAIVWLDI 255
           ETT+VW++ TG+PLYNAIVW DI
Sbjct: 92  ETTVVWDKNTGEPLYNAIVWNDI 114



 Score = 60.1 bits (139), Expect = 6e-11
 Identities = 29/59 (49%), Positives = 38/59 (64%)
 Frame = +2

Query: 509 TNASRTMLMNIENLNWDPLLLRFFEVPKSVLPDIKSSFRGFTDTLLDGPLKGVPIAGCL 685
           TNASRT+LMNIE L+WDPLL + F V   +LP+I+SS   +        L G+PI+  L
Sbjct: 198 TNASRTLLMNIETLHWDPLLTKTFSVHPDMLPEIRSSSEIYGKVKDSSVLDGIPISAIL 256


>DQ974170-1|ABJ52810.1|  511|Anopheles gambiae serpin 12 protein.
          Length = 511

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -2

Query: 258 FYIQPNNCVVQRFPCALFPNYS 193
           FYI  NN V+Q +   L  NY+
Sbjct: 53  FYIYKNNSVLQAYKDVLEQNYA 74


>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-signaling
            promoter protein.
          Length = 1197

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 14/47 (29%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
 Frame = +3

Query: 294  PNKTRNKNYLKPLCGLPLSPYFSAVK-LRWLSDNVDPVKNAMKKGTC 431
            P  T N+NY+ P    P+S     V+ +R  S  +    N    G+C
Sbjct: 1044 PKGTENENYMVPPSPRPVSEELHLVRGVRLGSGTLVGALNRCSNGSC 1090


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = -3

Query: 464  PYDPTINSTKTTGTLLHGILYRINIVTKPSQLNST 360
            P +   +S  T   LL GI     IVT P+QL +T
Sbjct: 2823 PRNFDFSSPGTWNALLGGIATSAFIVTNPNQLINT 2857


>AJ439353-4|CAD27926.1|  338|Anopheles gambiae putative hox protein
           protein.
          Length = 338

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 9/15 (60%), Positives = 13/15 (86%)
 Frame = +3

Query: 15  IPSKRVRTAFSSRRL 59
           + SKR+RTAF+S +L
Sbjct: 194 LSSKRIRTAFTSTQL 208


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 811,807
Number of Sequences: 2352
Number of extensions: 18214
Number of successful extensions: 88
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 85
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 88
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68995575
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)