Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060759.seq
         (686 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    28   0.062
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   1.8  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    22   5.4  
EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    21   9.5  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    21   9.5  

>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 28.3 bits (60), Expect = 0.062
 Identities = 21/68 (30%), Positives = 27/68 (39%), Gaps = 1/68 (1%)
 Frame = -1

Query: 509 DSLSQSESDCGNGC-GYDCASNYDGGNETWTCACDRNDSCMAMRGDHIAPSEREVPCRPT 333
           D ++     C +G  GY C  N D   +    AC  N +C+   G        E  C P 
Sbjct: 239 DLVNSFSCSCPSGTLGYICEINVD---DCRPGACHNNGTCLDKVGGF------ECKCPPG 289

Query: 332 FVRPSCPG 309
           FV P C G
Sbjct: 290 FVGPRCEG 297


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = -1

Query: 272 RRILYFPCVPISGNVDI 222
           RRI YF CV I+ NV +
Sbjct: 54  RRIYYFYCVSITFNVHL 70


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +3

Query: 360 RWRDMVAPHRHTGVV 404
           RWRD +    H+GVV
Sbjct: 310 RWRDRIYDAIHSGVV 324


>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = +2

Query: 539 LAHDPDTEMSLWCESVP 589
           LA+D +  + +W + VP
Sbjct: 128 LAYDREARVCMWADQVP 144


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = +2

Query: 539 LAHDPDTEMSLWCESVP 589
           LA+D +  + +W + VP
Sbjct: 128 LAYDREARVCMWADQVP 144


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,652
Number of Sequences: 336
Number of extensions: 2637
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18010165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)