Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060755.seq
(692 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1758 - 39681942-39682030,39682115-39682345,39682643-396826... 94 8e-20
01_01_0682 - 5244805-5244919,5246468-5246613,5246813-5246994,524... 83 2e-16
03_02_0758 + 10954268-10954841,10955988-10957145,10957176-109572... 65 4e-11
01_05_0292 + 20518668-20519090,20519213-20519281,20520204-205204... 60 2e-09
01_01_0509 - 3713109-3713244,3713689-3713733,3713959-3714015,371... 58 9e-09
11_06_0767 + 27121761-27123335,27123701-27123910,27124843-271249... 56 2e-08
08_01_0397 - 3509186-3510291,3510322-3512335 55 5e-08
08_01_0353 - 3107628-3107774,3108177-3108213,3108248-3109164,310... 53 2e-07
02_01_0381 - 2764331-2764342,2768966-2769907 44 2e-04
06_03_0287 - 19168685-19168735,19168847-19168884,19169517-191697... 41 0.001
06_03_1255 + 28780181-28781172,28782065-28782932 40 0.002
02_01_0765 - 5694535-5694644,5695039-5696550,5697229-5697390,569... 40 0.002
07_03_1500 + 27001842-27002058,27002144-27002283,27002458-270025... 38 0.008
03_05_0865 - 28365430-28367640 38 0.010
06_03_0674 + 23422004-23422552,23423295-23423369,23424360-234244... 35 0.070
03_06_0365 - 33399422-33399925,33400470-33400583,33400762-334009... 33 0.28
08_02_0671 - 19890187-19890295,19891186-19891320,19891551-198919... 31 0.87
07_01_0725 - 5532803-5533324,5533631-5533657,5534285-5534398,553... 31 0.87
05_01_0079 + 531617-531734,531987-532059,532152-532261,532400-53... 31 0.87
11_06_0300 + 22095396-22096145,22096261-22096344,22097062-220973... 30 1.5
01_01_0602 - 4484972-4485450,4485949-4485997,4486108-4486237,448... 30 2.0
07_02_0023 - 11918735-11918827,11919139-11919231,11919320-119194... 29 2.6
03_02_0189 - 6253659-6255380 29 2.6
02_05_0064 - 25529630-25531440,25531663-25531673,25533113-255331... 29 2.6
01_05_0722 + 24598426-24598649,24599113-24599219,24599319-245993... 29 2.6
06_03_0337 + 19678152-19678484,19678616-19678801,19679232-196794... 29 3.5
03_06_0344 - 33276366-33276548,33277044-33277169,33277254-332773... 29 3.5
09_05_0008 + 20042390-20042845,20043323-20043457,20043539-200436... 29 4.6
09_02_0616 + 11256242-11256430,11256981-11257225,11257317-11257878 29 4.6
03_01_0059 + 484305-484617,484919-485406,485608-486092,486185-48... 29 4.6
01_05_0721 + 24594815-24594834,24595207-24595313,24595417-245954... 29 4.6
01_01_0447 - 3327727-3328144,3328438-3328688,3328820-3328909,332... 29 4.6
04_01_0520 - 6852701-6855028,6855050-6855835,6856085-6856093 28 6.1
11_06_0691 - 26315738-26315848,26315939-26316163,26316249-263166... 28 8.1
03_05_0997 + 29565311-29565664,29566134-29566298,29566572-295666... 28 8.1
01_06_0886 + 32725504-32725824,32725905-32726658,32727911-327280... 28 8.1
>01_06_1758 -
39681942-39682030,39682115-39682345,39682643-39682679,
39683604-39683835,39683937-39684022,39684126-39684218,
39684302-39684465,39684541-39684702,39684783-39684962,
39685079-39685515,39685614-39685669
Length = 588
Score = 94.3 bits (224), Expect = 8e-20
Identities = 41/83 (49%), Positives = 53/83 (63%)
Frame = +2
Query: 260 PDWDSVSLQPFXKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEXNFPD 439
P D SL PF KNFY P V S +V +YR + ++TV G +V P++YF+E NFPD
Sbjct: 106 PKPDFRSLIPFEKNFYVECPAVQAMSDMDVSQYRRQRDITVEGHDVPKPVRYFQEANFPD 165
Query: 440 YVQQGVKTMGYKEPTPIQAQGWP 508
Y Q + G+ EPTPIQ+QGWP
Sbjct: 166 YCMQAIAKSGFVEPTPIQSQGWP 188
Score = 42.3 bits (95), Expect = 4e-04
Identities = 20/49 (40%), Positives = 31/49 (63%)
Frame = +3
Query: 543 QTGSGKTLAYILPAIVHINNQPPISERVMXPIALVXGAXQRVSTNKFQQ 689
QTGSGKTL+Y+LP +VH+ QP + E+ PI L+ + ++ Q+
Sbjct: 201 QTGSGKTLSYLLPGLVHVGAQPRL-EQGDGPIVLILAPTRELAVQIQQE 248
>01_01_0682 -
5244805-5244919,5246468-5246613,5246813-5246994,
5247069-5247295,5247382-5247467,5247564-5247656,
5247964-5248118,5248407-5248490,5248589-5248768,
5249587-5249828,5249927-5249982
Length = 521
Score = 83.0 bits (196), Expect = 2e-16
Identities = 37/80 (46%), Positives = 49/80 (61%)
Frame = +2
Query: 269 DSVSLQPFXKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEXNFPDYVQ 448
D L F KNFY P+V + EVE YR + E+TV G +V P++ F + FP+YV
Sbjct: 44 DLDGLPRFEKNFYVESPSVAGMTEEEVEAYRRRREITVEGRDVPKPVREFRDVGFPEYVL 103
Query: 449 QGVKTMGYKEPTPIQAQGWP 508
Q + G+ EPTPIQ+QGWP
Sbjct: 104 QEITKAGFVEPTPIQSQGWP 123
Score = 45.2 bits (102), Expect = 5e-05
Identities = 23/49 (46%), Positives = 32/49 (65%)
Frame = +3
Query: 543 QTGSGKTLAYILPAIVHINNQPPISERVMXPIALVXGAXQRVSTNKFQQ 689
+TGSGKTLAY+LPAIVH+N QP ++ PI LV + ++ Q+
Sbjct: 136 ETGSGKTLAYLLPAIVHVNAQPILAPG-DGPIVLVLAPTRELAVQIQQE 183
>03_02_0758 +
10954268-10954841,10955988-10957145,10957176-10957216,
10957412-10957448,10957534-10957954,10958201-10958234
Length = 754
Score = 65.3 bits (152), Expect = 4e-11
Identities = 29/82 (35%), Positives = 44/82 (53%)
Frame = +2
Query: 263 DWDSVSLQPFXKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEXNFPDY 442
D ++ +PF K+FY+ P+V S EV +Y + VSG +V PI+ F + FP
Sbjct: 170 DHSTIEYEPFNKDFYEEKPSVSGMSEQEVADYMKSLAIRVSGFDVPRPIKSFADCGFPVQ 229
Query: 443 VQQGVKTMGYKEPTPIQAQGWP 508
+ + GY++PT IQ Q P
Sbjct: 230 LMNAIAKQGYEKPTTIQCQALP 251
Score = 40.3 bits (90), Expect = 0.001
Identities = 19/35 (54%), Positives = 26/35 (74%)
Frame = +3
Query: 543 QTGSGKTLAYILPAIVHINNQPPISERVMXPIALV 647
+TGSGKT A++LP IVHI +QP + E+ PI +V
Sbjct: 264 KTGSGKTAAFVLPMIVHIMDQPEL-EKEEGPIGVV 297
>01_05_0292 +
20518668-20519090,20519213-20519281,20520204-20520473,
20520734-20521084,20521251-20521528,20522755-20523099,
20523346-20523911,20525155-20525528
Length = 891
Score = 59.7 bits (138), Expect = 2e-09
Identities = 25/53 (47%), Positives = 33/53 (62%)
Frame = +2
Query: 350 EEYRNKHEVTVSGVEVHNPIQYFEEXNFPDYVQQGVKTMGYKEPTPIQAQGWP 508
E YR++HE+TV G V PI FE FP + + ++ G+ PTPIQAQ WP
Sbjct: 130 EAYRHRHEITVVGDNVPAPITSFETGGFPPEILKEIQRAGFSSPTPIQAQSWP 182
Score = 31.9 bits (69), Expect = 0.50
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = +3
Query: 543 QTGSGKTLAYILPAIVHI 596
+TGSGKTL Y+LP +HI
Sbjct: 195 KTGSGKTLGYLLPGFMHI 212
>01_01_0509 -
3713109-3713244,3713689-3713733,3713959-3714015,
3714088-3714438,3714585-3714862,3714939-3715289,
3715378-3715647,3716035-3716103,3716194-3716304,
3716503-3716583,3716825-3716914,3717032-3717262
Length = 689
Score = 57.6 bits (133), Expect = 9e-09
Identities = 24/53 (45%), Positives = 31/53 (58%)
Frame = +2
Query: 350 EEYRNKHEVTVSGVEVHNPIQYFEEXNFPDYVQQGVKTMGYKEPTPIQAQGWP 508
E YR KHE+T+ G E P F+ FP + + V+ G+ PTPIQAQ WP
Sbjct: 160 EAYRAKHEITIVGNEAPAPFMTFQSTGFPPEILREVQQAGFSAPTPIQAQSWP 212
>11_06_0767 +
27121761-27123335,27123701-27123910,27124843-27124911,
27125387-27125656,27126027-27126377,27126480-27126757,
27126887-27128330
Length = 1398
Score = 56.4 bits (130), Expect = 2e-08
Identities = 30/87 (34%), Positives = 41/87 (47%), Gaps = 1/87 (1%)
Frame = +2
Query: 251 HGRPDWDSVSLQPFXKNFYDPH-PTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEX 427
H + S++P + F P+ P++ + YR HEVT G V P FE
Sbjct: 555 HNHGPFPEASMRPPSRMFAPPNFPSIAS-----ADAYRQHHEVTAVGENVPPPFMTFEAT 609
Query: 428 NFPDYVQQGVKTMGYKEPTPIQAQGWP 508
FP + Q + G+ PTPIQAQ WP
Sbjct: 610 GFPPEILQEIHAAGFLNPTPIQAQTWP 636
Score = 33.5 bits (73), Expect = 0.16
Identities = 14/32 (43%), Positives = 21/32 (65%), Gaps = 3/32 (9%)
Frame = +3
Query: 543 QTGSGKTLAYILPAIVHI---NNQPPISERVM 629
+TGSGKTL Y++PA +H+ N P + V+
Sbjct: 649 KTGSGKTLGYLIPAFIHLRRYQNNPMLGPTVL 680
>08_01_0397 - 3509186-3510291,3510322-3512335
Length = 1039
Score = 55.2 bits (127), Expect = 5e-08
Identities = 27/82 (32%), Positives = 42/82 (51%)
Frame = +2
Query: 263 DWDSVSLQPFXKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEXNFPDY 442
D + QPF KNFY + K + EV YR + E+ V G +V PI+ + +
Sbjct: 375 DHSKIDYQPFRKNFYIEVKDITKMAAEEVAAYRKQLELKVHGKDVPKPIKTWVQSGLTSK 434
Query: 443 VQQGVKTMGYKEPTPIQAQGWP 508
+ +K +G+++P IQAQ P
Sbjct: 435 LLDTIKKLGFEKPMSIQAQALP 456
Score = 36.7 bits (81), Expect = 0.017
Identities = 13/24 (54%), Positives = 20/24 (83%)
Frame = +3
Query: 543 QTGSGKTLAYILPAIVHINNQPPI 614
+TGSGKTLA++LP + H+ +QP +
Sbjct: 469 KTGSGKTLAFVLPMLRHVKDQPAV 492
>08_01_0353 -
3107628-3107774,3108177-3108213,3108248-3109164,
3109210-3110952
Length = 947
Score = 52.8 bits (121), Expect = 2e-07
Identities = 26/82 (31%), Positives = 40/82 (48%)
Frame = +2
Query: 263 DWDSVSLQPFXKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEXNFPDY 442
D + QPF KN Y + + EV YR E+ V G +V PI+ + +
Sbjct: 236 DHSKIEYQPFRKNLYIEVKDITMMTGEEVATYRKNLELKVHGKDVPKPIKTWVQSGLTSK 295
Query: 443 VQQGVKTMGYKEPTPIQAQGWP 508
+ +K +G+++P PIQAQ P
Sbjct: 296 LLDTIKKLGFEKPMPIQAQALP 317
Score = 39.9 bits (89), Expect = 0.002
Identities = 14/24 (58%), Positives = 21/24 (87%)
Frame = +3
Query: 543 QTGSGKTLAYILPAIVHINNQPPI 614
+TGSGKTLA++LP + H+ +QPP+
Sbjct: 330 KTGSGKTLAFVLPMLRHVKDQPPV 353
>02_01_0381 - 2764331-2764342,2768966-2769907
Length = 317
Score = 43.6 bits (98), Expect = 2e-04
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Frame = +2
Query: 317 PTVLKRSPY-EVEEYRNKHEVTVSGVEVHNPIQYFEEXNFPDYVQQGVKTMGYKEPTPIQ 493
P L+R P + +E R K + V G +V P + F + P+ + + ++ G +PTPIQ
Sbjct: 150 PLRLRRMPRAKADELRRKWHILVDGDDVPPPARDFRDLRLPEPMLRKLREKGIVQPTPIQ 209
Query: 494 AQGWP 508
QG P
Sbjct: 210 VQGLP 214
>06_03_0287 -
19168685-19168735,19168847-19168884,19169517-19169727,
19171461-19171643,19171879-19172028,19172161-19172256,
19172378-19172464,19172535-19172741,19172823-19173047,
19173150-19173261,19173397-19173453,19175522-19176882
Length = 925
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/55 (34%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Frame = +3
Query: 486 PFKLKAGRSYVWKXFSWRTQTGSGKTLAYILPAIVHINNQPPIS-ERVMXPIALV 647
P+ + Y+ K + +TG+GKT+A++LPAI ++ PPI ++ PI++V
Sbjct: 481 PYHVLTSLIYIGKDVLAKAKTGTGKTVAFLLPAIEVVSKLPPIDCDKKRPPISVV 535
>06_03_1255 + 28780181-28781172,28782065-28782932
Length = 619
Score = 39.9 bits (89), Expect = 0.002
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = +2
Query: 317 PTVLKRSPYE-VEEYRNKHEVTVSGVEVHNPIQYFEEXNFPDYVQQGVKTMGYKEPTPIQ 493
P L+R P + R + V G +V P + F + P+ + + ++ G ++PTPIQ
Sbjct: 141 PLRLRRMPRSRADALRRSWHILVDGDDVPPPSRSFGDLRLPEPILRALRGKGIEKPTPIQ 200
Query: 494 AQGWP 508
QG P
Sbjct: 201 VQGLP 205
>02_01_0765 -
5694535-5694644,5695039-5696550,5697229-5697390,
5698015-5698057
Length = 608
Score = 39.5 bits (88), Expect = 0.002
Identities = 17/55 (30%), Positives = 29/55 (52%)
Frame = +2
Query: 344 EVEEYRNKHEVTVSGVEVHNPIQYFEEXNFPDYVQQGVKTMGYKEPTPIQAQGWP 508
++ R+K ++ V G +V +PI F P+ + ++ GY PTP+Q Q P
Sbjct: 160 QIASLRSKLDICVKGEDVPDPIMCFSSSGLPEKLVLNLEAAGYVMPTPVQMQVIP 214
>07_03_1500 +
27001842-27002058,27002144-27002283,27002458-27002549,
27002680-27002776,27002871-27002951,27003031-27003263,
27003876-27004070,27004149-27004239,27004324-27004446,
27004542-27004692,27005060-27005262
Length = 540
Score = 37.9 bits (84), Expect = 0.008
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 4/54 (7%)
Frame = +2
Query: 359 RNKHEVTVSGVEVHNPIQYFEEX----NFPDYVQQGVKTMGYKEPTPIQAQGWP 508
R K ++ +SG V P++ FEE Y+ + +G++EPTPIQ Q P
Sbjct: 125 RKKFDIHISGQNVPAPLENFEELVSRYGCDSYLVGNLSKLGFQEPTPIQRQAIP 178
>03_05_0865 - 28365430-28367640
Length = 736
Score = 37.5 bits (83), Expect = 0.010
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = +3
Query: 543 QTGSGKTLAYILPAIVHINNQPPISE 620
+TGSGKT A++LP + +I PPISE
Sbjct: 360 ETGSGKTAAFVLPMLSYITRLPPISE 385
Score = 34.3 bits (75), Expect = 0.093
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = +2
Query: 356 YRNKHEVTVSGVEVHNPIQYFEEXNFPDYVQQGVKTMGYKEPTPIQAQGWP 508
+R ++ G +V P++ + E + + V+ GYKEP+PIQ P
Sbjct: 297 FREDFNISYKGSKVPRPMRKWSESKLGTELLRAVEKAGYKEPSPIQMASIP 347
>06_03_0674 +
23422004-23422552,23423295-23423369,23424360-23424443,
23424749-23424991,23425348-23425515,23425608-23425727,
23426372-23427016
Length = 627
Score = 34.7 bits (76), Expect = 0.070
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = +2
Query: 374 VTVSGVEVHNPIQYFEEXNFPDYVQQGVKTMGYKEPTPIQAQGWP 508
V VSG +V P FE + V + V GY+ PTP+Q P
Sbjct: 72 VEVSGEDVPPPADGFEAAGLVEAVLRNVARCGYESPTPVQRYSMP 116
>03_06_0365 -
33399422-33399925,33400470-33400583,33400762-33400929,
33401305-33401547,33402148-33402231,33402323-33403098,
33404423-33404636
Length = 700
Score = 32.7 bits (71), Expect = 0.28
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +2
Query: 374 VTVSGVEVHNPIQYFEEXNFPDYVQQGVKTMGYKEPTPIQAQGWP 508
V SG +V P+ F E + D + + ++ Y +PTP+Q P
Sbjct: 225 VETSGHDVPPPVNTFAEIDLGDALNENIRRCKYVKPTPVQRYAIP 269
Score = 30.7 bits (66), Expect = 1.1
Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 4/47 (8%)
Frame = +3
Query: 543 QTGSGKTLAYILPAIVHINN----QPPISERVMXPIALVXGAXQRVS 671
QTGSGKT A+ P I I + Q P R P+AL+ + +S
Sbjct: 282 QTGSGKTAAFCFPIISGIMSSRPPQRPRGSRTAYPLALILSPTRELS 328
>08_02_0671 -
19890187-19890295,19891186-19891320,19891551-19891917,
19892909-19893044,19894924-19894974,19895053-19895134,
19895801-19895853,19895989-19896065,19896234-19896273,
19897666-19897767,19897989-19898031,19898127-19899288,
19899902-19900271
Length = 908
Score = 31.1 bits (67), Expect = 0.87
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +2
Query: 416 FEEXNFPDYVQQGVKTMGYKEPTPIQAQGWP 508
FE + V +GV+ GY+ PTPIQ + P
Sbjct: 28 FESMGLCEEVYRGVRHKGYRVPTPIQRKAMP 58
>07_01_0725 -
5532803-5533324,5533631-5533657,5534285-5534398,
5534564-5534731,5535951-5536193,5537178-5537261,
5537357-5538117,5539637-5539730,5540633-5540899,
5541311-5541316,5542538-5542657
Length = 801
Score = 31.1 bits (67), Expect = 0.87
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = +2
Query: 374 VTVSGVEVHNPIQYFEEXNFPDYVQQGVKTMGYKEPTPIQAQGWP 508
V SG +V P F E + D + + ++ Y +PTP+Q P
Sbjct: 311 VETSGHDVPPPANTFAEIDLGDALNENIRRCKYVKPTPVQRYAIP 355
Score = 30.7 bits (66), Expect = 1.1
Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 4/47 (8%)
Frame = +3
Query: 543 QTGSGKTLAYILPAIVHI--NNQPPIS--ERVMXPIALVXGAXQRVS 671
QTGSGKT A+ P I I + PP S R P+AL+ + +S
Sbjct: 368 QTGSGKTAAFCFPIISGIMRSRPPPRSRGSRTAYPLALILSPTRELS 414
>05_01_0079 +
531617-531734,531987-532059,532152-532261,532400-532543,
532628-532736,532836-533182,533260-533333,533478-533782,
534168-534294,534385-534414,534589-534837
Length = 561
Score = 31.1 bits (67), Expect = 0.87
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +3
Query: 537 RTQTGSGKTLAYILPAIVHINNQPPISERVMXPIALV 647
+ TG+GKTLAY+ P + + + P ER ALV
Sbjct: 67 KAATGTGKTLAYLAPIVHLLQMREPRVERTDGTFALV 103
>11_06_0300 +
22095396-22096145,22096261-22096344,22097062-22097304,
22098535-22098702,22098895-22099008,22099378-22099890
Length = 623
Score = 30.3 bits (65), Expect = 1.5
Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 6/49 (12%)
Frame = +3
Query: 543 QTGSGKTLAYILPAIVHINNQPPISE------RVMXPIALVXGAXQRVS 671
QTGSGKT A+ P I I PP R P+AL+ + +S
Sbjct: 200 QTGSGKTAAFCFPIISGIMRGPPAQRPQRGGMRTACPLALILSPTRELS 248
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = +2
Query: 374 VTVSGVEVHNPIQYFEEXNFPDYVQQGVKTMGYKEPTPIQAQGWP 508
V SG EV P+ F E + + ++ Y PTP+Q P
Sbjct: 143 VETSGREVPPPVGTFAEIDLGQALNDNIRRCKYVRPTPVQRYAIP 187
>01_01_0602 -
4484972-4485450,4485949-4485997,4486108-4486237,
4486636-4486778,4486819-4486877,4487167-4487200,
4487489-4487629,4487719-4487907,4488027-4488122,
4488163-4488225,4488588-4489097
Length = 630
Score = 29.9 bits (64), Expect = 2.0
Identities = 13/22 (59%), Positives = 17/22 (77%), Gaps = 1/22 (4%)
Frame = +3
Query: 540 TQTGSGKTLAYILPAI-VHINN 602
+ TGSGKTLAY+LP + + I N
Sbjct: 154 SHTGSGKTLAYLLPLVQIEIEN 175
>07_02_0023 -
11918735-11918827,11919139-11919231,11919320-11919484,
11920234-11920327,11921012-11921136,11921228-11921313,
11921786-11921864,11923777-11923857,11924153-11924260,
11924870-11924994,11925110-11925530
Length = 489
Score = 29.5 bits (63), Expect = 2.6
Identities = 10/20 (50%), Positives = 17/20 (85%)
Frame = +3
Query: 546 TGSGKTLAYILPAIVHINNQ 605
TGSGKT+A+ +PA++H+ +
Sbjct: 138 TGSGKTIAFGVPALMHVRRK 157
>03_02_0189 - 6253659-6255380
Length = 573
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = +3
Query: 537 RTQTGSGKTLAYILPAIVHI 596
++ TGSGKTLAY+LP + I
Sbjct: 174 QSYTGSGKTLAYLLPILSEI 193
>02_05_0064 -
25529630-25531440,25531663-25531673,25533113-25533198,
25533412-25534259,25535385-25535736
Length = 1035
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = +3
Query: 537 RTQTGSGKTLAYILPAIVHI 596
++ TGSGKTLAY+LP + I
Sbjct: 636 QSYTGSGKTLAYLLPILSEI 655
>01_05_0722 +
24598426-24598649,24599113-24599219,24599319-24599374,
24599469-24599675,24599757-24599963,24600037-24600123,
24600167-24600208,24600209-24600304,24600406-24600621,
24600693-24600875,24601014-24601241
Length = 550
Score = 29.5 bits (63), Expect = 2.6
Identities = 11/24 (45%), Positives = 19/24 (79%)
Frame = +3
Query: 537 RTQTGSGKTLAYILPAIVHINNQP 608
+ +TG+GKT+A++LPAI ++ P
Sbjct: 117 KAKTGTGKTVAFLLPAIELLSTLP 140
>06_03_0337 +
19678152-19678484,19678616-19678801,19679232-19679417,
19680840-19680926,19681045-19681086,19681164-19681253,
19681399-19681503,19681797-19681835,19681914-19682018,
19682463-19682531,19682587-19682736,19683156-19683335
Length = 523
Score = 29.1 bits (62), Expect = 3.5
Identities = 11/15 (73%), Positives = 15/15 (100%)
Frame = +3
Query: 543 QTGSGKTLAYILPAI 587
+TGSGKTLA+++PAI
Sbjct: 131 KTGSGKTLAFLIPAI 145
>03_06_0344 -
33276366-33276548,33277044-33277169,33277254-33277322,
33277401-33277505,33277595-33277633,33277717-33278016,
33278093-33278182,33278271-33278312,33278433-33278516,
33278762-33278947,33279218-33279403,33279663-33280025
Length = 590
Score = 29.1 bits (62), Expect = 3.5
Identities = 11/15 (73%), Positives = 15/15 (100%)
Frame = +3
Query: 543 QTGSGKTLAYILPAI 587
+TGSGKTLA+++PAI
Sbjct: 141 KTGSGKTLAFLIPAI 155
>09_05_0008 +
20042390-20042845,20043323-20043457,20043539-20043679,
20043771-20043882,20044084-20044154,20044251-20044405,
20044484-20044595,20044932-20045033,20045116-20045176,
20045251-20045422,20045512-20045608,20045692-20045786,
20045881-20046014,20046208-20046422
Length = 685
Score = 28.7 bits (61), Expect = 4.6
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +3
Query: 537 RTQTGSGKTLAYILPAIVHINN 602
R +TG GKTLA++LP + + N
Sbjct: 147 RARTGQGKTLAFVLPILESLVN 168
>09_02_0616 + 11256242-11256430,11256981-11257225,11257317-11257878
Length = 331
Score = 28.7 bits (61), Expect = 4.6
Identities = 18/44 (40%), Positives = 19/44 (43%)
Frame = +2
Query: 533 LAYXNGFRQNVGLHLASXCAHK*PTAYFGEGDGSDCFGLXRLXE 664
LA G RQ GLH C H P G SD FGL L +
Sbjct: 178 LAAFRGKRQTFGLHRYPPCRH--PEKVIGISPHSDGFGLTLLLQ 219
>03_01_0059 +
484305-484617,484919-485406,485608-486092,486185-486461,
486495-486626,486721-486893,486982-487204
Length = 696
Score = 28.7 bits (61), Expect = 4.6
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = +3
Query: 543 QTGSGKTLAYILPAIVHINNQ 605
Q+GSGKTLAY+ P + ++ +
Sbjct: 285 QSGSGKTLAYLCPVVQNLRKE 305
>01_05_0721 +
24594815-24594834,24595207-24595313,24595417-24595472,
24595562-24595810,24595871-24596077,24596157-24596243,
24596331-24596426,24596500-24596715,24596908-24597090,
24597222-24597449
Length = 482
Score = 28.7 bits (61), Expect = 4.6
Identities = 11/24 (45%), Positives = 19/24 (79%)
Frame = +3
Query: 537 RTQTGSGKTLAYILPAIVHINNQP 608
+ +TG+GKT+A++LPAI ++ P
Sbjct: 49 KAKTGTGKTVAFLLPAIEVLSALP 72
>01_01_0447 -
3327727-3328144,3328438-3328688,3328820-3328909,
3329061-3329159,3329240-3329353,3329450-3329555,
3329661-3329740,3329913-3330173,3330271-3330507,
3330635-3330922
Length = 647
Score = 28.7 bits (61), Expect = 4.6
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = +3
Query: 546 TGSGKTLAYILPAIVHINNQP 608
TGSGKTLA+++P + + +P
Sbjct: 69 TGSGKTLAFVVPVVEILRRRP 89
>04_01_0520 - 6852701-6855028,6855050-6855835,6856085-6856093
Length = 1040
Score = 28.3 bits (60), Expect = 6.1
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +2
Query: 335 SPYEVEEYRNKHEVTVSGVEVHN 403
SP +EE N E+ V GV++HN
Sbjct: 431 SPQMIEEMNNVRELNVKGVKLHN 453
>11_06_0691 -
26315738-26315848,26315939-26316163,26316249-26316602,
26316681-26316795,26316882-26316925,26317026-26317122,
26317243-26317406,26317499-26317726,26317903-26318222,
26320028-26320136
Length = 588
Score = 27.9 bits (59), Expect = 8.1
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +3
Query: 474 KNRRPFKLKAGRSYVWKXFSWRTQ-TGSGKTLAYILPAIVH 593
K+ RP + +A R+ V ++ TG GK+L Y LPA +H
Sbjct: 185 KSFRPLQYEACRAAVSNMDTFVLMPTGGGKSLCYQLPATLH 225
>03_05_0997 +
29565311-29565664,29566134-29566298,29566572-29566661,
29566763-29566891,29568141-29568272,29568904-29568969,
29569326-29569505,29569664-29569693,29569744-29569839,
29569959-29570096,29571060-29571142,29571447-29571484,
29571568-29571788,29572491-29572538
Length = 589
Score = 27.9 bits (59), Expect = 8.1
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +3
Query: 537 RTQTGSGKTLAYILPAI 587
+ +TGSGKT AY+LP +
Sbjct: 126 KAKTGSGKTFAYLLPML 142
>01_06_0886 +
32725504-32725824,32725905-32726658,32727911-32728033,
32729477-32729535,32731427-32731732,32732006-32732236,
32732332-32732484,32732567-32732836
Length = 738
Score = 27.9 bits (59), Expect = 8.1
Identities = 11/39 (28%), Positives = 21/39 (53%)
Frame = +3
Query: 249 NMDAQIGILFHSNLSXKTFMIHILQFSKDHHMKSKSIEI 365
N+D + H ++ + H+ Q ++DHH K++EI
Sbjct: 647 NLDVTNDPMKHESILGHSSKSHLRQMAEDHHCHLKNVEI 685
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,775,189
Number of Sequences: 37544
Number of extensions: 293744
Number of successful extensions: 771
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 716
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 770
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1768474200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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