Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060754.seq
(683 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_32600| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.50
SB_16217| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.50
SB_7913| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.66
SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.87
SB_9594| Best HMM Match : Extensin_2 (HMM E-Value=0.066) 31 1.1
SB_32583| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_11571| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_51714| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_30707| Best HMM Match : ARID (HMM E-Value=4e-35) 29 2.7
SB_7678| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_48221| Best HMM Match : Caudal_act (HMM E-Value=5) 29 2.7
SB_10763| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_3703| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_48885| Best HMM Match : DUF741 (HMM E-Value=0.88) 29 3.5
SB_31792| Best HMM Match : DUF1373 (HMM E-Value=2.5) 29 3.5
SB_23960| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.6
SB_59679| Best HMM Match : Lectin_C (HMM E-Value=5.3e-10) 28 6.1
SB_55679| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.1
SB_45391| Best HMM Match : DUF1509 (HMM E-Value=1.9) 28 6.1
SB_18330| Best HMM Match : rve (HMM E-Value=1.2e-16) 28 6.1
SB_15142| Best HMM Match : rve (HMM E-Value=1.1e-13) 28 6.1
SB_6077| Best HMM Match : EGF (HMM E-Value=0) 28 6.1
SB_52266| Best HMM Match : DUF1665 (HMM E-Value=1.3) 28 8.1
SB_48634| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
SB_23956| Best HMM Match : AT_hook (HMM E-Value=3.7) 28 8.1
SB_58599| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
SB_57323| Best HMM Match : ShTK (HMM E-Value=0) 28 8.1
SB_32762| Best HMM Match : Extensin_2 (HMM E-Value=0.062) 28 8.1
SB_18606| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
SB_8748| Best HMM Match : Astacin (HMM E-Value=0) 28 8.1
>SB_32600| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1572
Score = 31.9 bits (69), Expect = 0.50
Identities = 19/49 (38%), Positives = 21/49 (42%), Gaps = 2/49 (4%)
Frame = +1
Query: 397 ALHPRENPAGTSSRRHTVSGAQEP--PCAASPPDQQPSTVTPHPAPDSP 537
A HPR P G S R GA P P +P + P TPHP P
Sbjct: 546 APHPRVPPPGASHPRVPPPGAPHPRVPPPGAPHPRVPPPGTPHPRVPPP 594
Score = 31.1 bits (67), Expect = 0.87
Identities = 20/55 (36%), Positives = 25/55 (45%), Gaps = 5/55 (9%)
Frame = +1
Query: 397 ALHPRENPAGTSSRRHTVSGAQEP--PCAASPPDQQPSTVTPH---PAPDSPYGR 546
A HPR P G S +R GA P P +P + P PH P P +P+ R
Sbjct: 406 APHPRVPPPGASHQRVRPPGAPHPRVPPPGAPHPRFPPPGAPHPRVPPPGAPHPR 460
Score = 29.5 bits (63), Expect = 2.7
Identities = 19/55 (34%), Positives = 24/55 (43%), Gaps = 5/55 (9%)
Frame = +1
Query: 397 ALHPRENPAGTSSRRHTVSGAQEP--PCAASPPDQQPSTVTPH---PAPDSPYGR 546
A HPR P G +R GA P P +P + P PH P P +P+ R
Sbjct: 486 APHPRVPPPGAPHQRVPPPGAPHPRVPPPGAPHPRVPPPGAPHPRVPPPGAPHPR 540
Score = 27.9 bits (59), Expect = 8.1
Identities = 20/55 (36%), Positives = 23/55 (41%), Gaps = 5/55 (9%)
Frame = +1
Query: 397 ALHPRENPAGTSSRRHTVSGAQEP--PCAASPPDQQPSTVTPH---PAPDSPYGR 546
A HPR P GT R GA P P +P + P + H P P PY R
Sbjct: 576 APHPRVPPPGTPHPRVPPPGAPHPKVPPPGAPYQRLPYSGAYHPRLPPPGPPYQR 630
>SB_16217| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 587
Score = 31.9 bits (69), Expect = 0.50
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = +1
Query: 406 PRENPAGTSSRRHTVSGAQEPPCAASPPDQQPSTVTPHPAPD 531
PR+ PA + TV + PP ++S P Q+P++ T P+ +
Sbjct: 185 PRQAPAAKTHSSSTVPRSGSPPVSSSRPAQKPTSQTALPSTE 226
>SB_7913| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 336
Score = 31.5 bits (68), Expect = 0.66
Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Frame = +2
Query: 419 PQERRLGDTP*AVHRSHLAPPHHRTN---SRVXSPRTRH 526
P+ RR +P RS PHHR++ SR SPR RH
Sbjct: 231 PRRRRRSRSPRRRRRSRSPSPHHRSHRSRSRSRSPRRRH 269
>SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1272
Score = 31.1 bits (67), Expect = 0.87
Identities = 24/89 (26%), Positives = 36/89 (40%), Gaps = 2/89 (2%)
Frame = +2
Query: 257 RRANTCPAERLPTKPYQAPPLRLHETHGTAQCAPKSPSPVPILLIGRHSIPGKIPQERRL 436
R+ P R P P R +++ ++ SP+P P R S P+ RR
Sbjct: 877 RKRYDSPPRRRRRSPSPPPRRRRRDSYSPSRRRRDSPTPSPPPRRRRKSPSPSPPRRRRR 936
Query: 437 --GDTP*AVHRSHLAPPHHRTNSRVXSPR 517
++P + S L PP + S SPR
Sbjct: 937 SPSNSPPPMRSSPLPPPQRKRASTPPSPR 965
>SB_9594| Best HMM Match : Extensin_2 (HMM E-Value=0.066)
Length = 361
Score = 30.7 bits (66), Expect = 1.1
Identities = 20/63 (31%), Positives = 28/63 (44%), Gaps = 7/63 (11%)
Frame = +1
Query: 367 VAGTHPVNR--TALHPRENPAGTSSRRHT----VSGAQEPPCAASPPDQQPSTVTP-HPA 525
+ HP + TA+HP +P T H+ V PP A P P+TV P H
Sbjct: 98 LTAVHPCHSPPTAVHPCHSPPNTVRPCHSPPTAVRPCHSPPTAVRPCHSPPNTVRPCHSP 157
Query: 526 PDS 534
P++
Sbjct: 158 PNT 160
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/49 (34%), Positives = 22/49 (44%), Gaps = 4/49 (8%)
Frame = +1
Query: 394 TALHPRENPAGTSSRRHT----VSGAQEPPCAASPPDQQPSTVTPHPAP 528
TA+HP +P T H+ V PP A P P+TV P +P
Sbjct: 79 TAVHPCHSPPNTVRPCHSPLTAVHPCHSPPTAVHPCHSPPNTVRPCHSP 127
>SB_32583| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 526
Score = 30.3 bits (65), Expect = 1.5
Identities = 21/64 (32%), Positives = 26/64 (40%)
Frame = +2
Query: 290 PTKPYQAPPLRLHETHGTAQCAPKSPSPVPILLIGRHSIPGKIPQERRLGDTP*AVHRSH 469
PT Y P LH H A SP P P ++I H + P P ++HR H
Sbjct: 22 PTPCYGITPHPLHRHH-LPPPATASP-PTPCIVIISHPLHRHHPPPPASSSFPHSLHRHH 79
Query: 470 LAPP 481
PP
Sbjct: 80 PPPP 83
>SB_11571| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 469
Score = 30.3 bits (65), Expect = 1.5
Identities = 17/60 (28%), Positives = 26/60 (43%)
Frame = +1
Query: 349 VRAEVAVAGTHPVNRTALHPRENPAGTSSRRHTVSGAQEPPCAASPPDQQPSTVTPHPAP 528
V A + + + P N AL P + P+ T + T P +PP +Q + PH P
Sbjct: 39 VSASASSSTSRPTN--ALQPLKPPSNTPQQLTTPPHQSNTPRPLTPPSRQSNNPRPHTPP 96
>SB_51714| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 542
Score = 29.5 bits (63), Expect = 2.7
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +1
Query: 430 SSRRHTVSGAQEPPCA-ASPPDQQPSTVTPHPAPDS 534
++RR+ +Q+P SPP +QP+T P P P++
Sbjct: 476 NTRRNPPPPSQDPTTGNPSPPQEQPTTGNPTPPPNN 511
>SB_30707| Best HMM Match : ARID (HMM E-Value=4e-35)
Length = 1338
Score = 29.5 bits (63), Expect = 2.7
Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 5/60 (8%)
Frame = +1
Query: 370 AGTHPVNRTALHPRENPAGTSSRRHTVSGAQEPPCAASP-----PDQQPSTVTPHPAPDS 534
AG ++ L R +P G SR T S A A +P P+ +PST P P+S
Sbjct: 329 AGPKKPDKLILPDRSSPTGKPSRVPTPSKATPSKRATTPNNKGKPNSKPSTPNQPPTPES 388
>SB_7678| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1432
Score = 29.5 bits (63), Expect = 2.7
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Frame = +3
Query: 420 RRNVVSETHRERCTGATLRRLTTGPTAEYXHPA-PGTRQPLR-EMNGSFAPVPPTSAF 587
+ + VS + R T PT+ Y P PG+ + + EMN F+ +PP S+F
Sbjct: 373 KNSYVSTVMQRRDMDITKTNFHQHPTSVYQEPVYPGSSRTVPLEMNKCFSSLPPVSSF 430
>SB_48221| Best HMM Match : Caudal_act (HMM E-Value=5)
Length = 317
Score = 29.5 bits (63), Expect = 2.7
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Frame = +3
Query: 420 RRNVVSETHRERCTGATLRRLTTGPTAEYXHPA-PGTRQPLR-EMNGSFAPVPPTSAF 587
+ + VS + R T PT+ Y P PG+ + + EMN F+ +PP S+F
Sbjct: 87 KNSYVSTVMQRRDMDITKTNFHQHPTSVYQEPVYPGSSRTVPLEMNKCFSSLPPVSSF 144
>SB_10763| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 260
Score = 29.5 bits (63), Expect = 2.7
Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 9/69 (13%)
Frame = +1
Query: 355 AEVAVAGTHPVNRT---ALHPRENPAGTSSRRHTVSGAQE------PPCAASPPDQQPST 507
AE A G+ P +T A P A T++ + + A++ P A+SP QP+
Sbjct: 77 AEAAAVGSSPAAKTPSSASSPSSATAATTAGKPVAAAAKDLPEVRKPATASSPAPSQPAA 136
Query: 508 VTPHPAPDS 534
TP A S
Sbjct: 137 ATPSDAAAS 145
>SB_3703| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 930
Score = 29.5 bits (63), Expect = 2.7
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Frame = +3
Query: 420 RRNVVSETHRERCTGATLRRLTTGPTAEYXHPA-PGTRQPLR-EMNGSFAPVPPTSAF 587
+ + VS + R T PT+ Y P PG+ + + EMN F+ +PP S+F
Sbjct: 768 KNSYVSTVMQRRDMDITKTNFHQHPTSVYQEPVYPGSSRTVPLEMNKCFSSLPPVSSF 825
>SB_48885| Best HMM Match : DUF741 (HMM E-Value=0.88)
Length = 841
Score = 29.1 bits (62), Expect = 3.5
Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 3/40 (7%)
Frame = +1
Query: 433 SRRHTVSGAQEPPCAASPPDQQPST---VTPHPAPDSPYG 543
S+ VSG+Q PP +S P PS V+P AP G
Sbjct: 584 SQAPAVSGSQSPPLTSSTPPMNPSNPIHVSPVAAPPGSSG 623
>SB_31792| Best HMM Match : DUF1373 (HMM E-Value=2.5)
Length = 696
Score = 29.1 bits (62), Expect = 3.5
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = +1
Query: 424 GTSSRRHTVSGAQEPPCAASPPDQQPSTVTPHPAP 528
G SS H++ G +P A QQP T P P P
Sbjct: 411 GDSSLLHSLLGQPDPLSWAQQELQQPQTAQPQPLP 445
Score = 27.9 bits (59), Expect = 8.1
Identities = 27/90 (30%), Positives = 36/90 (40%), Gaps = 1/90 (1%)
Frame = +2
Query: 266 NTCPAERLPTKPYQAPPLRLHETHGTAQCAPKSPSPVPILLIGRHSIP-GKIPQERRLGD 442
+T P+ L + P ++ + +P SPSPV + RHSIP G P
Sbjct: 447 DTLPSSSLFSSPADPLTALGYQDQISQALSPVSPSPVVVPGQARHSIPLGPQPAYGGSDL 506
Query: 443 TP*AVHRSHLAPPHHRTNSRVXSPRTRHPT 532
P RSH H R + R R PT
Sbjct: 507 LPYEDRRSHYL-RHRRPHRRRFRYRPDTPT 535
>SB_23960| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 103
Score = 29.1 bits (62), Expect = 3.5
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 5/79 (6%)
Frame = +2
Query: 251 LKRRANTCPAERLPTKPYQAPPLRLHETHGTAQ---CAPKSPSP--VPILLIGRHSIPGK 415
+K R C +L K A LR H Q C+ + S +P++ +G H I
Sbjct: 3 VKPRVFQCYRAQLSMKDISAISLRQHYQRKLPQLPECSARKRSTRCMPVVELGFHGIILG 62
Query: 416 IPQERRLGDTP*AVHRSHL 472
+P+ + L DTP + SH+
Sbjct: 63 LPKRQTLQDTPGNLCDSHV 81
>SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1870
Score = 28.7 bits (61), Expect = 4.6
Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 3/50 (6%)
Frame = +1
Query: 397 ALHPRENPAGTSSR---RHTVSGAQEPPCAASPPDQQPSTVTPHPAPDSP 537
A + R NP S R + G P PP + P TVTP P+ D+P
Sbjct: 1625 ARYVRINPTSWESSICLRAEIYGCPVTPPTTDPP-RPPVTVTPKPSTDAP 1673
Score = 27.9 bits (59), Expect = 8.1
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = +1
Query: 466 PPCAASPPDQQPSTVTPHPAPDSP 537
PP PP +P TP P P +P
Sbjct: 1362 PPTPPRPPTPRPRPPTPRPGPPTP 1385
>SB_59679| Best HMM Match : Lectin_C (HMM E-Value=5.3e-10)
Length = 849
Score = 28.3 bits (60), Expect = 6.1
Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = +2
Query: 263 ANTCPAERLPTKPYQAPPLRLHET-HGTAQCAPKSPSP 373
A+TC PT +Q P + +G + CAP +P P
Sbjct: 285 ASTCTTACSPTCCFQTPSYTPYSACYGASPCAPPTPKP 322
>SB_55679| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 203
Score = 28.3 bits (60), Expect = 6.1
Identities = 13/46 (28%), Positives = 19/46 (41%)
Frame = +1
Query: 403 HPRENPAGTSSRRHTVSGAQEPPCAASPPDQQPSTVTPHPAPDSPY 540
HP +P S+ + + EPP S P Q + P +PY
Sbjct: 24 HPLLHPVHLSTTLYYIQSISEPPLTTSSPSQYHPLLHPVHLSTTPY 69
>SB_45391| Best HMM Match : DUF1509 (HMM E-Value=1.9)
Length = 402
Score = 28.3 bits (60), Expect = 6.1
Identities = 15/56 (26%), Positives = 20/56 (35%)
Frame = +1
Query: 379 HPVNRTALHPRENPAGTSSRRHTVSGAQEPPCAASPPDQQPSTVTPHPAPDSPYGR 546
+P + T + P +SG + P P P P P SPYGR
Sbjct: 205 YPYSNTVARSQNRPGAPPLLNSLLSGNRPTPQTEDNPGPPPVYPPNPPEPYSPYGR 260
>SB_18330| Best HMM Match : rve (HMM E-Value=1.2e-16)
Length = 997
Score = 28.3 bits (60), Expect = 6.1
Identities = 18/43 (41%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Frame = +1
Query: 412 ENPAGTSSRR-HTVSGAQEPPCAASPPDQQPSTVTPHPAPDSP 537
E GT+ RR H Q+ P SP DQ P V P PD P
Sbjct: 915 ETDDGTTLRRNHADIWMQQTP---SPEDQSPVPVATVPGPDPP 954
>SB_15142| Best HMM Match : rve (HMM E-Value=1.1e-13)
Length = 442
Score = 28.3 bits (60), Expect = 6.1
Identities = 13/26 (50%), Positives = 17/26 (65%), Gaps = 2/26 (7%)
Frame = +1
Query: 421 AGTSSRRHTVSGAQE--PPCAASPPD 492
A +SR + S +E PPC+ASPPD
Sbjct: 104 ADATSRHPSQSNTEEKAPPCSASPPD 129
>SB_6077| Best HMM Match : EGF (HMM E-Value=0)
Length = 1165
Score = 28.3 bits (60), Expect = 6.1
Identities = 19/50 (38%), Positives = 20/50 (40%)
Frame = -1
Query: 542 P*GLSGAGCGVTVLGCWSGGEAAQGGSCAPLTVCLRDDVPAGFSRGWSAV 393
P G +G C V V C A G SC L R PAGF AV
Sbjct: 584 PRGFTGTLCDVNVDEC-EDSPCANGASCEDLINDFRCHCPAGFQGRTCAV 632
>SB_52266| Best HMM Match : DUF1665 (HMM E-Value=1.3)
Length = 697
Score = 27.9 bits (59), Expect = 8.1
Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
Frame = +1
Query: 382 PVNR--TALHPREN-PAGTSSRRHTVSGAQEPPCAASPPDQQPSTVTPHPA 525
P NR +A +EN P G + +R VS P A PP P+ P+PA
Sbjct: 251 PSNRPVSAYEQKENIPVGENKQR-PVSANNAPTPAWQPPRPMPAWAPPNPA 300
>SB_48634| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1066
Score = 27.9 bits (59), Expect = 8.1
Identities = 12/48 (25%), Positives = 21/48 (43%)
Frame = +1
Query: 379 HPVNRTALHPRENPAGTSSRRHTVSGAQEPPCAASPPDQQPSTVTPHP 522
HP + + P NP+ S + + + +P + SP +V P P
Sbjct: 550 HPSSNPSSEPSPNPSSNPSSDPSPNPSSDPSLSFSPSSSSSPSVRPSP 597
>SB_23956| Best HMM Match : AT_hook (HMM E-Value=3.7)
Length = 240
Score = 27.9 bits (59), Expect = 8.1
Identities = 15/55 (27%), Positives = 21/55 (38%)
Frame = +1
Query: 373 GTHPVNRTALHPRENPAGTSSRRHTVSGAQEPPCAASPPDQQPSTVTPHPAPDSP 537
G+HPV T + PA + + A P ++ PD P P P P
Sbjct: 158 GSHPVIPTECNQTVPPAEPVAETPPTTQANNDPVSSCMPDASSQAPQPLPEPKRP 212
>SB_58599| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 616
Score = 27.9 bits (59), Expect = 8.1
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = +1
Query: 466 PPCAASPPDQQPSTVTPHPAPDSP 537
PP A +PP PS TP P PD P
Sbjct: 412 PPSARTPPVCPPSASTP-PVPDVP 434
>SB_57323| Best HMM Match : ShTK (HMM E-Value=0)
Length = 911
Score = 27.9 bits (59), Expect = 8.1
Identities = 15/41 (36%), Positives = 17/41 (41%), Gaps = 1/41 (2%)
Frame = +1
Query: 418 PAGTSSRRHTVSGAQEPPCAASPPDQQPSTVTP-HPAPDSP 537
P T S V +P C PD QP T P PD+P
Sbjct: 678 PQTTVSPGTPVPPTDDPDCTTETPDTQPPTQPPVTQPPDTP 718
>SB_32762| Best HMM Match : Extensin_2 (HMM E-Value=0.062)
Length = 830
Score = 27.9 bits (59), Expect = 8.1
Identities = 16/51 (31%), Positives = 23/51 (45%)
Frame = +1
Query: 388 NRTALHPRENPAGTSSRRHTVSGAQEPPCAASPPDQQPSTVTPHPAPDSPY 540
NRT + P + T + + P A SPP+ PS P+ AP P+
Sbjct: 279 NRTEIPPLSSLIATHNHSPPNTAPSPPNIAPSPPNIAPS--PPNTAPSPPH 327
>SB_18606| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1401
Score = 27.9 bits (59), Expect = 8.1
Identities = 15/49 (30%), Positives = 21/49 (42%)
Frame = +2
Query: 233 LTGDYDLKRRANTCPAERLPTKPYQAPPLRLHETHGTAQCAPKSPSPVP 379
L G +RANT E + ++H GT P+ P+PVP
Sbjct: 930 LEGVLSATQRANTSQVEGAVRSRTSSRRSQVHSLDGTLATIPELPTPVP 978
>SB_8748| Best HMM Match : Astacin (HMM E-Value=0)
Length = 757
Score = 27.9 bits (59), Expect = 8.1
Identities = 26/97 (26%), Positives = 35/97 (36%), Gaps = 2/97 (2%)
Frame = +1
Query: 370 AGTHPVNRTALHPRENPAGTSSRRHTVSGAQEPPCAASPPDQQPST--VTPHPAPDSPYG 543
A T+P TA AGTS +V A P + +PP P++ TP P S
Sbjct: 531 ASTNPTPTTA-----ETAGTSGAPTSVPPASSAPASGAPPSGAPASGATTPTTGPISGAP 585
Query: 544 R*TGAXXXXXXXXXXXXXXXXGDPTSLSRSFSLXETP 654
G +PT+ S + S TP
Sbjct: 586 ASNGPTSGSTGANQPTSGSTSANPTTSSATGSQPSTP 622
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,640,562
Number of Sequences: 59808
Number of extensions: 497305
Number of successful extensions: 2186
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1702
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2134
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1769412099
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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