Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060754.seq
         (683 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    27   0.73 
X95912-1|CAA65156.1|  696|Anopheles gambiae immune factor protein.     26   1.3  
AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.            26   1.3  
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    25   2.2  
AF393487-1|AAL60412.1|  304|Anopheles gambiae odorant binding pr...    25   2.2  
AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.           25   2.9  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    25   2.9  
U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic aci...    23   9.0  
AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.        23   9.0  

>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskeletal
            structural protein protein.
          Length = 1645

 Score = 26.6 bits (56), Expect = 0.73
 Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
 Frame = +1

Query: 412  ENPAGTSSRRHTVSGAQEPPCAAS---PPDQQPSTVTP 516
            +N A +S ++   SG ++ P  A+   PP Q P T+TP
Sbjct: 1443 QNEAKSSYQQQPDSGTEQAPREATAQLPPVQPPETLTP 1480


>X95912-1|CAA65156.1|  696|Anopheles gambiae immune factor protein.
          Length = 696

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
 Frame = +1

Query: 406 PRENPAGTSSRRHTVSGAQEPPCAASP---PDQQPSTVTPHPAPDSP 537
           P ++P+   S ++ +   Q    A S    PD+ P+T+TP P    P
Sbjct: 415 PGDSPSHNPSNQYQLQPMQPMFTAQSTSPGPDRSPATLTPSPGIGGP 461


>AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.
          Length = 1152

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +1

Query: 466  PPCAASPPDQQPSTVTPHPAP 528
            PP   +PP +  S+ TP P P
Sbjct: 1085 PPALTTPPTEPISSATPAPGP 1105


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 25.0 bits (52), Expect = 2.2
 Identities = 16/56 (28%), Positives = 22/56 (39%)
 Frame = +2

Query: 371 PVPILLIGRHSIPGKIPQERRLGDTP*AVHRSHLAPPHHRTNSRVXSPRTRHPTAP 538
           PVP   + +   P    Q++  G +    H  H   PHH       SPR  +P  P
Sbjct: 157 PVPWYQLPQQQQPSSYHQQQHPGHSQ-HHHHHHHHHPHHSQQQHSASPRC-YPMPP 210


>AF393487-1|AAL60412.1|  304|Anopheles gambiae odorant binding
           protein 1 protein.
          Length = 304

 Score = 25.0 bits (52), Expect = 2.2
 Identities = 15/51 (29%), Positives = 21/51 (41%), Gaps = 1/51 (1%)
 Frame = +2

Query: 287 LPTKPYQAPPLRLHETHGTAQCAPKSPSPVPIL-LIGRHSIPGKIPQERRL 436
           L T P   P  +LH T     C    P P  +L    +  +P  +P+ R L
Sbjct: 141 LVTCPQYVPATKLHATQAALDCLTVLPVPTDLLQCYSKGDLP-DVPETRCL 190


>AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.
          Length = 753

 Score = 24.6 bits (51), Expect = 2.9
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +1

Query: 451 SGAQEPPCAASPPDQQPSTVTPHPAPDS 534
           +G + PP +   P QQPS   P P+  S
Sbjct: 275 NGLRAPPSSQQQPQQQPSQ-QPQPSSQS 301


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 24.6 bits (51), Expect = 2.9
 Identities = 11/35 (31%), Positives = 13/35 (37%)
 Frame = +1

Query: 424 GTSSRRHTVSGAQEPPCAASPPDQQPSTVTPHPAP 528
           G   R  +  G Q PP    PP  +P      P P
Sbjct: 243 GMQPRPPSAQGMQRPPMMGQPPPIRPPNPMGGPRP 277


>U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic acid
           binding protein protein.
          Length = 388

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 10/24 (41%), Positives = 14/24 (58%), Gaps = 1/24 (4%)
 Frame = +1

Query: 472 CAASPPDQQPST-VTPHPAPDSPY 540
           CAAS P+   +T +   PAP  P+
Sbjct: 162 CAASSPNAYTNTTIAVQPAPTQPH 185


>AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.
          Length = 615

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +3

Query: 474 RRLTTGPTAEYXHPAPGTRQPLR 542
           RR+ +G  +    PAPG+R  +R
Sbjct: 21  RRIVSGLDSTRGSPAPGSRHSIR 43


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 717,526
Number of Sequences: 2352
Number of extensions: 16541
Number of successful extensions: 43
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68995575
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)