Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060754.seq
(683 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68753-3|CAA92988.3| 984|Caenorhabditis elegans Hypothetical pr... 32 0.44
Z81463-4|CAB03852.2| 3118|Caenorhabditis elegans Hypothetical pr... 29 2.3
U40413-4|AAM51516.1| 699|Caenorhabditis elegans Hypothetical pr... 29 2.3
U40413-3|AAK39176.1| 673|Caenorhabditis elegans Hypothetical pr... 29 2.3
AL132949-22|CAB70112.2| 603|Caenorhabditis elegans Hypothetical... 29 2.3
AL034393-6|CAA22321.1| 507|Caenorhabditis elegans Hypothetical ... 29 2.3
AL032637-15|CAA21616.2| 370|Caenorhabditis elegans Hypothetical... 29 3.1
AL021492-1|CAA16377.1| 179|Caenorhabditis elegans Hypothetical ... 29 3.1
AF039043-1|AAB94194.1| 5105|Caenorhabditis elegans Hypothetical ... 29 3.1
AC024801-12|AAF59643.4| 569|Caenorhabditis elegans Hypothetical... 29 4.1
Z83114-7|CAJ76943.1| 525|Caenorhabditis elegans Hypothetical pr... 28 5.4
Z83114-6|CAB63235.1| 589|Caenorhabditis elegans Hypothetical pr... 28 5.4
U13646-1|AAC24418.2| 2585|Caenorhabditis elegans Hypothetical pr... 28 5.4
AF016669-1|AAB66098.3| 1758|Caenorhabditis elegans Signal elemen... 28 5.4
Z98866-26|CAM33505.1| 559|Caenorhabditis elegans Hypothetical p... 28 7.1
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 28 7.1
U20861-3|AAA62295.1| 283|Caenorhabditis elegans Hypothetical pr... 28 7.1
Z99281-37|CAJ44244.1| 740|Caenorhabditis elegans Hypothetical p... 27 9.4
Z81479-1|CAB03944.1| 1043|Caenorhabditis elegans Hypothetical pr... 27 9.4
Z50872-5|CAI46559.1| 71|Caenorhabditis elegans Hypothetical pr... 27 9.4
AY611485-1|AAT37524.1| 740|Caenorhabditis elegans epidermal gro... 27 9.4
AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical ... 27 9.4
AC024136-6|AAF35965.3| 425|Caenorhabditis elegans Hypothetical ... 27 9.4
AC006663-2|AAF39900.2| 603|Caenorhabditis elegans Hypothetical ... 27 9.4
>Z68753-3|CAA92988.3| 984|Caenorhabditis elegans Hypothetical
protein ZC518.2 protein.
Length = 984
Score = 31.9 bits (69), Expect = 0.44
Identities = 19/61 (31%), Positives = 26/61 (42%)
Frame = +1
Query: 364 AVAGTHPVNRTALHPRENPAGTSSRRHTVSGAQEPPCAASPPDQQPSTVTPHPAPDSPYG 543
A+A P A P P T S + ++ + P AA PP Q P P +S YG
Sbjct: 155 ALASARPAPFPAAQPPPAPTPTPSYQQQMAPRPQAP-AAYPPASQQQGYPPQPQQNSQYG 213
Query: 544 R 546
+
Sbjct: 214 Q 214
>Z81463-4|CAB03852.2| 3118|Caenorhabditis elegans Hypothetical protein
C06B8.7 protein.
Length = 3118
Score = 29.5 bits (63), Expect = 2.3
Identities = 13/44 (29%), Positives = 22/44 (50%)
Frame = +3
Query: 219 TSPNFSQETTT*KGARTLAPQNDYRLNPIKPHHSDSTKPTVPHS 350
T P +Q TTT T +P N R+ P +P ++ T+ ++
Sbjct: 2971 THPTVTQTTTTVPYRSTSSPNNHVRMRPYQPRSDTASNATLSYT 3014
>U40413-4|AAM51516.1| 699|Caenorhabditis elegans Hypothetical
protein C18B2.5b protein.
Length = 699
Score = 29.5 bits (63), Expect = 2.3
Identities = 16/37 (43%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Frame = +1
Query: 409 RENPAGTSSRRHTVSGA-QEPPCAASPPDQQPSTVTP 516
RE P G R H S PP A S P P VTP
Sbjct: 48 REVPIGNGIRSHATSTVVSHPPHAVSAPPPPPVNVTP 84
>U40413-3|AAK39176.1| 673|Caenorhabditis elegans Hypothetical
protein C18B2.5a protein.
Length = 673
Score = 29.5 bits (63), Expect = 2.3
Identities = 16/37 (43%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Frame = +1
Query: 409 RENPAGTSSRRHTVSGA-QEPPCAASPPDQQPSTVTP 516
RE P G R H S PP A S P P VTP
Sbjct: 48 REVPIGNGIRSHATSTVVSHPPHAVSAPPPPPVNVTP 84
>AL132949-22|CAB70112.2| 603|Caenorhabditis elegans Hypothetical
protein Y53F4B.25 protein.
Length = 603
Score = 29.5 bits (63), Expect = 2.3
Identities = 21/75 (28%), Positives = 33/75 (44%), Gaps = 3/75 (4%)
Frame = +2
Query: 284 RLPTKPYQAPPLRLHETHGTAQCAPKSPSPVPILLIGRHSIPGK---IPQERRLGDTP*A 454
R P +P+Q PPL H++ T + P+P +H IP PQ+ + P
Sbjct: 226 RFPAQPWQIPPLHPHQS--TPNPLTQFFQPIP-----QHLIPPPNPFFPQQHQTWTPPTL 278
Query: 455 VHRSHLAPPHHRTNS 499
+ + + PP R S
Sbjct: 279 LQPNPIPPPPQRNES 293
>AL034393-6|CAA22321.1| 507|Caenorhabditis elegans Hypothetical
protein Y18D10A.8 protein.
Length = 507
Score = 29.5 bits (63), Expect = 2.3
Identities = 14/24 (58%), Positives = 15/24 (62%)
Frame = +1
Query: 466 PPCAASPPDQQPSTVTPHPAPDSP 537
PP A SPP Q S+VT P P SP
Sbjct: 140 PPSATSPPTQVTSSVT-SPVPSSP 162
>AL032637-15|CAA21616.2| 370|Caenorhabditis elegans Hypothetical
protein Y43F8C.16 protein.
Length = 370
Score = 29.1 bits (62), Expect = 3.1
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Frame = +1
Query: 427 TSSRRHTVS--GAQEPPCAASPPDQQPSTVTPHPAPDS 534
TS R T++ G+ PP ++ P ST TP P+ S
Sbjct: 279 TSDRTSTITSTGSSNPPSTSTVPSTTTSTTTPKPSSPS 316
>AL021492-1|CAA16377.1| 179|Caenorhabditis elegans Hypothetical
protein Y45F10D.2 protein.
Length = 179
Score = 29.1 bits (62), Expect = 3.1
Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 4/65 (6%)
Frame = +1
Query: 364 AVAGTHPVNR---TALHPRENPAGTSSRRHTVSGAQEPPCAASP-PDQQPSTVTPHPAPD 531
A A T P+N+ T++ R+ S+ T S P +SP P QQPST P+ +
Sbjct: 100 AQASTIPMNQGSSTSMPVRQKRQAVSTTTTTAS----PMSTSSPTPSQQPSTTQPYGTDE 155
Query: 532 SPYGR 546
Y R
Sbjct: 156 EFYAR 160
>AF039043-1|AAB94194.1| 5105|Caenorhabditis elegans Hypothetical
protein F39C12.1 protein.
Length = 5105
Score = 29.1 bits (62), Expect = 3.1
Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = +1
Query: 382 PVNRTAL-HPRENPAGTSSRRHTVSGAQEPPCAASPPDQQPSTVTPHPAPDSP 537
P+ T L + R+N G + + Q+ P SPP ++ TP P P P
Sbjct: 2784 PLKNTWLTNTRKNSKGEKKVKENTAPVQQAPVPVSPPREE----TPEPTPSPP 2832
>AC024801-12|AAF59643.4| 569|Caenorhabditis elegans Hypothetical
protein Y50D7A.8 protein.
Length = 569
Score = 28.7 bits (61), Expect = 4.1
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = +1
Query: 427 TSSRRHTVSGAQEPPCAASPPDQQPST-VTPHPAPDS 534
T + +S EP ++ PP QQPST T P P S
Sbjct: 421 TDDPYNNLSTINEPSSSSLPPPQQPSTSSTTEPVPPS 457
>Z83114-7|CAJ76943.1| 525|Caenorhabditis elegans Hypothetical
protein K09B11.5b protein.
Length = 525
Score = 28.3 bits (60), Expect = 5.4
Identities = 12/40 (30%), Positives = 18/40 (45%)
Frame = +1
Query: 409 RENPAGTSSRRHTVSGAQEPPCAASPPDQQPSTVTPHPAP 528
R +P +++ HTV PP + P Q P + P P
Sbjct: 456 RPSPPSHTAKSHTVKSPMTPPVSQPPVSQPPVSQPPVSQP 495
>Z83114-6|CAB63235.1| 589|Caenorhabditis elegans Hypothetical
protein K09B11.5a protein.
Length = 589
Score = 28.3 bits (60), Expect = 5.4
Identities = 12/40 (30%), Positives = 18/40 (45%)
Frame = +1
Query: 409 RENPAGTSSRRHTVSGAQEPPCAASPPDQQPSTVTPHPAP 528
R +P +++ HTV PP + P Q P + P P
Sbjct: 520 RPSPPSHTAKSHTVKSPMTPPVSQPPVSQPPVSQPPVSQP 559
>U13646-1|AAC24418.2| 2585|Caenorhabditis elegans Hypothetical protein
ZK783.1 protein.
Length = 2585
Score = 28.3 bits (60), Expect = 5.4
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -3
Query: 195 SPSSSQEAPESDITRSVTPLDRVSVNGFPSVKK 97
SP+SS APE T + + D V +G PS K
Sbjct: 1293 SPTSSATAPEVPTTSASSTPDAVEESGIPSTSK 1325
>AF016669-1|AAB66098.3| 1758|Caenorhabditis elegans Signal element
on autosome protein2 protein.
Length = 1758
Score = 28.3 bits (60), Expect = 5.4
Identities = 17/60 (28%), Positives = 25/60 (41%)
Frame = +1
Query: 379 HPVNRTALHPRENPAGTSSRRHTVSGAQEPPCAASPPDQQPSTVTPHPAPDSPYGR*TGA 558
HP + HP + + +SS + Q PP A+ P Q H YG+ TG+
Sbjct: 14 HPSSSHHHHPGQQQSSSSSSSSHLQDFQSPPSASHPYYHQQQPQHQHQQAQQ-YGQATGS 72
>Z98866-26|CAM33505.1| 559|Caenorhabditis elegans Hypothetical
protein Y49E10.29 protein.
Length = 559
Score = 27.9 bits (59), Expect = 7.1
Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
Frame = +1
Query: 382 PVNRTALHPRENPAGTSSRRHTVSGAQE--PPCAASPPDQQPSTVTPHPAPDSP 537
PV + P +PA + + V+ Q PP + S P Q P+T T + P
Sbjct: 409 PVQQNPPKPTPSPAPPAQKAQPVTQQQASAPPTSPSAPVQAPNTPTQKASSQDP 462
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 27.9 bits (59), Expect = 7.1
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = -1
Query: 536 GLSGAGCGVTVLGCWSGGEAAQGGSCAP 453
G G GCG GC GG GG CAP
Sbjct: 86 GGGGGGCGGGGGGCGGGGGC--GGGCAP 111
>U20861-3|AAA62295.1| 283|Caenorhabditis elegans Hypothetical
protein C28H8.7 protein.
Length = 283
Score = 27.9 bits (59), Expect = 7.1
Identities = 15/31 (48%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Frame = +2
Query: 77 KKNPFFFFLTLGNPFTDTRSR-GVTDRVMSD 166
KK PF F +T+GN +TD+R+R +TD + +D
Sbjct: 116 KKEPFVF-VTIGN-YTDSRTRKNMTDELPTD 144
>Z99281-37|CAJ44244.1| 740|Caenorhabditis elegans Hypothetical
protein Y57G11C.24h protein.
Length = 740
Score = 27.5 bits (58), Expect = 9.4
Identities = 16/34 (47%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Frame = +2
Query: 443 TP*AVHRSHLAPPHHRTNSRVXSPRTRH--PTAP 538
TP +HR H APP H R PR R+ TAP
Sbjct: 464 TPNQIHRGHSAPPEH---FRQPPPRERNMVDTAP 494
>Z81479-1|CAB03944.1| 1043|Caenorhabditis elegans Hypothetical
protein C34F6.1 protein.
Length = 1043
Score = 27.5 bits (58), Expect = 9.4
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +1
Query: 427 TSSRRHTVSGAQEPPCAASPPDQQPSTVTPHPAPDS 534
T+++ T + E P S P PS P PAP++
Sbjct: 126 TTTQPPTTTTTLETPAPESTPSMAPSHTDPTPAPET 161
>Z50872-5|CAI46559.1| 71|Caenorhabditis elegans Hypothetical
protein C05D12.7 protein.
Length = 71
Score = 27.5 bits (58), Expect = 9.4
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = +2
Query: 380 ILLIGRHSIPGKIPQERRLGDTP*AVHRSHLAPPHHRTNSRVXSPRTRHPT 532
+L + R+S+ ++ + D A+ HLAPP NS SPR + PT
Sbjct: 1 MLEVRRNSLVRQMAFRQDSNDAELAIRHGHLAPP----NSIPDSPRPQKPT 47
>AY611485-1|AAT37524.1| 740|Caenorhabditis elegans epidermal growth
factor receptorpathway substrate 8 splice variant B
protein.
Length = 740
Score = 27.5 bits (58), Expect = 9.4
Identities = 16/34 (47%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Frame = +2
Query: 443 TP*AVHRSHLAPPHHRTNSRVXSPRTRH--PTAP 538
TP +HR H APP H R PR R+ TAP
Sbjct: 464 TPNQIHRGHSAPPEH---FRQPPPRERNMVDTAP 494
>AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical
protein ZC123.1 protein.
Length = 730
Score = 27.5 bits (58), Expect = 9.4
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = +1
Query: 415 NPAGTSSRRHTVSGAQEPPCAASPPDQQPSTVTPHPAPDSP 537
NP G + + PP A+PP P P PAP++P
Sbjct: 118 NPGGVPAPPNPPRTCCPPPTPAAPPPPPP---PPPPAPEAP 155
>AC024136-6|AAF35965.3| 425|Caenorhabditis elegans Hypothetical
protein F54A3.1 protein.
Length = 425
Score = 27.5 bits (58), Expect = 9.4
Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +1
Query: 394 TALHPRENPAGTSSRRHT-VSGAQEPPCAASPPDQQPSTVTPHPAP 528
T+ P+ AG R + V+ + PP +A+P + PS P AP
Sbjct: 221 TSAPPKTTAAGAPKRPSSAVAPRRAPPASAAPTRRAPSPKAPVVAP 266
>AC006663-2|AAF39900.2| 603|Caenorhabditis elegans Hypothetical
protein H24K24.4 protein.
Length = 603
Score = 27.5 bits (58), Expect = 9.4
Identities = 11/37 (29%), Positives = 18/37 (48%)
Frame = +2
Query: 263 ANTCPAERLPTKPYQAPPLRLHETHGTAQCAPKSPSP 373
A P+E +P P APP ++ A ++P+P
Sbjct: 396 APAAPSEPIPDDPSDAPPAKIPRIEPEPTAADEAPAP 432
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,547,088
Number of Sequences: 27780
Number of extensions: 362605
Number of successful extensions: 1454
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1165
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1433
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1560745544
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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