Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060754.seq
(683 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g15410.1 68417.m02355 UBX domain-containing protein low simil... 33 0.18
At3g24540.1 68416.m03082 protein kinase family protein contains ... 33 0.18
At3g22120.1 68416.m02792 protease inhibitor/seed storage/lipid t... 33 0.18
At2g15880.1 68415.m01820 leucine-rich repeat family protein / ex... 32 0.41
At1g31810.1 68414.m03904 formin homology 2 domain-containing pro... 31 0.54
At5g51590.1 68418.m06396 DNA-binding protein-related contains Pf... 30 1.2
At4g15200.1 68417.m02329 formin homology 2 domain-containing pro... 30 1.2
At3g60280.1 68416.m06738 uclacyanin 3 (UCC3) identical to uclacy... 30 1.2
At2g29210.1 68415.m03550 splicing factor PWI domain-containing p... 30 1.2
At1g10620.1 68414.m01204 protein kinase family protein contains ... 30 1.6
At5g63310.1 68418.m07945 nucleotide diphosphate kinase II, chlor... 29 2.2
At5g48920.1 68418.m06052 hydroxyproline-rich glycoprotein family... 29 2.2
At4g25360.1 68417.m03649 expressed protein 29 2.2
At1g15130.1 68414.m01807 hydroxyproline-rich glycoprotein family... 29 2.2
At5g25820.1 68418.m03064 exostosin family protein contains Pfam ... 29 2.9
At4g38770.1 68417.m05490 proline-rich family protein (PRP4) simi... 29 2.9
At3g24550.1 68416.m03083 protein kinase family protein contains ... 29 2.9
At2g44790.1 68415.m05574 uclacyanin II strong similarity to ucla... 29 2.9
At5g56890.1 68418.m07099 protein kinase family protein contains ... 29 3.8
At5g53870.1 68418.m06701 plastocyanin-like domain-containing pro... 29 3.8
At5g38560.1 68418.m04662 protein kinase family protein contains ... 29 3.8
At3g19020.1 68416.m02415 leucine-rich repeat family protein / ex... 29 3.8
At3g01560.1 68416.m00086 proline-rich family protein contains pr... 29 3.8
At2g14890.2 68415.m01692 arabinogalactan-protein (AGP9) identica... 29 3.8
At2g14890.1 68415.m01693 arabinogalactan-protein (AGP9) identica... 29 3.8
At4g11380.1 68417.m01835 beta-adaptin, putative strong similarit... 28 5.0
At2g27260.1 68415.m03276 expressed protein 28 5.0
At1g68725.1 68414.m07853 arabinogalactan-protein, putative (AGP1... 28 5.0
At1g48100.1 68414.m05368 glycoside hydrolase family 28 protein /... 28 5.0
At1g26150.1 68414.m03192 protein kinase family protein similar t... 28 5.0
At5g10430.1 68418.m01209 arabinogalactan-protein (AGP4) identica... 28 6.6
At2g04190.1 68415.m00404 meprin and TRAF homology domain-contain... 28 6.6
At1g56530.1 68414.m06501 hydroxyproline-rich glycoprotein family... 28 6.6
At1g34360.1 68414.m04266 translation initiation factor 3 (IF-3) ... 28 6.6
At1g20130.1 68414.m02518 family II extracellular lipase, putativ... 28 6.6
At5g65390.1 68418.m08224 arabinogalactan-protein (AGP7) 27 8.8
At5g25970.1 68418.m03089 hypothetical protein contains Pfam prof... 27 8.8
At3g60270.1 68416.m06737 uclacyanin, putative similar to uclacya... 27 8.8
At1g70460.1 68414.m08107 protein kinase, putative contains Pfam ... 27 8.8
At1g21310.1 68414.m02662 proline-rich extensin-like family prote... 27 8.8
>At4g15410.1 68417.m02355 UBX domain-containing protein low
similarity to XY40 protein [Rattus norvegicus]
GI:2547025; contains Pfam profile PF00789: UBX domain
Length = 421
Score = 33.1 bits (72), Expect = 0.18
Identities = 19/54 (35%), Positives = 24/54 (44%)
Frame = +1
Query: 364 AVAGTHPVNRTALHPRENPAGTSSRRHTVSGAQEPPCAASPPDQQPSTVTPHPA 525
A T N A NP G T++GAQ P + S PD PS +P P+
Sbjct: 37 AAVSTFLDNDAAAAAEPNPTGPPPPSSTIAGAQSPSQSHS-PDYTPSETSPSPS 89
>At3g24540.1 68416.m03082 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 509
Score = 33.1 bits (72), Expect = 0.18
Identities = 24/63 (38%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Frame = +1
Query: 382 PVNRTALHPRENPAGTSSRRHTVSGAQEPPCAASPPDQQPSTVTPHP----APDSPYGR* 549
PVN +L P P S+ G + PP ASP Q+P+T T P +P SP
Sbjct: 64 PVN-VSLSPPPPPRSPSTSTPPRLGNRNPPPPASPSGQEPTTPTMTPGFSLSPPSPSRLS 122
Query: 550 TGA 558
TGA
Sbjct: 123 TGA 125
>At3g22120.1 68416.m02792 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to
SP|Q00451|PRF1_LYCES 36.4 kDa proline-rich protein
Lycopersicon esculentum, proline-rich cell wall protein
[Medicago sativa] GI:3818416; contains Pfam profile
PF00234 Protease inhibitor/seed storage/LTP family
Length = 334
Score = 33.1 bits (72), Expect = 0.18
Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 6/47 (12%)
Frame = +1
Query: 406 PRENPAGTSSRRHTVSGAQEP------PCAASPPDQQPSTVTPHPAP 528
P+ +PA +H V + P P A PP +P TV PHP P
Sbjct: 30 PKPSPAPHKPPKHPVKPPKPPAVKPPKPPAVKPPTPKPPTVKPHPKP 76
Score = 28.3 bits (60), Expect = 5.0
Identities = 14/53 (26%), Positives = 17/53 (32%)
Frame = +1
Query: 379 HPVNRTALHPRENPAGTSSRRHTVSGAQEPPCAASPPDQQPSTVTPHPAPDSP 537
HP T HP P +PP P +P T P P+ P
Sbjct: 101 HPKPPTKPHPHPKPPIVKPPTKPPPSTPKPPTKPPPSTPKPPTTKPPPSTPKP 153
>At2g15880.1 68415.m01820 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 727
Score = 31.9 bits (69), Expect = 0.41
Identities = 24/71 (33%), Positives = 32/71 (45%), Gaps = 4/71 (5%)
Frame = +2
Query: 338 GTAQCAP-KSPSPVPILLIGRHSIPGKIPQER-RLGDTP*AVHRSHLAP--PHHRTNSRV 505
G++Q P KSPSPVP + + P + PQ +P RS P PHH
Sbjct: 388 GSSQATPSKSPSPVPTRPVHKPQPPKESPQPNDPYNQSPVKFRRSPPPPQQPHHHV-VHS 446
Query: 506 XSPRTRHPTAP 538
P + PT+P
Sbjct: 447 PPPASSPPTSP 457
Score = 29.9 bits (64), Expect = 1.6
Identities = 16/47 (34%), Positives = 21/47 (44%)
Frame = +1
Query: 382 PVNRTALHPRENPAGTSSRRHTVSGAQEPPCAASPPDQQPSTVTPHP 522
P N++ + R +P H V PP A+SPP P TP P
Sbjct: 421 PYNQSPVKFRRSPPPPQQPHHHV--VHSPPPASSPPTSPPVHSTPSP 465
>At1g31810.1 68414.m03904 formin homology 2 domain-containing
protein / FH2 domain-containing protein low similarity
to SP|P48608 Diaphanous protein {Drosophila
melanogaster}; contains Pfam profile PF02181: Formin
Homology 2(FH2) Domain
Length = 1201
Score = 31.5 bits (68), Expect = 0.54
Identities = 17/52 (32%), Positives = 22/52 (42%)
Frame = +1
Query: 382 PVNRTALHPRENPAGTSSRRHTVSGAQEPPCAASPPDQQPSTVTPHPAPDSP 537
P+N+T P P SR AQ PP PP P + P+P +P
Sbjct: 567 PINKTPPPPPPPPPPLPSRSIPPPLAQPPPPRPPPPPPPPPSSRSIPSPSAP 618
>At5g51590.1 68418.m06396 DNA-binding protein-related contains Pfam
domain PF03479: Domain of unknown function (DUF296),
found in AT-hook motifs Pfam:PF02178
Length = 419
Score = 30.3 bits (65), Expect = 1.2
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Frame = +3
Query: 501 EYXHPAPGTRQPLREMNGSFAPV---PPTSAFFAVKPKRGSHFPFALLQPXGNAMNQXRK 671
++ P P P R N + PV +SA AVKP PF+L P N+ ++ +K
Sbjct: 20 QHETPLPPPGYPPRSENPNLFPVGQSSTSSAAAAVKPSENVAPPFSLTMPVENSSSELKK 79
>At4g15200.1 68417.m02329 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 600
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = +1
Query: 457 AQEPPCAASPPDQQPSTVTPHPAPDSP 537
A PP AA+PP Q P P P P P
Sbjct: 264 APPPPPAAAPPPQPPPPPPPKPQPPPP 290
>At3g60280.1 68416.m06738 uclacyanin 3 (UCC3) identical to
uclacyanin 3 GI:3395770 from [Arabidopsis thaliana];
contains Pfam profile PF02298: Plastocyanin-like domain;
identical to cDNA uclacyanin 3 (UCC3)GI:3395769
Length = 222
Score = 30.3 bits (65), Expect = 1.2
Identities = 19/62 (30%), Positives = 25/62 (40%), Gaps = 2/62 (3%)
Frame = +1
Query: 349 VRAEVAVAGTHPVNRTALHPRENPAGTSSRRHTVSGAQEPPCAASPPDQQ--PSTVTPHP 522
++ V V P T P P+ SS T S PP SPP PS++ P
Sbjct: 112 MKLAVPVLAAAPSPSTPSSPPSTPSTPSSPPSTPSTPSSPPSPPSPPSPSLPPSSLPPSA 171
Query: 523 AP 528
+P
Sbjct: 172 SP 173
>At2g29210.1 68415.m03550 splicing factor PWI domain-containing
protein contains Pfam profile PF01480: PWI domain
Length = 878
Score = 30.3 bits (65), Expect = 1.2
Identities = 27/99 (27%), Positives = 43/99 (43%), Gaps = 10/99 (10%)
Frame = +2
Query: 275 PAERLPTKPYQ----APPLRLHETHGTAQCAPKSPSPVPILLIGRHSIPGKIPQERRLGD 442
PA+RLP+ P + P+R+ +H +SPSP + GR + P RR
Sbjct: 475 PAQRLPSPPPRRAGLPSPMRIGGSHAANHL--ESPSPSSLSPPGRKKVLPSPPVRRRRSL 532
Query: 443 TP*AVHRS------HLAPPHHRTNSRVXSPRTRHPTAPT 541
TP S H +P H + + + R R ++P+
Sbjct: 533 TPDEERVSLSQGGRHTSPSHIKQDGSMSPVRGRGKSSPS 571
>At1g10620.1 68414.m01204 protein kinase family protein contains
serine/threonine protein kinases active-site signature,
PROSITE:PS00108
Length = 718
Score = 29.9 bits (64), Expect = 1.6
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = +1
Query: 466 PPCAASPPDQQPSTVTPHPAPDS 534
P AA PP QP TP P P S
Sbjct: 62 PATAAQPPPNQPPNTTPPPTPPS 84
>At5g63310.1 68418.m07945 nucleotide diphosphate kinase II,
chloroplast (NDPK2) identical to SP|O64903 Nucleoside
diphosphate kinase II, chloroplast precursor (NDK II)
(NDP kinase II) (NDPK II) (NDPK Ia) [Arabidopsis
thaliana]; contains Pfam PF00334 : Nucleoside
diphosphate kinase domain; contains Pfam profile
PF00334: Nucleoside diphosphate kinase
Length = 231
Score = 29.5 bits (63), Expect = 2.2
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +1
Query: 445 TVSGAQEPPCAASPPDQQPSTVTPHPAP 528
TV P C ASPP++ +++ PH +P
Sbjct: 5 TVVSKWTPLCVASPPERNSASLNPHCSP 32
>At5g48920.1 68418.m06052 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 205
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = +1
Query: 466 PPCAASPPDQQPSTVTPHPAPDSP 537
PP SPP Q P + PHP P P
Sbjct: 45 PPPHFSPPHQPPPSPYPHPHPPPP 68
>At4g25360.1 68417.m03649 expressed protein
Length = 533
Score = 29.5 bits (63), Expect = 2.2
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +1
Query: 427 TSSRRHTVSGAQEPPCAASPPDQQPSTVTPHPAPD 531
+ R VS A++ P A+SPPD T + P D
Sbjct: 142 SGERETNVSKAEDTPSASSPPDDVSETASAEPECD 176
>At1g15130.1 68414.m01807 hydroxyproline-rich glycoprotein family
protein
Length = 846
Score = 29.5 bits (63), Expect = 2.2
Identities = 19/46 (41%), Positives = 24/46 (52%), Gaps = 4/46 (8%)
Frame = +1
Query: 421 AGTSSRRHTVSG---AQEPPCAASPPDQQPSTVTP-HPAPDSPYGR 546
+G S + H SG + P A+SPP P T P HP P +PY R
Sbjct: 723 SGLSFQDHRSSGPYPSVHQPTASSPPPP-PETQNPSHPHPHAPYYR 767
>At5g25820.1 68418.m03064 exostosin family protein contains Pfam
profile: PF03016 exostosin family
Length = 654
Score = 29.1 bits (62), Expect = 2.9
Identities = 18/41 (43%), Positives = 20/41 (48%)
Frame = +3
Query: 528 RQPLREMNGSFAPVPPTSAFFAVKPKRGSHFPFALLQPXGN 650
++PL M G A P AFFA KP G P LL GN
Sbjct: 474 KKPLSNMGGKSANQRPILAFFAGKPDHGYLRPI-LLSYWGN 513
>At4g38770.1 68417.m05490 proline-rich family protein (PRP4) similar
to proline-rich protein [Arabidopsis thaliana]
gi|6782442|gb|AAF28388; contains proline-rich extensin
domains, INTERPRO:IPR002965
Length = 448
Score = 29.1 bits (62), Expect = 2.9
Identities = 15/48 (31%), Positives = 21/48 (43%)
Frame = +2
Query: 275 PAERLPTKPYQAPPLRLHETHGTAQCAPKSPSPVPILLIGRHSIPGKI 418
P + P K PP+ +H+ C PK P P+ + H P KI
Sbjct: 295 PKKPCPPKKVDPPPVPVHKPPTKKPCPPKKVDPPPVPV---HKPPPKI 339
>At3g24550.1 68416.m03083 protein kinase family protein contains
Pfam domain PF00069: Protein kinase domain
Length = 652
Score = 29.1 bits (62), Expect = 2.9
Identities = 19/48 (39%), Positives = 21/48 (43%)
Frame = +1
Query: 394 TALHPRENPAGTSSRRHTVSGAQEPPCAASPPDQQPSTVTPHPAPDSP 537
TA P P+ + T S PP AAS P P T TP P SP
Sbjct: 3 TAPSPGTTPSPSPPSPPTNSTTTTPPPAASSP---PPTTTPSSPPPSP 47
>At2g44790.1 68415.m05574 uclacyanin II strong similarity to
uclacyanin II GI:3399769 from [Arabidopsis thaliana];
contains Pfam profile PF02298: Plastocyanin-like domain;
identical to cDNA uclacyanin II GI:3399768
Length = 202
Score = 29.1 bits (62), Expect = 2.9
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = +1
Query: 403 HPRENPAGTSSRRHTVSGAQEPPCAASPPDQQPSTVTPHPAPDS 534
H R N G + V+G+ PP +PP P T T +P S
Sbjct: 111 HCRTN-GGMKLAVNVVAGSAGPPATPTPPSSTPGTPTTPESPPS 153
>At5g56890.1 68418.m07099 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 1113
Score = 28.7 bits (61), Expect = 3.8
Identities = 15/44 (34%), Positives = 18/44 (40%)
Frame = +1
Query: 406 PRENPAGTSSRRHTVSGAQEPPCAASPPDQQPSTVTPHPAPDSP 537
P P+ RH+ P PPD PS V HP+ SP
Sbjct: 300 PSIAPSAPKFNRHS---HHTSPSTTPPPDSTPSNVHHHPSSPSP 340
>At5g53870.1 68418.m06701 plastocyanin-like domain-containing
protein contains similarity to SP|Q02917 Early nodulin
55-2 precursor {Glycine max}; PF02298: Plastocyanin-like
domain
Length = 370
Score = 28.7 bits (61), Expect = 3.8
Identities = 14/49 (28%), Positives = 23/49 (46%)
Frame = +1
Query: 391 RTALHPRENPAGTSSRRHTVSGAQEPPCAASPPDQQPSTVTPHPAPDSP 537
R+++ P + P +S HT + + + SP PS +P P SP
Sbjct: 173 RSSVSPAQPPKSSSPISHTPALSPSHATSHSPATPSPSPKSPSPVSHSP 221
>At5g38560.1 68418.m04662 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 681
Score = 28.7 bits (61), Expect = 3.8
Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +1
Query: 406 PRENPAGTSSRRHTVSGAQEPPCA-ASPPDQQPSTVTPHP 522
P +P +S TV+ + PP ASPP P+T P P
Sbjct: 70 PPPSPPVITSPPPTVASSPPPPVVIASPPPSTPATTPPAP 109
Score = 27.5 bits (58), Expect = 8.8
Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = +1
Query: 418 PAGTSSRRHTVSGAQEPPCA-ASPPDQQPSTVTPHPAPDS 534
P SS V A PP A+ P P TV+P P PD+
Sbjct: 82 PTVASSPPPPVVIASPPPSTPATTPPAPPQTVSPPPPPDA 121
>At3g19020.1 68416.m02415 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 956
Score = 28.7 bits (61), Expect = 3.8
Identities = 14/44 (31%), Positives = 20/44 (45%)
Frame = +1
Query: 406 PRENPAGTSSRRHTVSGAQEPPCAASPPDQQPSTVTPHPAPDSP 537
P++ + H S +EP SP + P T P P P+SP
Sbjct: 443 PQQPSPKPETPSHEPSNPKEPK-PESPKQESPKTEQPKPKPESP 485
Score = 27.5 bits (58), Expect = 8.8
Identities = 13/42 (30%), Positives = 17/42 (40%)
Frame = +1
Query: 412 ENPAGTSSRRHTVSGAQEPPCAASPPDQQPSTVTPHPAPDSP 537
E+P S + E P SP + P P P P+SP
Sbjct: 466 ESPKQESPKTEQPKPKPESPKQESPKQEAPKPEQPKPKPESP 507
>At3g01560.1 68416.m00086 proline-rich family protein contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 511
Score = 28.7 bits (61), Expect = 3.8
Identities = 13/26 (50%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = +1
Query: 463 EPPCAASPPDQQPSTVTPH-PAPDSP 537
+PP + PP Q P T TPH P+ SP
Sbjct: 294 QPPPSNPPPYQAPQTQTPHQPSYQSP 319
>At2g14890.2 68415.m01692 arabinogalactan-protein (AGP9) identical
to gi|10880495|gb|AAG24277
Length = 176
Score = 28.7 bits (61), Expect = 3.8
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +1
Query: 466 PPCAASPPDQQPSTVTPHPAP 528
PP A+ PP P TP PAP
Sbjct: 95 PPVASPPPATPPPVATPPPAP 115
Score = 27.5 bits (58), Expect = 8.8
Identities = 11/27 (40%), Positives = 12/27 (44%)
Frame = +1
Query: 457 AQEPPCAASPPDQQPSTVTPHPAPDSP 537
A PP +SPP P TP P P
Sbjct: 68 ANPPPPVSSPPPASPPPATPPPVASPP 94
>At2g14890.1 68415.m01693 arabinogalactan-protein (AGP9) identical
to gi|10880495|gb|AAG24277
Length = 191
Score = 28.7 bits (61), Expect = 3.8
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +1
Query: 466 PPCAASPPDQQPSTVTPHPAP 528
PP A+ PP P TP PAP
Sbjct: 95 PPVASPPPATPPPVATPPPAP 115
Score = 27.5 bits (58), Expect = 8.8
Identities = 11/27 (40%), Positives = 12/27 (44%)
Frame = +1
Query: 457 AQEPPCAASPPDQQPSTVTPHPAPDSP 537
A PP +SPP P TP P P
Sbjct: 68 ANPPPPVSSPPPASPPPATPPPVASPP 94
>At4g11380.1 68417.m01835 beta-adaptin, putative strong similarity
to SP|Q10567 Adapter-related protein complex 1 beta 1
subunit (Beta-adaptin 1) [Homo sapiens], beta-adaptin
[Drosophila melanogaster] GI:434902; contains Pfam
profile: PF01602 Adaptin N terminal region
Length = 894
Score = 28.3 bits (60), Expect = 5.0
Identities = 14/37 (37%), Positives = 16/37 (43%)
Frame = +1
Query: 421 AGTSSRRHTVSGAQEPPCAASPPDQQPSTVTPHPAPD 531
AG SS S A P P +QP+ P P PD
Sbjct: 604 AGYSSSNPVDSAASPPGNIPQPSGRQPAPAVPAPVPD 640
>At2g27260.1 68415.m03276 expressed protein
Length = 243
Score = 28.3 bits (60), Expect = 5.0
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +3
Query: 492 PTAEYXHPAPGTRQPLREMNGSFAPVP 572
PT Y +PA GT P + N +AP P
Sbjct: 26 PTNGYPNPAAGTAYPYQNHNPYYAPQP 52
>At1g68725.1 68414.m07853 arabinogalactan-protein, putative (AGP19)
non-consensus splice site at the intron:exon boundary
(AT:exon)
Length = 247
Score = 28.3 bits (60), Expect = 5.0
Identities = 14/26 (53%), Positives = 15/26 (57%)
Frame = +1
Query: 460 QEPPCAASPPDQQPSTVTPHPAPDSP 537
Q PP AS P P V+P PAP SP
Sbjct: 102 QSPP--ASAPTVSPPPVSPPPAPTSP 125
>At1g48100.1 68414.m05368 glycoside hydrolase family 28 protein /
polygalacturonase (pectinase) family protein similar to
polygalacturonase PG1 GI:5669846, PG2 GI:5669848 from
[Glycine max]; contains PF00295: Glycosyl hydrolases
family 28 (polygalacturonases)
Length = 475
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = +1
Query: 442 HTVSGAQEPPC-AASPPDQQPSTVTPHPAPDSPYG 543
H + PP A+PPDQ PS P+P+PD G
Sbjct: 40 HPLPPPPPPPLETANPPDQVPS--DPYPSPDPAPG 72
>At1g26150.1 68414.m03192 protein kinase family protein similar to
Pto kinase interactor 1 GI:3668069 from [Lycopersicon
esculentum]
Length = 760
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/45 (33%), Positives = 16/45 (35%)
Frame = +1
Query: 403 HPRENPAGTSSRRHTVSGAQEPPCAASPPDQQPSTVTPHPAPDSP 537
HP P G RR SPP S HP+P SP
Sbjct: 216 HPSPPPPGHPKRREQPPPPGSKRPTPSPPSPSDSKRPVHPSPPSP 260
>At5g10430.1 68418.m01209 arabinogalactan-protein (AGP4) identical
to gi_3883126_gb_AAC77826
Length = 135
Score = 27.9 bits (59), Expect = 6.6
Identities = 14/40 (35%), Positives = 15/40 (37%)
Frame = +1
Query: 406 PRENPAGTSSRRHTVSGAQEPPCAASPPDQQPSTVTPHPA 525
P P T A PP A PP P+ TP PA
Sbjct: 24 PAPTPTATPPPATPPPVATPPPVATPPPAATPAPATPPPA 63
>At2g04190.1 68415.m00404 meprin and TRAF homology domain-containing
protein / MATH domain-containing protein similar to
ubiquitin-specific protease 12 [Arabidopsis thaliana]
GI:11993471; contains Pfam profile PF00917: MATH domain
Length = 411
Score = 27.9 bits (59), Expect = 6.6
Identities = 14/25 (56%), Positives = 15/25 (60%)
Frame = +1
Query: 85 PFFFFFNAGESIYGYPVEGGNGPGY 159
P FFF AG GY GG+GPGY
Sbjct: 65 PGFFFGGAGPGP-GYGGGGGHGPGY 88
>At1g56530.1 68414.m06501 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965;
Length = 185
Score = 27.9 bits (59), Expect = 6.6
Identities = 13/44 (29%), Positives = 19/44 (43%)
Frame = +1
Query: 406 PRENPAGTSSRRHTVSGAQEPPCAASPPDQQPSTVTPHPAPDSP 537
P + T++ T Q PP + PP+ P P+P SP
Sbjct: 127 PPHHRRTTAAAGTTTIAGQPPPPESPPPESLPPPSPESPSPPSP 170
>At1g34360.1 68414.m04266 translation initiation factor 3 (IF-3)
family protein low similarity to Translation initiation
factor IF-3 from [subsp. Schizaphis graminum] {Buchnera
aphidicola} SP|P46243, {Salmonella typhimurium}
SP|P33321; contains Pfam profiles PF05198: Translation
initiation factor IF-3 N-terminal domain, PF00707:
Translation initiation factor IF-3 C-terminal domain
Length = 520
Score = 27.9 bits (59), Expect = 6.6
Identities = 15/44 (34%), Positives = 19/44 (43%)
Frame = +1
Query: 406 PRENPAGTSSRRHTVSGAQEPPCAASPPDQQPSTVTPHPAPDSP 537
P + P+G S RH P P+QQP T P P +P
Sbjct: 436 PNQQPSGPSPNRHPDRQGPPPRFQNQAPNQQP-TGRFEPQPPNP 478
>At1g20130.1 68414.m02518 family II extracellular lipase, putative
contains Pfam profile PF00657: GDSL-like
Lipase/Acylhydrolase; similar to EXL3 (PMID:11431566)
Length = 1006
Score = 27.9 bits (59), Expect = 6.6
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = +1
Query: 469 PCAASPPDQQPSTVTPHPAPDSP 537
PC + PP QP V P P +P
Sbjct: 50 PCPSPPPKPQPKPVPPPACPPTP 72
>At5g65390.1 68418.m08224 arabinogalactan-protein (AGP7)
Length = 130
Score = 27.5 bits (58), Expect = 8.8
Identities = 14/41 (34%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Frame = +1
Query: 418 PAGTSSRRHTVSGAQEPPCAASP-PDQQPSTVTPHPAPDSP 537
P T T + PP A SP P P + P P+ D+P
Sbjct: 36 PVATPPPAATPAPTTTPPPAVSPAPTSSPPSSAPSPSSDAP 76
>At5g25970.1 68418.m03089 hypothetical protein contains Pfam profile
PF03267: Arabidopsis protein of unknown function, DUF266
Length = 436
Score = 27.5 bits (58), Expect = 8.8
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = -3
Query: 354 AHCAVPWVSWSRSGGA**GLVGSRSAG-QVFARLFKS*SPVRNWGR*RTSALLFSPSSSQ 178
A+ +V WV WSR GGA G++ + FAR+ K + N G + LF+ S
Sbjct: 363 ANRSVTWVDWSR-GGAHPATFGAQDINEEFFARILKGDNCTYNGGY-TSMCYLFARKFSP 420
Query: 177 EAPE 166
A E
Sbjct: 421 SALE 424
>At3g60270.1 68416.m06737 uclacyanin, putative similar to uclacyanin
3 GI:3395770 from [Arabidopsis thaliana]; contains Pfam
profile PF02298: Plastocyanin-like domain
Length = 187
Score = 27.5 bits (58), Expect = 8.8
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +1
Query: 463 EPPCAASPPDQQPSTVTPHPAPDSP 537
EPP + S P PS +P P+ SP
Sbjct: 127 EPPPSPSAPSPSPSAPSPSPSAPSP 151
>At1g70460.1 68414.m08107 protein kinase, putative contains Pfam
PF00069: Protein kinase domain
Length = 710
Score = 27.5 bits (58), Expect = 8.8
Identities = 16/42 (38%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Frame = +1
Query: 418 PAGTSSRRHTVSGAQEPPCAASPPDQQPSTVTPH--PAPDSP 537
P S TVS PP +SPP T P P PD+P
Sbjct: 55 PPAVFSPPPTVSSPPPPPLDSSPPPPPDLTPPPSSPPPPDAP 96
>At1g21310.1 68414.m02662 proline-rich extensin-like family protein
contains extensin-like region, Pfam:PF04554
Length = 431
Score = 27.5 bits (58), Expect = 8.8
Identities = 19/66 (28%), Positives = 29/66 (43%)
Frame = +2
Query: 290 PTKPYQAPPLRLHETHGTAQCAPKSPSPVPILLIGRHSIPGKIPQERRLGDTP*AVHRSH 469
P + PP + H + + K SP P+ HS P P+E+ + +P H
Sbjct: 359 PPVYHSPPPPKKHYVYKSPPPPVKHYSPPPVY----HSPPP--PKEKYVYKSPPPPPVHH 412
Query: 470 LAPPHH 487
+PPHH
Sbjct: 413 YSPPHH 418
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,986,178
Number of Sequences: 28952
Number of extensions: 344570
Number of successful extensions: 1662
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 1236
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1605
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1447936096
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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