Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060753.seq
         (666 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic acetylch...    28   0.30 
U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         27   0.53 
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         27   0.53 
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    27   0.53 
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         25   2.1  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            24   5.0  
AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative transcrip...    23   8.7  

>AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 2 protein.
          Length = 569

 Score = 27.9 bits (59), Expect = 0.30
 Identities = 14/29 (48%), Positives = 18/29 (62%)
 Frame = -3

Query: 586 AEMTPNCPSSRTSPVSRVHRQTKPGGANG 500
           ++M PN  S  +SP S  H Q +PGG NG
Sbjct: 401 SQMQPN--SGGSSPDSIRHMQGRPGGCNG 427


>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 27.1 bits (57), Expect = 0.53
 Identities = 10/25 (40%), Positives = 19/25 (76%)
 Frame = -3

Query: 547 PVSRVHRQTKPGGANGCPIESEPPH 473
           P+S +H + +P G++G P+ ++PPH
Sbjct: 70  PISPLHIKQEPLGSDG-PMPAQPPH 93


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 27.1 bits (57), Expect = 0.53
 Identities = 10/25 (40%), Positives = 19/25 (76%)
 Frame = -3

Query: 547 PVSRVHRQTKPGGANGCPIESEPPH 473
           P+S +H + +P G++G P+ ++PPH
Sbjct: 70  PISPLHIKQEPLGSDG-PMPAQPPH 93


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 27.1 bits (57), Expect = 0.53
 Identities = 16/59 (27%), Positives = 28/59 (47%), Gaps = 5/59 (8%)
 Frame = -3

Query: 565 PSSRTSPVSR-VHRQTKPGGANGCPIESEPPHLFHFSSREPSSSP----GFVPQRPHGS 404
           P++R SP S  V   +  GG +  P  +  PH ++ ++   ++SP       P  PH +
Sbjct: 747 PATRASPSSPIVATSSSGGGGSNTPNSAAAPHPYYTAAAMAAASPLSLSSKAPPHPHSA 805


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 25.0 bits (52), Expect = 2.1
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = +1

Query: 202  LPDGRRLRLPXDVRGKGQELGL 267
            L DGRR+R+  +V GKG   G+
Sbjct: 2207 LTDGRRVRVTVEVFGKGTFRGI 2228


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 12/28 (42%), Positives = 14/28 (50%)
 Frame = +3

Query: 504  FAPPGFVWRCTRLTGLVREDGQFGVISA 587
            FAP G     T LTG +      GVI+A
Sbjct: 2736 FAPVGIAGSFTFLTGYIGATAAIGVITA 2763


>AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative
           transcription factor protein.
          Length = 593

 Score = 23.0 bits (47), Expect = 8.7
 Identities = 15/48 (31%), Positives = 20/48 (41%), Gaps = 5/48 (10%)
 Frame = -3

Query: 517 PGGANGCPIE--SEPPHLFHFSSRE---PSSSPGFVPQRPHGSPTCRY 389
           P   N CPI        +   ++RE   P+S  G  P  PH  P+  Y
Sbjct: 400 PQQQNQCPIHRIQHCTCMLQNNARESISPASGTGMSPSYPHSEPSPDY 447


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 671,782
Number of Sequences: 2352
Number of extensions: 15108
Number of successful extensions: 50
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 50
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66486645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)