Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060753.seq
(666 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 24 1.5
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 23 3.5
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 23 3.5
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 22 4.6
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 22 4.6
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 22 4.6
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 22 4.6
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 22 4.6
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 22 4.6
M29490-1|AAA27725.1| 109|Apis mellifera protein ( Bee homeobox-... 21 8.0
DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex det... 21 8.0
DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex det... 21 8.0
DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex det... 21 8.0
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 21 8.0
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 21 8.0
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 21 8.0
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 21 8.0
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 21 8.0
DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex det... 21 8.0
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 21 8.0
DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex det... 21 8.0
DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex det... 21 8.0
DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex det... 21 8.0
DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex det... 21 8.0
DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex det... 21 8.0
DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex det... 21 8.0
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 21 8.0
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 21 8.0
DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex det... 21 8.0
DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex det... 21 8.0
DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex det... 21 8.0
DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex det... 21 8.0
DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex det... 21 8.0
DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex det... 21 8.0
DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 21 8.0
AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex det... 21 8.0
AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex det... 21 8.0
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 21 8.0
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 21 8.0
AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex det... 21 8.0
AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex det... 21 8.0
AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex det... 21 8.0
AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex det... 21 8.0
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 21 8.0
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 21 8.0
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 21 8.0
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.8 bits (49), Expect = 1.5
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +2
Query: 329 CWGPPTAFPRSWTKSASR 382
C GPPT FPR +A R
Sbjct: 150 CIGPPTPFPRFIPPNAYR 167
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 22.6 bits (46), Expect = 3.5
Identities = 9/31 (29%), Positives = 16/31 (51%)
Frame = -2
Query: 470 VPLLESRAFKFARICPAKASWISHVSISLTL 378
+ L+S AFK + P + W S + L++
Sbjct: 2 IQCLQSSAFKEIKTLPDRGMWSSKIEFILSV 32
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 22.6 bits (46), Expect = 3.5
Identities = 9/31 (29%), Positives = 16/31 (51%)
Frame = -2
Query: 470 VPLLESRAFKFARICPAKASWISHVSISLTL 378
+ L+S AFK + P + W S + L++
Sbjct: 55 IQCLQSSAFKEIKTLPDRGMWSSKIEFILSV 85
Score = 22.2 bits (45), Expect = 4.6
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -3
Query: 565 PSSRTSPVSRVHRQTKP 515
PSS S +S+V R T P
Sbjct: 2 PSSEFSKISKVDRSTSP 18
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 22.2 bits (45), Expect = 4.6
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -1
Query: 432 DLSRKGLMDLPRVDIVDLEADFVQ 361
+LSR L DLP + I++L + VQ
Sbjct: 492 NLSRGMLWDLPNLQILNLARNKVQ 515
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.2 bits (45), Expect = 4.6
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +2
Query: 335 GPPTAFPRSWTKSASR 382
GPPT+FPR +A R
Sbjct: 379 GPPTSFPRFIPPNAYR 394
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.2 bits (45), Expect = 4.6
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +2
Query: 335 GPPTAFPRSWTKSASR 382
GPPT+FPR +A R
Sbjct: 379 GPPTSFPRFIPPNAYR 394
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.2 bits (45), Expect = 4.6
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +2
Query: 335 GPPTAFPRSWTKSASR 382
GPPT+FPR +A R
Sbjct: 379 GPPTSFPRFIPPNAYR 394
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.2 bits (45), Expect = 4.6
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +2
Query: 335 GPPTAFPRSWTKSASR 382
GPPT+FPR +A R
Sbjct: 379 GPPTSFPRFIPPNAYR 394
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 22.2 bits (45), Expect = 4.6
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +2
Query: 335 GPPTAFPRSWTKSASR 382
GPPT+FPR +A R
Sbjct: 368 GPPTSFPRFIPPNAYR 383
>M29490-1|AAA27725.1| 109|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone E30. ).
Length = 109
Score = 21.4 bits (43), Expect = 8.0
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = +2
Query: 44 TRKIVKRSTFLVDGKDGLVDKDNGIRVSAPEQLAKLKPAF 163
TR+ VKRS +GK+G ++ + EQLA+LK F
Sbjct: 4 TRR-VKRSH---NGKNGSPEEKRPRTAFSAEQLARLKREF 39
>DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.4 bits (43), Expect = 8.0
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +2
Query: 335 GPPTAFPRSWTKSASR 382
GPPT FPR +A R
Sbjct: 150 GPPTPFPRFIPPNAYR 165
>DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.4 bits (43), Expect = 8.0
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +2
Query: 335 GPPTAFPRSWTKSASR 382
GPPT FPR +A R
Sbjct: 150 GPPTPFPRFIPPNAYR 165
>DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.4 bits (43), Expect = 8.0
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +2
Query: 335 GPPTAFPRSWTKSASR 382
GPPT FPR +A R
Sbjct: 150 GPPTPFPRFIPPNAYR 165
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.0
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +2
Query: 335 GPPTAFPRSWTKSASR 382
GPPT FPR +A R
Sbjct: 152 GPPTPFPRFIPPNAYR 167
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.0
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +2
Query: 335 GPPTAFPRSWTKSASR 382
GPPT FPR +A R
Sbjct: 152 GPPTPFPRFIPPNAYR 167
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.0
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +2
Query: 335 GPPTAFPRSWTKSASR 382
GPPT FPR +A R
Sbjct: 152 GPPTPFPRFIPPNAYR 167
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.0
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +2
Query: 335 GPPTAFPRSWTKSASR 382
GPPT FPR +A R
Sbjct: 152 GPPTPFPRFIPPNAYR 167
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.0
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +2
Query: 335 GPPTAFPRSWTKSASR 382
GPPT FPR +A R
Sbjct: 152 GPPTPFPRFIPPNAYR 167
>DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.4 bits (43), Expect = 8.0
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +2
Query: 335 GPPTAFPRSWTKSASR 382
GPPT FPR +A R
Sbjct: 156 GPPTPFPRFIPPNAYR 171
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.0
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +2
Query: 335 GPPTAFPRSWTKSASR 382
GPPT FPR +A R
Sbjct: 152 GPPTPFPRFIPPNAYR 167
>DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 21.4 bits (43), Expect = 8.0
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +2
Query: 335 GPPTAFPRSWTKSASR 382
GPPT FPR +A R
Sbjct: 151 GPPTPFPRFIPPNAYR 166
>DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 21.4 bits (43), Expect = 8.0
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +2
Query: 335 GPPTAFPRSWTKSASR 382
GPPT FPR +A R
Sbjct: 151 GPPTPFPRFIPPNAYR 166
>DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.4 bits (43), Expect = 8.0
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +2
Query: 335 GPPTAFPRSWTKSASR 382
GPPT FPR +A R
Sbjct: 146 GPPTPFPRFIPPNAYR 161
>DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.4 bits (43), Expect = 8.0
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +2
Query: 335 GPPTAFPRSWTKSASR 382
GPPT FPR +A R
Sbjct: 146 GPPTPFPRFIPPNAYR 161
>DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.4 bits (43), Expect = 8.0
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +2
Query: 335 GPPTAFPRSWTKSASR 382
GPPT FPR +A R
Sbjct: 146 GPPTPFPRFIPPNAYR 161
>DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.4 bits (43), Expect = 8.0
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +2
Query: 335 GPPTAFPRSWTKSASR 382
GPPT FPR +A R
Sbjct: 146 GPPTPFPRFIPPNAYR 161
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.4 bits (43), Expect = 8.0
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +2
Query: 335 GPPTAFPRSWTKSASR 382
GPPT FPR +A R
Sbjct: 157 GPPTPFPRFIPPNAYR 172
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.4 bits (43), Expect = 8.0
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +2
Query: 335 GPPTAFPRSWTKSASR 382
GPPT FPR +A R
Sbjct: 157 GPPTPFPRFIPPNAYR 172
>DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 21.4 bits (43), Expect = 8.0
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +2
Query: 335 GPPTAFPRSWTKSASR 382
GPPT FPR +A R
Sbjct: 160 GPPTPFPRFIPPNAYR 175
>DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.4 bits (43), Expect = 8.0
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +2
Query: 335 GPPTAFPRSWTKSASR 382
GPPT FPR +A R
Sbjct: 150 GPPTPFPRFIPPNAYR 165
>DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 21.4 bits (43), Expect = 8.0
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +2
Query: 335 GPPTAFPRSWTKSASR 382
GPPT FPR +A R
Sbjct: 155 GPPTPFPRFIPPNAYR 170
>DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 21.4 bits (43), Expect = 8.0
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +2
Query: 335 GPPTAFPRSWTKSASR 382
GPPT FPR +A R
Sbjct: 155 GPPTPFPRFIPPNAYR 170
>DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 21.4 bits (43), Expect = 8.0
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +2
Query: 335 GPPTAFPRSWTKSASR 382
GPPT FPR +A R
Sbjct: 155 GPPTPFPRFIPPNAYR 170
>DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.0
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +2
Query: 335 GPPTAFPRSWTKSASR 382
GPPT FPR +A R
Sbjct: 152 GPPTPFPRFIPPNAYR 167
>DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex
determiner protein.
Length = 191
Score = 21.4 bits (43), Expect = 8.0
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +2
Query: 335 GPPTAFPRSWTKSASR 382
GPPT FPR +A R
Sbjct: 162 GPPTPFPRFIPPNAYR 177
>AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 21.4 bits (43), Expect = 8.0
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +2
Query: 335 GPPTAFPRSWTKSASR 382
GPPT FPR +A R
Sbjct: 371 GPPTPFPRFIPPNAYR 386
>AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 21.4 bits (43), Expect = 8.0
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +2
Query: 335 GPPTAFPRSWTKSASR 382
GPPT FPR +A R
Sbjct: 377 GPPTPFPRFIPPNAYR 392
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 21.4 bits (43), Expect = 8.0
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +2
Query: 335 GPPTAFPRSWTKSASR 382
GPPT FPR +A R
Sbjct: 377 GPPTPFPRFIPPNAYR 392
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 21.4 bits (43), Expect = 8.0
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +2
Query: 335 GPPTAFPRSWTKSASR 382
GPPT FPR +A R
Sbjct: 397 GPPTPFPRFIPPNAYR 412
>AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 21.4 bits (43), Expect = 8.0
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +2
Query: 335 GPPTAFPRSWTKSASR 382
GPPT FPR +A R
Sbjct: 367 GPPTPFPRFIPPNAYR 382
>AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.4 bits (43), Expect = 8.0
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +2
Query: 335 GPPTAFPRSWTKSASR 382
GPPT FPR +A R
Sbjct: 378 GPPTPFPRFIPPNAYR 393
>AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.4 bits (43), Expect = 8.0
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +2
Query: 335 GPPTAFPRSWTKSASR 382
GPPT FPR +A R
Sbjct: 378 GPPTPFPRFIPPNAYR 393
>AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 21.4 bits (43), Expect = 8.0
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +2
Query: 335 GPPTAFPRSWTKSASR 382
GPPT FPR +A R
Sbjct: 367 GPPTPFPRFIPPNAYR 382
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 21.4 bits (43), Expect = 8.0
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +2
Query: 335 GPPTAFPRSWTKSASR 382
GPPT FPR +A R
Sbjct: 385 GPPTPFPRFIPPNAYR 400
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 21.4 bits (43), Expect = 8.0
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +2
Query: 335 GPPTAFPRSWTKSASR 382
GPPT FPR +A R
Sbjct: 389 GPPTPFPRFIPPNAYR 404
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 21.4 bits (43), Expect = 8.0
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +2
Query: 335 GPPTAFPRSWTKSASR 382
GPPT FPR +A R
Sbjct: 399 GPPTPFPRFIPPNAYR 414
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,896
Number of Sequences: 438
Number of extensions: 3794
Number of successful extensions: 57
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 56
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 57
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20099475
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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