BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= NV060753.seq (666 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At5g48230.2 68418.m05959 acetyl-CoA C-acyltransferase, putative ... 50 1e-06 At5g48230.1 68418.m05958 acetyl-CoA C-acyltransferase, putative ... 50 1e-06 At5g47720.4 68418.m05895 acetyl-CoA C-acyltransferase, putative ... 49 3e-06 At5g47720.3 68418.m05894 acetyl-CoA C-acyltransferase, putative ... 49 3e-06 At5g47720.2 68418.m05896 acetyl-CoA C-acyltransferase, putative ... 49 3e-06 At5g47720.1 68418.m05893 acetyl-CoA C-acyltransferase, putative ... 49 3e-06 At1g04710.1 68414.m00468 acetyl-CoA C-acyltransferase, putative ... 47 1e-05 At2g33150.1 68415.m04062 acetyl-CoA C-acyltransferase, putative ... 46 2e-05 At5g48880.2 68418.m06047 acetyl-CoA C-acyltransferase 1 / 3-keto... 46 3e-05 At5g48880.1 68418.m06046 acetyl-CoA C-acyltransferase 1 / 3-keto... 46 3e-05 At4g00450.1 68417.m00062 expressed protein 32 0.39 At4g23050.2 68417.m03324 protein kinase, putative similar to MAP... 28 4.9 At4g23050.1 68417.m03323 protein kinase, putative similar to MAP... 28 4.9 At1g11290.1 68414.m01297 pentatricopeptide (PPR) repeat-containi... 28 4.9 At5g25350.1 68418.m03007 F-box family protein contains Pfam PF00... 27 8.5 At1g70560.1 68414.m08123 alliinase C-terminal domain-containing ... 27 8.5 At1g10170.1 68414.m01147 NF-X1 type zinc finger family protein c... 27 8.5 At1g04470.1 68414.m00438 expressed protein EST gb|ATTS5672 comes... 27 8.5 >At5g48230.2 68418.m05959 acetyl-CoA C-acyltransferase, putative / 3-ketoacyl-CoA thiolase, putative strong similarity to Acetoacetyl-coenzyme A thiolase (E.C. 2.3.1.9) [Raphanus sativus] GI:1542941; contains InterPro accession IPR002155: Thiolase Length = 403 Score = 50.0 bits (114), Expect = 1e-06 Identities = 25/53 (47%), Positives = 36/53 (67%) Frame = +2 Query: 95 LVDKDNGIRVSAPEQLAKLKPAFIKPHGTVTAANASFLTDGASACLXMSEAKA 253 +VDKD G+ +L KL+P+F + GTVTA NAS ++DGA+A + +S KA Sbjct: 223 IVDKDEGLGKFDAAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKA 275 Score = 46.8 bits (106), Expect = 1e-05 Identities = 27/69 (39%), Positives = 39/69 (56%) Frame = +1 Query: 247 KGQELGLKPKAYLRDFTYVAQDPVDQLLLGPAYGIPKILDKVGLKVNDIDTWEIHEAFAG 426 K +LGL A ++ + AQ+P + PA IPK + GL+ + +D +EI+EAFA Sbjct: 274 KALQLGLLVLAKIKGYGDAAQEP-EFFTTAPALAIPKAIAHAGLESSQVDYYEINEAFAV 332 Query: 427 QILANLKAL 453 LAN K L Sbjct: 333 VALANQKLL 341 Score = 33.1 bits (72), Expect = 0.17 Identities = 19/51 (37%), Positives = 27/51 (52%) Frame = +3 Query: 438 ELEGSRLEKWNKWGGSLSIGHPFAPPGFVWRCTRLTGLVREDGQFGVISAC 590 +L G EK N GG++S+GHP G T L L + +G++GV C Sbjct: 339 KLLGIAPEKVNVNGGAVSLGHPLGCSGARILITLLGILKKRNGKYGVGGVC 389 >At5g48230.1 68418.m05958 acetyl-CoA C-acyltransferase, putative / 3-ketoacyl-CoA thiolase, putative strong similarity to Acetoacetyl-coenzyme A thiolase (E.C. 2.3.1.9) [Raphanus sativus] GI:1542941; contains InterPro accession IPR002155: Thiolase Length = 398 Score = 50.0 bits (114), Expect = 1e-06 Identities = 25/53 (47%), Positives = 36/53 (67%) Frame = +2 Query: 95 LVDKDNGIRVSAPEQLAKLKPAFIKPHGTVTAANASFLTDGASACLXMSEAKA 253 +VDKD G+ +L KL+P+F + GTVTA NAS ++DGA+A + +S KA Sbjct: 218 IVDKDEGLGKFDAAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKA 270 Score = 46.8 bits (106), Expect = 1e-05 Identities = 27/69 (39%), Positives = 39/69 (56%) Frame = +1 Query: 247 KGQELGLKPKAYLRDFTYVAQDPVDQLLLGPAYGIPKILDKVGLKVNDIDTWEIHEAFAG 426 K +LGL A ++ + AQ+P + PA IPK + GL+ + +D +EI+EAFA Sbjct: 269 KALQLGLLVLAKIKGYGDAAQEP-EFFTTAPALAIPKAIAHAGLESSQVDYYEINEAFAV 327 Query: 427 QILANLKAL 453 LAN K L Sbjct: 328 VALANQKLL 336 Score = 33.1 bits (72), Expect = 0.17 Identities = 19/51 (37%), Positives = 27/51 (52%) Frame = +3 Query: 438 ELEGSRLEKWNKWGGSLSIGHPFAPPGFVWRCTRLTGLVREDGQFGVISAC 590 +L G EK N GG++S+GHP G T L L + +G++GV C Sbjct: 334 KLLGIAPEKVNVNGGAVSLGHPLGCSGARILITLLGILKKRNGKYGVGGVC 384 >At5g47720.4 68418.m05895 acetyl-CoA C-acyltransferase, putative / 3-ketoacyl-CoA thiolase, putative strong similarity to Acetoacetyl-coenzyme A thiolase (E.C. 2.3.1.9) [Raphanus sativus] GI:1542941; contains InterPro accession IPR002155: Thiolase Length = 406 Score = 48.8 bits (111), Expect = 3e-06 Identities = 33/85 (38%), Positives = 43/85 (50%), Gaps = 3/85 (3%) Frame = +1 Query: 247 KGQELGLKPKAYLRDFTYVAQDPVDQLLLGPAYGIPKILDKVGLKVNDIDTWEIHEAFAG 426 K ELGL A +R + AQ P + PA IPK + + GL + +D +EI+EAF+ Sbjct: 277 KALELGLHVIAKIRGYADAAQAP-ELFTTTPALAIPKAIKRAGLDASQVDYYEINEAFSV 335 Query: 427 QILANLKAL---DSRSGTSGAARSL 492 LAN K L R G A SL Sbjct: 336 VALANQKLLGLDPERLNAHGGAVSL 360 Score = 48.0 bits (109), Expect = 6e-06 Identities = 23/53 (43%), Positives = 36/53 (67%) Frame = +2 Query: 95 LVDKDNGIRVSAPEQLAKLKPAFIKPHGTVTAANASFLTDGASACLXMSEAKA 253 ++DKD G+ +L KL+P+F + G+VTA NAS ++DGA+A + +S KA Sbjct: 226 VIDKDEGLGKFDAAKLKKLRPSFKEDGGSVTAGNASSISDGAAALVLVSGEKA 278 Score = 33.9 bits (74), Expect = 0.098 Identities = 19/51 (37%), Positives = 27/51 (52%) Frame = +3 Query: 438 ELEGSRLEKWNKWGGSLSIGHPFAPPGFVWRCTRLTGLVREDGQFGVISAC 590 +L G E+ N GG++S+GHP G T L L + G++GV S C Sbjct: 342 KLLGLDPERLNAHGGAVSLGHPLGCSGARILVTLLGVLRAKKGKYGVASIC 392 >At5g47720.3 68418.m05894 acetyl-CoA C-acyltransferase, putative / 3-ketoacyl-CoA thiolase, putative strong similarity to Acetoacetyl-coenzyme A thiolase (E.C. 2.3.1.9) [Raphanus sativus] GI:1542941; contains InterPro accession IPR002155: Thiolase Length = 405 Score = 48.8 bits (111), Expect = 3e-06 Identities = 33/85 (38%), Positives = 43/85 (50%), Gaps = 3/85 (3%) Frame = +1 Query: 247 KGQELGLKPKAYLRDFTYVAQDPVDQLLLGPAYGIPKILDKVGLKVNDIDTWEIHEAFAG 426 K ELGL A +R + AQ P + PA IPK + + GL + +D +EI+EAF+ Sbjct: 276 KALELGLHVIAKIRGYADAAQAP-ELFTTTPALAIPKAIKRAGLDASQVDYYEINEAFSV 334 Query: 427 QILANLKAL---DSRSGTSGAARSL 492 LAN K L R G A SL Sbjct: 335 VALANQKLLGLDPERLNAHGGAVSL 359 Score = 48.0 bits (109), Expect = 6e-06 Identities = 23/53 (43%), Positives = 36/53 (67%) Frame = +2 Query: 95 LVDKDNGIRVSAPEQLAKLKPAFIKPHGTVTAANASFLTDGASACLXMSEAKA 253 ++DKD G+ +L KL+P+F + G+VTA NAS ++DGA+A + +S KA Sbjct: 225 VIDKDEGLGKFDAAKLKKLRPSFKEDGGSVTAGNASSISDGAAALVLVSGEKA 277 Score = 33.9 bits (74), Expect = 0.098 Identities = 19/51 (37%), Positives = 27/51 (52%) Frame = +3 Query: 438 ELEGSRLEKWNKWGGSLSIGHPFAPPGFVWRCTRLTGLVREDGQFGVISAC 590 +L G E+ N GG++S+GHP G T L L + G++GV S C Sbjct: 341 KLLGLDPERLNAHGGAVSLGHPLGCSGARILVTLLGVLRAKKGKYGVASIC 391 >At5g47720.2 68418.m05896 acetyl-CoA C-acyltransferase, putative / 3-ketoacyl-CoA thiolase, putative strong similarity to Acetoacetyl-coenzyme A thiolase (E.C. 2.3.1.9) [Raphanus sativus] GI:1542941; contains InterPro accession IPR002155: Thiolase Length = 415 Score = 48.8 bits (111), Expect = 3e-06 Identities = 33/85 (38%), Positives = 43/85 (50%), Gaps = 3/85 (3%) Frame = +1 Query: 247 KGQELGLKPKAYLRDFTYVAQDPVDQLLLGPAYGIPKILDKVGLKVNDIDTWEIHEAFAG 426 K ELGL A +R + AQ P + PA IPK + + GL + +D +EI+EAF+ Sbjct: 276 KALELGLHVIAKIRGYADAAQAP-ELFTTTPALAIPKAIKRAGLDASQVDYYEINEAFSV 334 Query: 427 QILANLKAL---DSRSGTSGAARSL 492 LAN K L R G A SL Sbjct: 335 VALANQKLLGLDPERLNAHGGAVSL 359 Score = 48.0 bits (109), Expect = 6e-06 Identities = 23/53 (43%), Positives = 36/53 (67%) Frame = +2 Query: 95 LVDKDNGIRVSAPEQLAKLKPAFIKPHGTVTAANASFLTDGASACLXMSEAKA 253 ++DKD G+ +L KL+P+F + G+VTA NAS ++DGA+A + +S KA Sbjct: 225 VIDKDEGLGKFDAAKLKKLRPSFKEDGGSVTAGNASSISDGAAALVLVSGEKA 277 Score = 33.9 bits (74), Expect = 0.098 Identities = 19/51 (37%), Positives = 27/51 (52%) Frame = +3 Query: 438 ELEGSRLEKWNKWGGSLSIGHPFAPPGFVWRCTRLTGLVREDGQFGVISAC 590 +L G E+ N GG++S+GHP G T L L + G++GV S C Sbjct: 341 KLLGLDPERLNAHGGAVSLGHPLGCSGARILVTLLGVLRAKKGKYGVASIC 391 >At5g47720.1 68418.m05893 acetyl-CoA C-acyltransferase, putative / 3-ketoacyl-CoA thiolase, putative strong similarity to Acetoacetyl-coenzyme A thiolase (E.C. 2.3.1.9) [Raphanus sativus] GI:1542941; contains InterPro accession IPR002155: Thiolase Length = 405 Score = 48.8 bits (111), Expect = 3e-06 Identities = 33/85 (38%), Positives = 43/85 (50%), Gaps = 3/85 (3%) Frame = +1 Query: 247 KGQELGLKPKAYLRDFTYVAQDPVDQLLLGPAYGIPKILDKVGLKVNDIDTWEIHEAFAG 426 K ELGL A +R + AQ P + PA IPK + + GL + +D +EI+EAF+ Sbjct: 276 KALELGLHVIAKIRGYADAAQAP-ELFTTTPALAIPKAIKRAGLDASQVDYYEINEAFSV 334 Query: 427 QILANLKAL---DSRSGTSGAARSL 492 LAN K L R G A SL Sbjct: 335 VALANQKLLGLDPERLNAHGGAVSL 359 Score = 48.0 bits (109), Expect = 6e-06 Identities = 23/53 (43%), Positives = 36/53 (67%) Frame = +2 Query: 95 LVDKDNGIRVSAPEQLAKLKPAFIKPHGTVTAANASFLTDGASACLXMSEAKA 253 ++DKD G+ +L KL+P+F + G+VTA NAS ++DGA+A + +S KA Sbjct: 225 VIDKDEGLGKFDAAKLKKLRPSFKEDGGSVTAGNASSISDGAAALVLVSGEKA 277 Score = 33.9 bits (74), Expect = 0.098 Identities = 19/51 (37%), Positives = 27/51 (52%) Frame = +3 Query: 438 ELEGSRLEKWNKWGGSLSIGHPFAPPGFVWRCTRLTGLVREDGQFGVISAC 590 +L G E+ N GG++S+GHP G T L L + G++GV S C Sbjct: 341 KLLGLDPERLNAHGGAVSLGHPLGCSGARILVTLLGVLRAKKGKYGVASIC 391 >At1g04710.1 68414.m00468 acetyl-CoA C-acyltransferase, putative / 3-ketoacyl-CoA thiolase, putative similar to 3-ketoacyl-CoA thiolase (E.C. 2.3.1.16) from [Arabidopsis thaliana] GI:2981616, [Cucumis sativus] GI:393707, [Cucurbita cv. Kurokawa Amakuri] GI:1694621; contains InterPro accession IPR002155: Thiolase Length = 443 Score = 47.2 bits (107), Expect = 1e-05 Identities = 25/65 (38%), Positives = 36/65 (55%) Frame = +1 Query: 241 RGKGQELGLKPKAYLRDFTYVAQDPVDQLLLGPAYGIPKILDKVGLKVNDIDTWEIHEAF 420 R + GL R F+ V DP + +GPA IP + GL++ND+D +EI+EAF Sbjct: 298 RNVAMQKGLPILGVFRTFSAVGVDPAI-MGVGPAVAIPAAVKAAGLELNDVDLFEINEAF 356 Query: 421 AGQIL 435 A Q + Sbjct: 357 ASQFV 361 Score = 44.0 bits (99), Expect = 9e-05 Identities = 28/54 (51%), Positives = 32/54 (59%), Gaps = 1/54 (1%) Frame = +2 Query: 80 DGKDGLVDKDNGIRVSAP-EQLAKLKPAFIKPHGTVTAANASFLTDGASACLXM 238 D K V D+GIR + LAKLKP F K GT TA N+S L+DGA A L M Sbjct: 244 DEKPITVSVDDGIRPNTTLSGLAKLKPVF-KEDGTTTAGNSSQLSDGAGAVLLM 296 Score = 33.9 bits (74), Expect = 0.098 Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 2/50 (4%) Frame = +3 Query: 447 GSRLEKWNKWGGSLSIGHPFAPPGFVWRCTRLTGLVR--EDGQFGVISAC 590 G EK N GG+++IGHP G T L + R +D +FGV+S C Sbjct: 368 GLDAEKINVNGGAIAIGHPLGATGARCVATLLHEMKRRGKDCRFGVVSMC 417 >At2g33150.1 68415.m04062 acetyl-CoA C-acyltransferase, putative / 3-ketoacyl-CoA thiolase, putative similar to 3-ketoacyl-CoA thiolase (E.C. 2.3.1.16) from [Arabidopsis thaliana] GI:2981616, [Cucumis sativus] GI:393707, [Cucurbita cv. Kurokawa Amakuri] GI:1694621; contains InterPro accession IPR002155: Thiolase Length = 462 Score = 46.0 bits (104), Expect = 2e-05 Identities = 25/65 (38%), Positives = 35/65 (53%) Frame = +1 Query: 241 RGKGQELGLKPKAYLRDFTYVAQDPVDQLLLGPAYGIPKILDKVGLKVNDIDTWEIHEAF 420 R + GL R F V DP + +GPA IP + GL+++DID +EI+EAF Sbjct: 306 RSVAMQKGLPVLGVFRTFAAVGVDPAI-MGIGPAVAIPAAVKAAGLELDDIDLFEINEAF 364 Query: 421 AGQIL 435 A Q + Sbjct: 365 ASQFV 369 Score = 44.8 bits (101), Expect = 5e-05 Identities = 32/74 (43%), Positives = 40/74 (54%), Gaps = 6/74 (8%) Frame = +2 Query: 50 KIVKRSTFLVDGKDG-----LVDKDNGIRVSAP-EQLAKLKPAFIKPHGTVTAANASFLT 211 +I+ T LVD K G V D+GIR + L KLKP F K GT TA N+S ++ Sbjct: 237 EIIPVKTKLVDPKTGDEKPITVSVDDGIRPTTTLASLGKLKPVF-KKDGTTTAGNSSQVS 295 Query: 212 DGASACLXMSEAKA 253 DGA A L M + A Sbjct: 296 DGAGAVLLMKRSVA 309 Score = 33.5 bits (73), Expect = 0.13 Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 2/46 (4%) Frame = +3 Query: 459 EKWNKWGGSLSIGHPFAPPGFVWRCTRLTGLVR--EDGQFGVISAC 590 EK N GG+++IGHP G T L + R +D +FGV+S C Sbjct: 380 EKINVNGGAMAIGHPLGATGARCVATLLHEMKRRGKDCRFGVVSMC 425 >At5g48880.2 68418.m06047 acetyl-CoA C-acyltransferase 1 / 3-ketoacyl-CoA thiolase 1 (PKT1) identical to 3-keto-acyl-CoA-thiolase 1 [Arabidopsis thaliana] GI:3169568 Length = 457 Score = 45.6 bits (103), Expect = 3e-05 Identities = 26/72 (36%), Positives = 36/72 (50%) Frame = +1 Query: 241 RGKGQELGLKPKAYLRDFTYVAQDPVDQLLLGPAYGIPKILDKVGLKVNDIDTWEIHEAF 420 R + GL R F +P + +GPA IP GL V+DID +EI+EAF Sbjct: 307 RSLAMKKGLPILGVFRSFAVTGVEP-SVMGIGPAVAIPAATKLAGLNVSDIDLFEINEAF 365 Query: 421 AGQILANLKALD 456 A Q + + K L+ Sbjct: 366 ASQYVYSCKKLE 377 Score = 40.7 bits (91), Expect = 9e-04 Identities = 24/54 (44%), Positives = 34/54 (62%), Gaps = 1/54 (1%) Frame = +2 Query: 95 LVDKDNGIRVSAP-EQLAKLKPAFIKPHGTVTAANASFLTDGASACLXMSEAKA 253 +V D+G+R ++ LAKLK F K +G+ TA NAS ++DGA A L M + A Sbjct: 258 VVSVDDGVRPNSNMADLAKLKTVF-KQNGSTTAGNASQISDGAGAVLLMKRSLA 310 Score = 34.7 bits (76), Expect = 0.056 Identities = 20/47 (42%), Positives = 27/47 (57%), Gaps = 2/47 (4%) Frame = +3 Query: 456 LEKWNKWGGSLSIGHPFAPPGFVWRCTRLTGLVR--EDGQFGVISAC 590 +EK N GG+++IGHP G T L + R +D +FGVIS C Sbjct: 380 MEKVNVNGGAIAIGHPLGATGARCVATLLHEMKRRGKDCRFGVISMC 426 >At5g48880.1 68418.m06046 acetyl-CoA C-acyltransferase 1 / 3-ketoacyl-CoA thiolase 1 (PKT1) identical to 3-keto-acyl-CoA-thiolase 1 [Arabidopsis thaliana] GI:3169568 Length = 414 Score = 45.6 bits (103), Expect = 3e-05 Identities = 26/72 (36%), Positives = 36/72 (50%) Frame = +1 Query: 241 RGKGQELGLKPKAYLRDFTYVAQDPVDQLLLGPAYGIPKILDKVGLKVNDIDTWEIHEAF 420 R + GL R F +P + +GPA IP GL V+DID +EI+EAF Sbjct: 264 RSLAMKKGLPILGVFRSFAVTGVEP-SVMGIGPAVAIPAATKLAGLNVSDIDLFEINEAF 322 Query: 421 AGQILANLKALD 456 A Q + + K L+ Sbjct: 323 ASQYVYSCKKLE 334 Score = 40.7 bits (91), Expect = 9e-04 Identities = 24/54 (44%), Positives = 34/54 (62%), Gaps = 1/54 (1%) Frame = +2 Query: 95 LVDKDNGIRVSAP-EQLAKLKPAFIKPHGTVTAANASFLTDGASACLXMSEAKA 253 +V D+G+R ++ LAKLK F K +G+ TA NAS ++DGA A L M + A Sbjct: 215 VVSVDDGVRPNSNMADLAKLKTVF-KQNGSTTAGNASQISDGAGAVLLMKRSLA 267 Score = 34.7 bits (76), Expect = 0.056 Identities = 20/47 (42%), Positives = 27/47 (57%), Gaps = 2/47 (4%) Frame = +3 Query: 456 LEKWNKWGGSLSIGHPFAPPGFVWRCTRLTGLVR--EDGQFGVISAC 590 +EK N GG+++IGHP G T L + R +D +FGVIS C Sbjct: 337 MEKVNVNGGAIAIGHPLGATGARCVATLLHEMKRRGKDCRFGVISMC 383 >At4g00450.1 68417.m00062 expressed protein Length = 2124 Score = 31.9 bits (69), Expect = 0.39 Identities = 20/53 (37%), Positives = 24/53 (45%), Gaps = 6/53 (11%) Frame = +2 Query: 146 KLKPAFIKPHGTVTAANA------SFLTDGASACLXMSEAKARSSASNRRPTC 286 KLKP + PH A N + L DG S+ L S A S +N R TC Sbjct: 2049 KLKPTMLAPHQQQEADNTDVVDPWTLLEDGTSSGLSSSNASNSSDMANLRATC 2101 >At4g23050.2 68417.m03324 protein kinase, putative similar to MAP3K delta-1 protein kinase [Arabidopsis thaliana] gi|2253010|emb|CAA74591; contains Pfam PF00069 Protein kinase domain and PF00989 PAS domain Length = 736 Score = 28.3 bits (60), Expect = 4.9 Identities = 18/55 (32%), Positives = 27/55 (49%) Frame = +3 Query: 306 SGSRGPAAVGARLRHSQDLGQSRPQGQRYRHVGDP*GLCGTNPGELEGSRLEKWN 470 +G+ G G R ++ +LGQS+P R G G+ GT +L G + WN Sbjct: 374 NGAEGLIHNGDRFQYIGNLGQSKP--PRGLESGLVSGMRGTKMSDLNGEIEDAWN 426 >At4g23050.1 68417.m03323 protein kinase, putative similar to MAP3K delta-1 protein kinase [Arabidopsis thaliana] gi|2253010|emb|CAA74591; contains Pfam PF00069 Protein kinase domain and PF00989 PAS domain Length = 735 Score = 28.3 bits (60), Expect = 4.9 Identities = 18/55 (32%), Positives = 27/55 (49%) Frame = +3 Query: 306 SGSRGPAAVGARLRHSQDLGQSRPQGQRYRHVGDP*GLCGTNPGELEGSRLEKWN 470 +G+ G G R ++ +LGQS+P R G G+ GT +L G + WN Sbjct: 373 NGAEGLIHNGDRFQYIGNLGQSKP--PRGLESGLVSGMRGTKMSDLNGEIEDAWN 425 >At1g11290.1 68414.m01297 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat Length = 809 Score = 28.3 bits (60), Expect = 4.9 Identities = 18/87 (20%), Positives = 38/87 (43%), Gaps = 2/87 (2%) Frame = -1 Query: 444 QVRQDLSRKGLMDLPRVDIVDLEADFVQDLGNAVGGPQQQLVHGILSD-VCEVPQVGLRF 268 QVR + R+GL P +V+++ + + P + ++ L +C + + G Sbjct: 662 QVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEAGYVP 721 Query: 267 EAEL-LAFASDIXRQAEAPSVRKDALA 190 + L L +D+ Q + K A++ Sbjct: 722 DTNLVLGVENDVKEQLLSTHSEKLAIS 748 >At5g25350.1 68418.m03007 F-box family protein contains Pfam PF00646: F-box domain and Pfam PF00560: Leucine Rich Repeat (6 copies); similar to F-box protein FBL6 (GI:4432860) [Homo sapiens] Length = 623 Score = 27.5 bits (58), Expect = 8.5 Identities = 27/98 (27%), Positives = 41/98 (41%), Gaps = 1/98 (1%) Frame = -1 Query: 420 KGLMDLPRVDIVDLEADFVQDLG-NAVGGPQQQLVHGILSDVCEVPQVGLRFEAELLAFA 244 KGL L + ++ + D+G AVG L H L+ V GL A+ A + Sbjct: 322 KGLKKLKSLSVMSCRG--MTDVGLEAVGNGCPDLKHVSLNKCLLVSGKGLVALAKS-ALS 378 Query: 243 SDIXRQAEAPSVRKDALAAVTVPCGLMKAGFSLASCSG 130 + + E + + L + CG FSLA+C G Sbjct: 379 LESLKLEECHRINQFGLMGFLMNCGSKLKAFSLANCLG 416 >At1g70560.1 68414.m08123 alliinase C-terminal domain-containing protein contains Pfam profiles: PF04864 allinase C-terminal domain, PF04863 alliinase EGF-like domain Length = 391 Score = 27.5 bits (58), Expect = 8.5 Identities = 10/23 (43%), Positives = 13/23 (56%) Frame = +2 Query: 335 GPPTAFPRSWTKSASRSTISTRG 403 G PTA+ W K R T++ RG Sbjct: 30 GDPTAYEEYWRKMGDRCTVTIRG 52 >At1g10170.1 68414.m01147 NF-X1 type zinc finger family protein contains Pfam PF01422: NF-X1 type zinc finger; similar to transcriptional repressor NF-X1 (SP:Q12986) [Homo sapiens]; similar to EST gb|T21002 Length = 1188 Score = 27.5 bits (58), Expect = 8.5 Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 1/44 (2%) Frame = -2 Query: 584 RDDSKLPVL-PHQPGEPCASPDETRWREWMSDRERAAPLVPLLE 456 RD P L PH GEPC P E + + E P V +L+ Sbjct: 299 RDPPSDPYLTPHSCGEPCGKPLEKEFAPAETTEEDLCPHVCVLQ 342 >At1g04470.1 68414.m00438 expressed protein EST gb|ATTS5672 comes from this gene Length = 1035 Score = 27.5 bits (58), Expect = 8.5 Identities = 13/40 (32%), Positives = 22/40 (55%) Frame = -1 Query: 393 DIVDLEADFVQDLGNAVGGPQQQLVHGILSDVCEVPQVGL 274 ++VD EA+ V+ + +G P +QL+ CE +GL Sbjct: 946 EVVDREAETVEGVIQLMGQPTEQLMEDFSIVTCESSGMGL 985 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 14,293,278 Number of Sequences: 28952 Number of extensions: 305690 Number of successful extensions: 1058 Number of sequences better than 10.0: 18 Number of HSP's better than 10.0 without gapping: 988 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1051 length of database: 12,070,560 effective HSP length: 78 effective length of database: 9,812,304 effective search space used: 1403159472 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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