Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060751.seq
         (473 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory pro...    23   1.9  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    22   3.3  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    21   5.8  
L01616-1|AAA30096.1|   74|Tribolium castaneum zinc finger protei...    21   7.7  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    21   7.7  

>DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory
           protein 15 protein.
          Length = 146

 Score = 22.6 bits (46), Expect = 1.9
 Identities = 11/33 (33%), Positives = 14/33 (42%)
 Frame = -3

Query: 342 HRDIHLXHLYTHXRVQTPSLGLQHLASLPQASF 244
           H +I L HL+         + LQHL   P   F
Sbjct: 106 HHEIKLQHLHQSKFNPHEEVKLQHLHQFPHHDF 138


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 21.8 bits (44), Expect = 3.3
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = -3

Query: 156 RP*IIFAVSVLFLF*FKPVSLAICIHSS 73
           +P + FAV+ LF    K  S  +C + S
Sbjct: 5   KPLLFFAVATLFAAYCKAESKVVCYYDS 32


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 21.0 bits (42), Expect = 5.8
 Identities = 7/30 (23%), Positives = 16/30 (53%)
 Frame = +1

Query: 328 MNIAMITLGSVFGCWMVIQVTLIYSSLRSV 417
           + I + TLG +  C    Q+T+ +  ++ +
Sbjct: 77  LGITIQTLGIISNCINAKQITIFFDKIQRI 106


>L01616-1|AAA30096.1|   74|Tribolium castaneum zinc finger protein
           protein.
          Length = 74

 Score = 20.6 bits (41), Expect = 7.7
 Identities = 9/20 (45%), Positives = 10/20 (50%)
 Frame = -3

Query: 351 ECDHRDIHLXHLYTHXRVQT 292
           EC  R     HL TH R+ T
Sbjct: 14  ECHKRFTRDHHLKTHMRLHT 33


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 20.6 bits (41), Expect = 7.7
 Identities = 9/20 (45%), Positives = 10/20 (50%)
 Frame = -3

Query: 351 ECDHRDIHLXHLYTHXRVQT 292
           EC  R     HL TH R+ T
Sbjct: 167 ECHKRFTRDHHLKTHMRLHT 186


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,206
Number of Sequences: 336
Number of extensions: 1734
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 11036865
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)