Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060751.seq
(473 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY058302-1|AAL13531.1| 493|Drosophila melanogaster GH06357p pro... 109 2e-24
AE014298-1573|AAN09289.1| 493|Drosophila melanogaster CG1938-PD... 109 2e-24
AE014298-1572|AAN09288.1| 493|Drosophila melanogaster CG1938-PC... 109 2e-24
AE014298-1571|AAF48011.2| 493|Drosophila melanogaster CG1938-PA... 109 2e-24
AE014298-1575|AAN09291.1| 398|Drosophila melanogaster CG1938-PB... 58 5e-09
X54251-1|CAA38152.1| 1596|Drosophila melanogaster nuclear protei... 28 7.4
AE014297-4119|ABI31211.1| 4685|Drosophila melanogaster CG3339-PB... 27 9.8
AE014297-4118|AAF56699.2| 4543|Drosophila melanogaster CG3339-PA... 27 9.8
>AY058302-1|AAL13531.1| 493|Drosophila melanogaster GH06357p
protein.
Length = 493
Score = 109 bits (262), Expect = 2e-24
Identities = 50/67 (74%), Positives = 55/67 (82%)
Frame = +3
Query: 255 VANLQGVGDPKKGSALXYAYIDVRDEYRDDHTRLSVWVLDGDPGHTNLLKFALSEGTFPX 434
+A LQGV DPKKGS L YAYIDV+DEYRDD TRL VWVLDGDPGHTNLL +AL+E +
Sbjct: 66 IAKLQGVEDPKKGSGLEYAYIDVKDEYRDDMTRLGVWVLDGDPGHTNLLHYALNETNYAH 125
Query: 435 TLVXLTV 455
TLV LTV
Sbjct: 126 TLVILTV 132
Score = 79.8 bits (188), Expect = 2e-15
Identities = 39/70 (55%), Positives = 48/70 (68%)
Frame = +1
Query: 85 TNGQANGLKSKKKENGDGKDNLWSAILEEVQXQGNTKLPSNKXVLVLGDNXTGKTSLWQT 264
TN + KKK+ K+NLWSAIL EVQ QG+TKLPSNK VLVLGDN TGKT+L
Sbjct: 9 TNALTSSFTMKKKDAAAEKENLWSAILNEVQTQGSTKLPSNKSVLVLGDNATGKTTLIAK 68
Query: 265 CKVLETQRRG 294
+ +E ++G
Sbjct: 69 LQGVEDPKKG 78
>AE014298-1573|AAN09289.1| 493|Drosophila melanogaster CG1938-PD,
isoform D protein.
Length = 493
Score = 109 bits (262), Expect = 2e-24
Identities = 50/67 (74%), Positives = 55/67 (82%)
Frame = +3
Query: 255 VANLQGVGDPKKGSALXYAYIDVRDEYRDDHTRLSVWVLDGDPGHTNLLKFALSEGTFPX 434
+A LQGV DPKKGS L YAYIDV+DEYRDD TRL VWVLDGDPGHTNLL +AL+E +
Sbjct: 66 IAKLQGVEDPKKGSGLEYAYIDVKDEYRDDMTRLGVWVLDGDPGHTNLLHYALNETNYAH 125
Query: 435 TLVXLTV 455
TLV LTV
Sbjct: 126 TLVILTV 132
Score = 79.8 bits (188), Expect = 2e-15
Identities = 39/70 (55%), Positives = 48/70 (68%)
Frame = +1
Query: 85 TNGQANGLKSKKKENGDGKDNLWSAILEEVQXQGNTKLPSNKXVLVLGDNXTGKTSLWQT 264
TN + KKK+ K+NLWSAIL EVQ QG+TKLPSNK VLVLGDN TGKT+L
Sbjct: 9 TNALTSSFTMKKKDAAAEKENLWSAILNEVQTQGSTKLPSNKSVLVLGDNATGKTTLIAK 68
Query: 265 CKVLETQRRG 294
+ +E ++G
Sbjct: 69 LQGVEDPKKG 78
>AE014298-1572|AAN09288.1| 493|Drosophila melanogaster CG1938-PC,
isoform C protein.
Length = 493
Score = 109 bits (262), Expect = 2e-24
Identities = 50/67 (74%), Positives = 55/67 (82%)
Frame = +3
Query: 255 VANLQGVGDPKKGSALXYAYIDVRDEYRDDHTRLSVWVLDGDPGHTNLLKFALSEGTFPX 434
+A LQGV DPKKGS L YAYIDV+DEYRDD TRL VWVLDGDPGHTNLL +AL+E +
Sbjct: 66 IAKLQGVEDPKKGSGLEYAYIDVKDEYRDDMTRLGVWVLDGDPGHTNLLHYALNETNYAH 125
Query: 435 TLVXLTV 455
TLV LTV
Sbjct: 126 TLVILTV 132
Score = 79.8 bits (188), Expect = 2e-15
Identities = 39/70 (55%), Positives = 48/70 (68%)
Frame = +1
Query: 85 TNGQANGLKSKKKENGDGKDNLWSAILEEVQXQGNTKLPSNKXVLVLGDNXTGKTSLWQT 264
TN + KKK+ K+NLWSAIL EVQ QG+TKLPSNK VLVLGDN TGKT+L
Sbjct: 9 TNALTSSFTMKKKDAAAEKENLWSAILNEVQTQGSTKLPSNKSVLVLGDNATGKTTLIAK 68
Query: 265 CKVLETQRRG 294
+ +E ++G
Sbjct: 69 LQGVEDPKKG 78
>AE014298-1571|AAF48011.2| 493|Drosophila melanogaster CG1938-PA,
isoform A protein.
Length = 493
Score = 109 bits (262), Expect = 2e-24
Identities = 50/67 (74%), Positives = 55/67 (82%)
Frame = +3
Query: 255 VANLQGVGDPKKGSALXYAYIDVRDEYRDDHTRLSVWVLDGDPGHTNLLKFALSEGTFPX 434
+A LQGV DPKKGS L YAYIDV+DEYRDD TRL VWVLDGDPGHTNLL +AL+E +
Sbjct: 66 IAKLQGVEDPKKGSGLEYAYIDVKDEYRDDMTRLGVWVLDGDPGHTNLLHYALNETNYAH 125
Query: 435 TLVXLTV 455
TLV LTV
Sbjct: 126 TLVILTV 132
Score = 79.8 bits (188), Expect = 2e-15
Identities = 39/70 (55%), Positives = 48/70 (68%)
Frame = +1
Query: 85 TNGQANGLKSKKKENGDGKDNLWSAILEEVQXQGNTKLPSNKXVLVLGDNXTGKTSLWQT 264
TN + KKK+ K+NLWSAIL EVQ QG+TKLPSNK VLVLGDN TGKT+L
Sbjct: 9 TNALTSSFTMKKKDAAAEKENLWSAILNEVQTQGSTKLPSNKSVLVLGDNATGKTTLIAK 68
Query: 265 CKVLETQRRG 294
+ +E ++G
Sbjct: 69 LQGVEDPKKG 78
>AE014298-1575|AAN09291.1| 398|Drosophila melanogaster CG1938-PB,
isoform B protein.
Length = 398
Score = 58.4 bits (135), Expect = 5e-09
Identities = 26/36 (72%), Positives = 29/36 (80%)
Frame = +3
Query: 348 TRLSVWVLDGDPGHTNLLKFALSEGTFPXTLVXLTV 455
TRL VWVLDGDPGHTNLL +AL+E + TLV LTV
Sbjct: 2 TRLGVWVLDGDPGHTNLLHYALNETNYAHTLVILTV 37
>X54251-1|CAA38152.1| 1596|Drosophila melanogaster nuclear protein
protein.
Length = 1596
Score = 27.9 bits (59), Expect = 7.4
Identities = 16/55 (29%), Positives = 23/55 (41%)
Frame = +1
Query: 82 DTNGQANGLKSKKKENGDGKDNLWSAILEEVQXQGNTKLPSNKXVLVLGDNXTGK 246
+TN N + N +G +NL +E VQ T P+N + N T K
Sbjct: 287 NTNNNGNSTNNNGGSNNNGSENLTKFSVEIVQQLEFTTSPANSQPQQISTNVTVK 341
>AE014297-4119|ABI31211.1| 4685|Drosophila melanogaster CG3339-PB,
isoform B protein.
Length = 4685
Score = 27.5 bits (58), Expect = 9.8
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +1
Query: 214 VLVLGDNXTGKTSLWQTCKVLETQR 288
V ++G+ TGKT +WQT + ET R
Sbjct: 2293 VFIVGNAGTGKTKIWQTLR--ETYR 2315
>AE014297-4118|AAF56699.2| 4543|Drosophila melanogaster CG3339-PA,
isoform A protein.
Length = 4543
Score = 27.5 bits (58), Expect = 9.8
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +1
Query: 214 VLVLGDNXTGKTSLWQTCKVLETQR 288
V ++G+ TGKT +WQT + ET R
Sbjct: 2151 VFIVGNAGTGKTKIWQTLR--ETYR 2173
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,729,141
Number of Sequences: 53049
Number of extensions: 326554
Number of successful extensions: 820
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 797
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 820
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1622204766
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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