Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060750.seq
(641 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861; ... 136 4e-31
UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498... 136 6e-31
UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941; ... 135 1e-30
UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;... 134 1e-30
UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2; En... 129 6e-29
UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;... 124 2e-27
UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI... 123 4e-27
UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179; ... 117 3e-25
UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181; ... 115 8e-25
UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa group|... 115 8e-25
UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular or... 114 2e-24
UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1; Na... 114 2e-24
UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2 pol... 112 6e-24
UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825; ... 111 1e-23
UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7; Ec... 111 1e-23
UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3; Alphaproteob... 111 2e-23
UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9; Co... 108 1e-22
UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alp... 107 3e-22
UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida stellata|... 100 6e-20
UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517; ... 97 2e-19
UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15; F... 96 6e-19
UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107; ... 90 5e-17
UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida stellata|... 89 8e-17
UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26; B... 88 1e-16
UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30; P... 87 4e-16
UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42; N... 86 8e-16
UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16; B... 83 4e-15
UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3; Bacteria|... 83 7e-15
UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2; Roseiflexus|... 82 1e-14
UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3; Th... 82 1e-14
UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7; Eu... 82 1e-14
UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=... 81 2e-14
UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 81 2e-14
UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441; ... 80 4e-14
UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 80 4e-14
UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subuni... 80 5e-14
UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 79 7e-14
UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4... 77 5e-13
UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16; c... 76 8e-13
UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17; B... 75 1e-12
UniRef50_Q6RJT8 Cluster: Cytochrome c oxidase subunit 2; n=1; Ha... 73 4e-12
UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase, sub... 73 4e-12
UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Eugl... 72 1e-11
UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2; Br... 72 1e-11
UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 72 1e-11
UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48; O... 72 1e-11
UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1; Peri... 71 2e-11
UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5; Sulfol... 71 3e-11
UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 70 6e-11
UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93; A... 70 6e-11
UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III ... 70 6e-11
UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5; Na... 69 1e-10
UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2; Cystobacteri... 69 1e-10
UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobac... 68 2e-10
UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;... 68 2e-10
UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 67 4e-10
UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit... 66 9e-10
UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase polype... 66 9e-10
UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106; ... 65 1e-09
UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455; ... 65 2e-09
UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30; Proteobacte... 65 2e-09
UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5; P... 64 2e-09
UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.... 64 2e-09
UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacil... 64 3e-09
UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2; Acidobacteri... 64 4e-09
UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126; ... 64 4e-09
UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI... 64 4e-09
UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit ... 63 5e-09
UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1; Bl... 63 6e-09
UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol oxid... 63 6e-09
UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=... 62 8e-09
UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13; ... 62 1e-08
UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3; Rhodobacte... 61 2e-08
UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2; Rh... 60 3e-08
UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4 pre... 60 3e-08
UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI... 60 3e-08
UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15; Proteob... 59 1e-07
UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1; Mu... 59 1e-07
UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa gro... 59 1e-07
UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein; ... 59 1e-07
UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2; D... 58 2e-07
UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3; Proteobacter... 58 2e-07
UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium... 58 2e-07
UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=... 56 7e-07
UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|R... 56 7e-07
UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|R... 55 1e-06
UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1; Pl... 54 3e-06
UniRef50_Q9TCV5 Cluster: Cytochrome c oxidase subunit I; n=6; Di... 53 7e-06
UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1; My... 50 4e-05
UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1; Ap... 46 6e-04
UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;... 45 0.001
UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3; Ha... 45 0.002
UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1; Te... 44 0.002
UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Ae... 42 0.010
UniRef50_Q9MFX8 Cluster: Cytochrome oxidase I; n=5; Echinometra ... 42 0.013
UniRef50_Q9B9T9 Cluster: Cytochrome oxidase subunit 1; n=7; Locu... 37 0.36
UniRef50_O86945 Cluster: Sub-unit I of an aa3-type cytochrome ox... 37 0.48
UniRef50_A5URU0 Cluster: Cytochrome c oxidase, subunit I; n=4; C... 36 1.1
UniRef50_Q2Y5N3 Cluster: Integral membrane proteins containing u... 35 1.9
UniRef50_O67937 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 35 1.9
UniRef50_P98004 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 34 3.4
UniRef50_Q48874 Cluster: SakB; n=2; Lactobacillus sakei|Rep: Sak... 33 5.9
UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1; Wa... 33 5.9
>UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861;
root|Rep: Cytochrome c oxidase subunit 1 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 516
Score = 136 bits (329), Expect = 4e-31
Identities = 68/124 (54%), Positives = 79/124 (63%)
Frame = +1
Query: 256 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKET 435
+LLTDRNLNT+FFDPAGGGDPILYQHLF FFGHPEVYILILPGFGIISH+++ GKKE
Sbjct: 208 MLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHVVAYYAGKKEP 267
Query: 436 FXXXXXXXXXXXXXXXXFIV*AHHNSL*V*ILXHEHIXXXXXXXXAVPTGIKIFR*LATI 615
F FIV AHH + A+PTG+K+F LAT+
Sbjct: 268 FGYMGMVWAMMAIGLLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATL 327
Query: 616 HGNS 627
HG +
Sbjct: 328 HGGA 331
Score = 64.1 bits (149), Expect = 3e-09
Identities = 36/70 (51%), Positives = 40/70 (57%)
Frame = +2
Query: 2 GTR*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLP 181
GT TVYPPL+ N+AH G SVDL IFSLHLAG+SS S Q P
Sbjct: 123 GTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTTINMKPPTISQYQTP 182
Query: 182 LFV*AVGITA 211
LFV AV +TA
Sbjct: 183 LFVWAVLVTA 192
>UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498;
root|Rep: Cytochrome c oxidase subunit 1 - Homo sapiens
(Human)
Length = 513
Score = 136 bits (328), Expect = 6e-31
Identities = 68/124 (54%), Positives = 80/124 (64%)
Frame = +1
Query: 256 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKET 435
+LLTDRNLNT+FFDPAGGGDPILYQHLF FFGHPEVYILILPGFG+ISHI++ GKKE
Sbjct: 208 MLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEP 267
Query: 436 FXXXXXXXXXXXXXXXXFIV*AHHNSL*V*ILXHEHIXXXXXXXXAVPTGIKIFR*LATI 615
F FIV AHH + A+PTG+K+F LAT+
Sbjct: 268 FGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATL 327
Query: 616 HGNS 627
HG++
Sbjct: 328 HGSN 331
Score = 59.3 bits (137), Expect = 8e-08
Identities = 34/70 (48%), Positives = 39/70 (55%)
Frame = +2
Query: 2 GTR*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLP 181
GT TVYPPL+ N +H G SVDL IFSLHLAG+SS + Q P
Sbjct: 123 GTGWTVYPPLAGNYSHPGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTP 182
Query: 182 LFV*AVGITA 211
LFV +V ITA
Sbjct: 183 LFVWSVLITA 192
>UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Ophisurus macrorhynchos
Length = 546
Score = 135 bits (326), Expect = 1e-30
Identities = 67/124 (54%), Positives = 79/124 (63%)
Frame = +1
Query: 256 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKET 435
+LLTDRNLNT+FFDPAGGGDPILYQHLF FFGHPEVYILILPGFG+ISH+++ GKKE
Sbjct: 208 MLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHVVTYYAGKKEP 267
Query: 436 FXXXXXXXXXXXXXXXXFIV*AHHNSL*V*ILXHEHIXXXXXXXXAVPTGIKIFR*LATI 615
F FIV AHH + A+PTG+K+F LAT+
Sbjct: 268 FGYMGMVWAMMAIGLLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATL 327
Query: 616 HGNS 627
HG +
Sbjct: 328 HGGA 331
Score = 61.7 bits (143), Expect = 1e-08
Identities = 34/70 (48%), Positives = 40/70 (57%)
Frame = +2
Query: 2 GTR*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLP 181
GT TVYPPL+ N+AH G SVDL IFSLHLAG+SS + Q P
Sbjct: 123 GTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAITQYQTP 182
Query: 182 LFV*AVGITA 211
LFV +V +TA
Sbjct: 183 LFVWSVLVTA 192
>UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;
Bilateria|Rep: Cytochrome c oxidase subunit I - Cotesia
melitaearum (Parasitoid wasp)
Length = 499
Score = 134 bits (325), Expect = 1e-30
Identities = 70/122 (57%), Positives = 77/122 (63%)
Frame = +1
Query: 256 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKET 435
+LLTDRN+NTSFFDP+GGGDPILYQHLF FFGHPEVYILILPGFGIISH+I E GKKET
Sbjct: 192 MLLTDRNMNTSFFDPSGGGDPILYQHLFWFFGHPEVYILILPGFGIISHMIFNESGKKET 251
Query: 436 FXXXXXXXXXXXXXXXXFIV*AHHNSL*V*ILXHEHIXXXXXXXXAVPTGIKIFR*LATI 615
F FIV AHH + A+PTGIKIF +AT
Sbjct: 252 FGMLGMIYAMLTIGFLGFIVWAHHMFTIGMDVDTRAYFTSATMIIAIPTGIKIFSWMATF 311
Query: 616 HG 621
G
Sbjct: 312 SG 313
Score = 58.0 bits (134), Expect = 2e-07
Identities = 36/84 (42%), Positives = 41/84 (48%)
Frame = +2
Query: 2 GTR*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLP 181
GT TVYPPLS + H G SVDL IFSLHLAG SS + D++
Sbjct: 107 GTGWTVYPPLSLILGHGGMSVDLGIFSLHLAGASSIMGAVNFITTILNMRSNLFNMDKMS 166
Query: 182 LFV*AVGITAFXXXXXXXXXAGAI 253
LF +V ITA AGAI
Sbjct: 167 LFSWSVFITAILLLLSLPVLAGAI 190
>UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2;
Endopterygota|Rep: Cytochrome c oxidase subunit I -
Copitarsia incommoda
Length = 150
Score = 129 bits (311), Expect = 6e-29
Identities = 60/96 (62%), Positives = 65/96 (67%)
Frame = +3
Query: 273 KLKYIIF*SCWRRRPNFISTFILIFWTS*SLYFNFTRIWYNFSYYFTRKRKKRNFWLFRN 452
K KYIIF S W F+STFILIFWT SLYFNFT IWYNFSYYF K KK N W+F +
Sbjct: 7 KFKYIIFWSSWSSWSYFMSTFILIFWTPSSLYFNFTSIWYNFSYYFPSKSKKGNLWVFSD 66
Query: 453 NLCYTSNWVIRIHCLSSS*FTVGIDIXTRAYFTSAT 560
NLCY SNW+I I+CLSSS YFTSAT
Sbjct: 67 NLCYISNWIISIYCLSSSYIYSSNSYWYSTYFTSAT 102
>UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 527
Score = 124 bits (298), Expect = 2e-27
Identities = 68/124 (54%), Positives = 75/124 (60%)
Frame = +1
Query: 256 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKET 435
+LLTDRN NT+FFDPAGGGDPILYQHLF FFGHPEVYILILPGFGIISHI+S G K
Sbjct: 211 MLLTDRNFNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHIVSTFSG-KPV 269
Query: 436 FXXXXXXXXXXXXXXXXFIV*AHHNSL*V*ILXHEHIXXXXXXXXAVPTGIKIFR*LATI 615
F F+V AHH + AVPTGIKIF +AT+
Sbjct: 270 FGYLGMVYAMISIGVLGFLVWAHHMFTVGLDVDTRAYFTAATMIIAVPTGIKIFSWIATM 329
Query: 616 HGNS 627
G S
Sbjct: 330 WGGS 333
Score = 64.1 bits (149), Expect = 3e-09
Identities = 37/84 (44%), Positives = 45/84 (53%)
Frame = +2
Query: 2 GTR*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLP 181
GT TVYPPLS +H G +VDLAIFSLHL+G+SS + +LP
Sbjct: 126 GTGWTVYPPLSGITSHSGGAVDLAIFSLHLSGVSSILGSINFITTIFNMRGPGMTMHRLP 185
Query: 182 LFV*AVGITAFXXXXXXXXXAGAI 253
LFV +V +TAF AGAI
Sbjct: 186 LFVWSVLVTAFLLLLSLPVLAGAI 209
>UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI8
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI8 (EC
3.1.-.-)]; n=103; Eukaryota|Rep: Probable intron-encoded
endonuclease aI8 precursor [Contains: Truncated
non-functional cytochrome oxidase 1; Intron-encoded
endonuclease aI8 (EC 3.1.-.-)] - Ustilago maydis (Smut
fungus)
Length = 645
Score = 123 bits (296), Expect = 4e-27
Identities = 65/124 (52%), Positives = 76/124 (61%)
Frame = +1
Query: 256 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKET 435
+LLTDRN NTSF+DPAGGGDPILYQHLF FFGHPEVYILI+PGFG++SHI+S G K
Sbjct: 208 MLLTDRNFNTSFYDPAGGGDPILYQHLFWFFGHPEVYILIIPGFGMVSHIVSAFSG-KPV 266
Query: 436 FXXXXXXXXXXXXXXXXFIV*AHHNSL*V*ILXHEHIXXXXXXXXAVPTGIKIFR*LATI 615
F F+V +HH + AVPTGIKIF LAT+
Sbjct: 267 FGYLGMVYAMFSIGILGFLVWSHHMYAVGLDVDTRAYFTAATMIIAVPTGIKIFSWLATL 326
Query: 616 HGNS 627
+G S
Sbjct: 327 YGGS 330
Score = 63.7 bits (148), Expect = 4e-09
Identities = 38/84 (45%), Positives = 44/84 (52%)
Frame = +2
Query: 2 GTR*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLP 181
GT TVYPPLS +H G SVDLAIFSLHL+GISS + +LP
Sbjct: 123 GTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMTLHKLP 182
Query: 182 LFV*AVGITAFXXXXXXXXXAGAI 253
LFV A+ +TA AGAI
Sbjct: 183 LFVWAIFVTAILLLLSLPVLAGAI 206
>UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Chondrus crispus (Carragheen)
Length = 532
Score = 117 bits (281), Expect = 3e-25
Identities = 65/120 (54%), Positives = 72/120 (60%)
Frame = +1
Query: 256 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKET 435
+LLTDRN NTSFFD +GGGDPILYQHLF FFGHPEVYILILPGFG+ISHI+S +K
Sbjct: 216 MLLTDRNFNTSFFDASGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVS-TFSRKPV 274
Query: 436 FXXXXXXXXXXXXXXXXFIV*AHHNSL*V*ILXHEHIXXXXXXXXAVPTGIKIFR*LATI 615
F FIV AHH + AVPTGIKIF +ATI
Sbjct: 275 FGYIGMVYAMVSIGVLGFIVWAHHMYTVGLDVDTRAYFTAATMIIAVPTGIKIFSWIATI 334
Score = 61.7 bits (143), Expect = 1e-08
Identities = 36/84 (42%), Positives = 45/84 (53%)
Frame = +2
Query: 2 GTR*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLP 181
GT TVYPPLSS +H G +VDLAIFSLH++G SS S ++P
Sbjct: 131 GTGWTVYPPLSSIQSHSGGAVDLAIFSLHISGASSILGAVNFISTILNMRSPGQSMYRIP 190
Query: 182 LFV*AVGITAFXXXXXXXXXAGAI 253
LFV ++ +TAF AGAI
Sbjct: 191 LFVWSILVTAFLLLLAVPVLAGAI 214
>UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181;
Coelomata|Rep: Cytochrome c oxidase subunit I - Piculus
rubiginosus
Length = 504
Score = 115 bits (277), Expect = 8e-25
Identities = 50/61 (81%), Positives = 56/61 (91%)
Frame = +1
Query: 256 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKET 435
+LLTDRNLNT+FFDPAGGGDPILYQHLF FFGHPEVYILILPGFG+ISH+++ GKKE
Sbjct: 209 MLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHVVTYYAGKKEP 268
Query: 436 F 438
F
Sbjct: 269 F 269
Score = 65.3 bits (152), Expect = 1e-09
Identities = 38/70 (54%), Positives = 41/70 (58%)
Frame = +2
Query: 2 GTR*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLP 181
GT TVYPPL+ N+AH G SVDLAIFSLHLAGISS S Q P
Sbjct: 124 GTGWTVYPPLAGNLAHAGASVDLAIFSLHLAGISSILGAINFITTAINMKPPAISQYQTP 183
Query: 182 LFV*AVGITA 211
LFV +V ITA
Sbjct: 184 LFVWSVLITA 193
>UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa
group|Rep: Endonuclease - Saccharomyces servazzii
(Yeast)
Length = 675
Score = 115 bits (277), Expect = 8e-25
Identities = 62/124 (50%), Positives = 72/124 (58%)
Frame = +1
Query: 256 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKET 435
+LL DRN NTSFF+ AGGGDPI YQH F FFGHPEVYILI+PGFGI+SHI+S KK
Sbjct: 209 MLLMDRNFNTSFFEVAGGGDPIFYQHAFWFFGHPEVYILIIPGFGIVSHIVS-TYSKKPV 267
Query: 436 FXXXXXXXXXXXXXXXXFIV*AHHNSL*V*ILXHEHIXXXXXXXXAVPTGIKIFR*LATI 615
F F+V +HH + A+PTGIKIF LATI
Sbjct: 268 FGEISMVYAMASIGLLGFLVWSHHMYIVGLDADTRAYFTSATMIIAIPTGIKIFSWLATI 327
Query: 616 HGNS 627
+G S
Sbjct: 328 YGGS 331
Score = 63.3 bits (147), Expect = 5e-09
Identities = 37/71 (52%), Positives = 40/71 (56%)
Frame = +2
Query: 2 GTR*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLP 181
GT TVYPPLSS AH G SVDLAIFSLHL ISS S ++P
Sbjct: 124 GTGWTVYPPLSSIQAHSGPSVDLAIFSLHLTSISSLLGAINFIVTTLNMRTNGMSMHKMP 183
Query: 182 LFV*AVGITAF 214
LFV A+ ITAF
Sbjct: 184 LFVWAIFITAF 194
>UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular
organisms|Rep: Cytochrome-c oxidase - Jannaschia sp.
(strain CCS1)
Length = 628
Score = 114 bits (274), Expect = 2e-24
Identities = 60/120 (50%), Positives = 72/120 (60%)
Frame = +1
Query: 256 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKET 435
+LLTDRN T+FFDPAGGGDPIL+QH+F FFGHPEVYI+ILP FG+ISHI++ KK
Sbjct: 314 MLLTDRNFGTTFFDPAGGGDPILFQHIFWFFGHPEVYIVILPAFGVISHIVA-TFSKKPI 372
Query: 436 FXXXXXXXXXXXXXXXXFIV*AHHNSL*V*ILXHEHIXXXXXXXXAVPTGIKIFR*LATI 615
F F+V AHH L + AVPTGIKIF +AT+
Sbjct: 373 FGYLPMVYALVAIGGLGFVVWAHHMYTVGMTLTQQAYFMVATMVIAVPTGIKIFSWIATM 432
Score = 45.2 bits (102), Expect = 0.001
Identities = 25/80 (31%), Positives = 38/80 (47%)
Frame = +2
Query: 14 TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 193
T YPP+S+ R+VD AIF++H++G SS + ++PLF
Sbjct: 233 TFYPPISAQGVETSRAVDFAIFAVHVSGASSILGSINFITTFLNMRAPGMTLHKVPLFAW 292
Query: 194 AVGITAFXXXXXXXXXAGAI 253
+V +TA+ AGAI
Sbjct: 293 SVFVTAWLLLLSLPVLAGAI 312
>UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1;
Naegleria gruberi|Rep: Cytochrome c oxidase subunit 1 -
Naegleria gruberi
Length = 633
Score = 114 bits (274), Expect = 2e-24
Identities = 61/124 (49%), Positives = 72/124 (58%)
Frame = +1
Query: 256 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKET 435
+LL DRN NTSF+DP GGGD +LYQHLF FFGHPEVYILILPGFG++SHII+ KK
Sbjct: 212 LLLFDRNFNTSFYDPVGGGDVVLYQHLFWFFGHPEVYILILPGFGLVSHIIA-TFSKKRV 270
Query: 436 FXXXXXXXXXXXXXXXXFIV*AHHNSL*V*ILXHEHIXXXXXXXXAVPTGIKIFR*LATI 615
F FIV AHH + A+PTGIK+F +AT+
Sbjct: 271 FGHVPMIAAMLMIGLIGFIVWAHHMYTSGIDTSTKAYFTAATMVIAIPTGIKVFNWIATM 330
Query: 616 HGNS 627
G S
Sbjct: 331 WGGS 334
Score = 56.4 bits (130), Expect = 5e-07
Identities = 35/84 (41%), Positives = 39/84 (46%)
Frame = +2
Query: 2 GTR*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLP 181
GT TVYPPLSS +H G SVDL IFS HL GI S LP
Sbjct: 127 GTGWTVYPPLSSLQSHSGASVDLMIFSFHLVGIGSIVAAINFICTIFYYKNEAMFNKDLP 186
Query: 182 LFV*AVGITAFXXXXXXXXXAGAI 253
LFV +V +T+F A AI
Sbjct: 187 LFVWSVAVTSFLVIVAIPVLAAAI 210
>UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2
polyprotein; n=1; Phaeosphaeria nodorum SN15|Rep:
Cytochrome oxidase subunits 1 and 2 polyprotein -
Phaeosphaeria nodorum SN15
Length = 789
Score = 112 bits (270), Expect = 6e-24
Identities = 63/124 (50%), Positives = 71/124 (57%)
Frame = +1
Query: 256 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKET 435
++LTDRN NTSFF+ AGGGDPILYQHLF FFGHPEVYILI+PGFGIIS IS K
Sbjct: 209 MVLTDRNFNTSFFEVAGGGDPILYQHLFWFFGHPEVYILIIPGFGIISTTIS-ANSNKSV 267
Query: 436 FXXXXXXXXXXXXXXXXFIV*AHHNSL*V*ILXHEHIXXXXXXXXAVPTGIKIFR*LATI 615
F F+V +HH + AVPTGIKIF LAT
Sbjct: 268 FGYLGMVYAMCSIGILGFVVWSHHMYTVGLDVDTRAYFTAATLIIAVPTGIKIFSWLATC 327
Query: 616 HGNS 627
+G S
Sbjct: 328 YGGS 331
Score = 53.2 bits (122), Expect = 5e-06
Identities = 35/84 (41%), Positives = 39/84 (46%)
Frame = +2
Query: 2 GTR*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLP 181
GT T+YPPLS +H G SVDLAIF LHL+GISS +L
Sbjct: 124 GTGWTLYPPLSGIQSHSGPSVDLAIFGLHLSGISSLLGAMNFMTTTFNMRSPGIRLHKLI 183
Query: 182 LFV*AVGITAFXXXXXXXXXAGAI 253
LF AV ITA AG I
Sbjct: 184 LFAWAVVITAVLLLLSLPVLAGGI 207
>UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Paracoccidioides brasiliensis
Length = 710
Score = 111 bits (268), Expect = 1e-23
Identities = 62/124 (50%), Positives = 72/124 (58%)
Frame = +1
Query: 256 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKET 435
+LLTDRNLNTSF++ AGGGD ILYQHLF FFGHPEVYILI+PGFGIIS +IS K
Sbjct: 235 MLLTDRNLNTSFYELAGGGDAILYQHLFWFFGHPEVYILIIPGFGIISTVIS-ANSNKNV 293
Query: 436 FXXXXXXXXXXXXXXXXFIV*AHHNSL*V*ILXHEHIXXXXXXXXAVPTGIKIFR*LATI 615
F FIV +HH + A+PTG+KIF LAT
Sbjct: 294 FGYLGMVYAMMSIGLLGFIVWSHHMYTVGLDVDTRAYFTAATLIIAIPTGVKIFSWLATC 353
Query: 616 HGNS 627
+G S
Sbjct: 354 YGGS 357
Score = 47.2 bits (107), Expect = 3e-04
Identities = 32/84 (38%), Positives = 36/84 (42%)
Frame = +2
Query: 2 GTR*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLP 181
GT T+YPPLS +H VDL IF LHL+GISS +L
Sbjct: 150 GTGWTLYPPLSGIQSHSSMGVDLGIFGLHLSGISSLLGAINFIATLLNMRSPGIKLHKLA 209
Query: 182 LFV*AVGITAFXXXXXXXXXAGAI 253
LF AV ITA A AI
Sbjct: 210 LFGWAVVITAVLLLLSLPVLAAAI 233
>UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7;
Echinoida|Rep: Cytochrome c oxidase subunit I -
Echinometra oblonga
Length = 386
Score = 111 bits (267), Expect = 1e-23
Identities = 59/133 (44%), Positives = 74/133 (55%)
Frame = +1
Query: 229 TTCFSWSY*ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 408
++ SW N T+FFDPAGGGD IL+QHLF FFGHPEVYILILPGFG+ISH+I
Sbjct: 176 SSSISWGNNNASYSSNYYTTFFDPAGGGDXILFQHLFXFFGHPEVYILILPGFGMISHVI 235
Query: 409 SQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHNSL*V*ILXHEHIXXXXXXXXAVPTGI 588
+ GK+E F F+V AHH + AVPTGI
Sbjct: 236 AHYSGKREPFGYLGMVYAMIAIGVLGFLVWAHHMFTVGMDVDTRAYFTAATMIIAVPTGI 295
Query: 589 KIFR*LATIHGNS 627
K+F +AT+ G++
Sbjct: 296 KVFSWMATLQGSN 308
>UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3;
Alphaproteobacteria|Rep: Cytochrome-c oxidase -
Sphingomonas sp. SKA58
Length = 556
Score = 111 bits (266), Expect = 2e-23
Identities = 62/124 (50%), Positives = 72/124 (58%)
Frame = +1
Query: 256 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKET 435
+LLTDRN T+F+D AGGGDP LYQHLF FFGHPEVYI+ILPGFGIIS I+S +K
Sbjct: 251 MLLTDRNFGTTFYDAAGGGDPELYQHLFWFFGHPEVYIMILPGFGIISQIVS-TFSRKPV 309
Query: 436 FXXXXXXXXXXXXXXXXFIV*AHHNSL*V*ILXHEHIXXXXXXXXAVPTGIKIFR*LATI 615
F F+V AHH + + AVPTGIKIF +ATI
Sbjct: 310 FGYLGMAYAMVAIGVVGFVVWAHHMFTTGMSVNVKMYFTAATMVIAVPTGIKIFSWIATI 369
Query: 616 HGNS 627
G S
Sbjct: 370 WGGS 373
Score = 47.2 bits (107), Expect = 3e-04
Identities = 31/84 (36%), Positives = 41/84 (48%)
Frame = +2
Query: 2 GTR*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLP 181
GT TVY PLS++ G +VD+AI SLH+AG SS + ++P
Sbjct: 167 GTGWTVYAPLSTS-GSAGPAVDMAILSLHIAGASSILGAINFITTILNMRAPGMTLHKMP 225
Query: 182 LFV*AVGITAFXXXXXXXXXAGAI 253
LFV +V +TAF A AI
Sbjct: 226 LFVWSVLVTAFLLLLALPVLAAAI 249
>UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9;
Coelomata|Rep: Cytochrome c oxidase subunit I - Lingula
unguis
Length = 573
Score = 108 bits (260), Expect = 1e-22
Identities = 56/122 (45%), Positives = 69/122 (56%)
Frame = +1
Query: 256 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKET 435
+LL DR+ +TSF+ P GGGDPIL+QHLF FFGHPEVYILILP FG+ISHI+ + K
Sbjct: 211 LLLLDRHFSTSFYYPEGGGDPILWQHLFWFFGHPEVYILILPAFGVISHILCRSSAKLHV 270
Query: 436 FXXXXXXXXXXXXXXXXFIV*AHHNSL*V*ILXHEHIXXXXXXXXAVPTGIKIFR*LATI 615
F F+V HH + + AVPTG+K+F LATI
Sbjct: 271 FGKIGMSWASMGIAWMGFLVWGHHMFVAGLDIDTRAYFTAATLMIAVPTGVKVFNWLATI 330
Query: 616 HG 621
G
Sbjct: 331 FG 332
Score = 41.9 bits (94), Expect = 0.013
Identities = 18/31 (58%), Positives = 25/31 (80%)
Frame = +2
Query: 14 TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 106
T+YPPLS++ G +DLA+FSLH+AG+SS
Sbjct: 129 TMYPPLSNSEFMDGLPIDLAVFSLHMAGMSS 159
>UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alpha
precursor (DNA endonuclease I-SceIV) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI5 alpha (EC 3.1.-.-) (Intron-encoded
endonuclease I- SceIV)]; n=2; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI5 alpha precursor (DNA
endonuclease I-SceIV) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI5 alpha (EC 3.1.-.-) (Intron-encoded endonuclease I-
SceIV)] - Saccharomyces cerevisiae (Baker's yeast)
Length = 630
Score = 107 bits (256), Expect = 3e-22
Identities = 56/114 (49%), Positives = 67/114 (58%)
Frame = +1
Query: 256 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKET 435
+LL DRN NTSFF+ +GGGDPILY+HLF FFGHPEVYILI+PGFGIISH++S KK
Sbjct: 209 MLLLDRNFNTSFFEVSGGGDPILYEHLFWFFGHPEVYILIIPGFGIISHVVS-TYSKKPV 267
Query: 436 FXXXXXXXXXXXXXXXXFIV*AHHNSL*V*ILXHEHIXXXXXXXXAVPTGIKIF 597
F F+V +HH + A+PTGIKIF
Sbjct: 268 FGEISMVYAMASIGLLGFLVWSHHMYIVGLDADTRAYFTSATMIIAIPTGIKIF 321
Score = 60.5 bits (140), Expect = 3e-08
Identities = 35/71 (49%), Positives = 40/71 (56%)
Frame = +2
Query: 2 GTR*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLP 181
GT TVYPPLSS AH G SVDLAIF+LHL ISS + +LP
Sbjct: 124 GTGWTVYPPLSSIQAHSGPSVDLAIFALHLTSISSLLGAINFIVTTLNMRTNGMTMHKLP 183
Query: 182 LFV*AVGITAF 214
LFV ++ ITAF
Sbjct: 184 LFVWSIFITAF 194
>UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida
stellata|Rep: Cox1-i5 protein - Candida stellata (Yeast)
Length = 763
Score = 99.5 bits (237), Expect = 6e-20
Identities = 55/124 (44%), Positives = 68/124 (54%)
Frame = +1
Query: 256 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKET 435
+LL DRN NTSFF +GGGDP+LY+H+F FFGHPEVYILI+P FG++S I+ Q KK
Sbjct: 226 MLLMDRNFNTSFFVVSGGGDPLLYEHIFWFFGHPEVYILIVPVFGVVSQIV-QVYAKKPI 284
Query: 436 FXXXXXXXXXXXXXXXXFIV*AHHNSL*V*ILXHEHIXXXXXXXXAVPTGIKIFR*LATI 615
F F V +HH A+PTG KIF LATI
Sbjct: 285 FGKIGMIYAMASIGFLGFCVWSHHMFTVGLDADSRAYFSGASLIIAIPTGSKIFSWLATI 344
Query: 616 HGNS 627
+G +
Sbjct: 345 YGGT 348
Score = 55.2 bits (127), Expect = 1e-06
Identities = 29/70 (41%), Positives = 41/70 (58%)
Frame = +2
Query: 2 GTR*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLP 181
G+ T+YPPL+S +H G S+D+AIF+LHL+G+SS + +LP
Sbjct: 141 GSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGMDYSKLP 200
Query: 182 LFV*AVGITA 211
LFV +V ITA
Sbjct: 201 LFVWSVLITA 210
>UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Schistosoma mansoni (Blood fluke)
Length = 609
Score = 97.5 bits (232), Expect = 2e-19
Identities = 50/114 (43%), Positives = 61/114 (53%)
Frame = +1
Query: 256 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKET 435
+LL DRN T+FF+P+GGGDPIL+QHLF FFGHPEVY+LILPGFGI+SHI +
Sbjct: 298 MLLFDRNFGTAFFEPSGGGDPILFQHLFWFFGHPEVYVLILPGFGIVSHICMSLSNNDSS 357
Query: 436 FXXXXXXXXXXXXXXXXFIV*AHHNSL*V*ILXHEHIXXXXXXXXAVPTGIKIF 597
F +V HH + VPTGIK+F
Sbjct: 358 FGYYGLICAMASIVCLGSVVWGHHMFMVGFDSLTGVFFSSITMIIGVPTGIKVF 411
Score = 33.9 bits (74), Expect = 3.4
Identities = 18/31 (58%), Positives = 21/31 (67%)
Frame = +2
Query: 14 TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 106
T+YPPLS G VD +FSLHLAG+SS
Sbjct: 223 TLYPPLSI-WEGSGFGVDYLMFSLHLAGVSS 252
>UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Trichoderma reesei (Hypocrea jecorina)
Length = 635
Score = 96.3 bits (229), Expect = 6e-19
Identities = 43/57 (75%), Positives = 48/57 (84%)
Frame = +1
Query: 256 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGK 426
++LTDRN NTSFF+ AGGGDPIL+QHLF FFGHPEVYILI+PGFGIIS IS K
Sbjct: 234 MVLTDRNFNTSFFEVAGGGDPILFQHLFWFFGHPEVYILIIPGFGIISTTISSSSNK 290
Score = 45.2 bits (102), Expect = 0.001
Identities = 20/29 (68%), Positives = 24/29 (82%)
Frame = +2
Query: 20 YPPLSSNIAHRGRSVDLAIFSLHLAGISS 106
YPPLS +H G SVDLAIF+LHL+G+SS
Sbjct: 162 YPPLSGLQSHSGPSVDLAIFALHLSGVSS 190
Score = 33.5 bits (73), Expect = 4.4
Identities = 17/35 (48%), Positives = 23/35 (65%), Gaps = 2/35 (5%)
Frame = +3
Query: 462 YTSNWVIRIHCLS--SS*FTVGIDIXTRAYFTSAT 560
Y WV R + L+ +TVG+D+ TRAYFT+AT
Sbjct: 334 YNFVWVNRKYLLTILHHMYTVGLDVDTRAYFTAAT 368
>UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107;
Alveolata|Rep: Cytochrome c oxidase subunit 1 -
Plasmodium falciparum
Length = 476
Score = 89.8 bits (213), Expect = 5e-17
Identities = 39/52 (75%), Positives = 44/52 (84%)
Frame = +1
Query: 256 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 411
+LL+D + NT FFDP GDPILYQHLF FFGHPEVYILILP FG+ISH+IS
Sbjct: 214 MLLSDLHFNTLFFDPTFAGDPILYQHLFWFFGHPEVYILILPAFGVISHVIS 265
>UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida
stellata|Rep: Cox1-i4 protein - Candida stellata (Yeast)
Length = 676
Score = 89.0 bits (211), Expect = 8e-17
Identities = 43/84 (51%), Positives = 53/84 (63%)
Frame = +1
Query: 256 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKET 435
+LL DRN NTSFF +GGGDP+LY+H+F FFGHPEVYILI+P FG++S I+ Q KK
Sbjct: 226 MLLMDRNFNTSFFVVSGGGDPLLYEHIFWFFGHPEVYILIVPVFGVVSQIV-QVYAKKPI 284
Query: 436 FXXXXXXXXXXXXXXXXFIV*AHH 507
F F V +HH
Sbjct: 285 FGKIGMIYAMASIGFLGFCVWSHH 308
Score = 55.2 bits (127), Expect = 1e-06
Identities = 29/70 (41%), Positives = 41/70 (58%)
Frame = +2
Query: 2 GTR*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLP 181
G+ T+YPPL+S +H G S+D+AIF+LHL+G+SS + +LP
Sbjct: 141 GSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGMDYSKLP 200
Query: 182 LFV*AVGITA 211
LFV +V ITA
Sbjct: 201 LFVWSVLITA 210
>UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26;
Bilateria|Rep: Cytochrome c oxidase subunit I - Samia
cynthia ricini (Indian eri silkmoth)
Length = 510
Score = 88.2 bits (209), Expect = 1e-16
Identities = 50/84 (59%), Positives = 51/84 (60%)
Frame = +2
Query: 2 GTR*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLP 181
GT TVYPPLSSNIAH G SVDLAIFSLHLAGISS SFDQ+P
Sbjct: 120 GTGWTVYPPLSSNIAHGGSSVDLAIFSLHLAGISSILGAINFITTIINMRMNNLSFDQMP 179
Query: 182 LFV*AVGITAFXXXXXXXXXAGAI 253
LFV AVGITAF AGAI
Sbjct: 180 LFVWAVGITAFLLLLSLPVLAGAI 203
Score = 76.2 bits (179), Expect = 6e-13
Identities = 32/36 (88%), Positives = 35/36 (97%)
Frame = +1
Query: 256 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEV 363
+LLTDRNLNTSFFDPAGGGDPILYQHLF FFGHP++
Sbjct: 205 MLLTDRNLNTSFFDPAGGGDPILYQHLFWFFGHPKL 240
>UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30;
Panarthropoda|Rep: Cytochrome c oxidase subunit I -
Pagyris cymothoe
Length = 487
Score = 86.6 bits (205), Expect = 4e-16
Identities = 38/40 (95%), Positives = 39/40 (97%)
Frame = +1
Query: 256 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILI 375
+LLTDRNLNTSFFDPAGGGDPILYQHLF FFGHPEVYILI
Sbjct: 181 MLLTDRNLNTSFFDPAGGGDPILYQHLFWFFGHPEVYILI 220
Score = 85.4 bits (202), Expect = 1e-15
Identities = 48/84 (57%), Positives = 50/84 (59%)
Frame = +2
Query: 2 GTR*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLP 181
GT TVYPPLSSNIAH G SVDLAIFSLHLAGISS SFDQ+P
Sbjct: 96 GTGWTVYPPLSSNIAHGGSSVDLAIFSLHLAGISSILGAINFITTIINMRINKMSFDQMP 155
Query: 182 LFV*AVGITAFXXXXXXXXXAGAI 253
LF+ AVGITA AGAI
Sbjct: 156 LFIWAVGITALLLLLSLPVLAGAI 179
>UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42;
Nematoda|Rep: Cytochrome c oxidase subunit I -
Onchocerca volvulus
Length = 548
Score = 85.8 bits (203), Expect = 8e-16
Identities = 48/123 (39%), Positives = 60/123 (48%)
Frame = +1
Query: 259 LLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETF 438
LL DRN NTSF+D GG+P+LYQHLF FFGHPEVY++ILP FGIIS + K F
Sbjct: 219 LLLDRNFNTSFYDTKKGGNPLLYQHLFWFFGHPEVYVIILPVFGIISEAVLFLTDKDRLF 278
Query: 439 XXXXXXXXXXXXXXXXFIV*AHHNSL*V*ILXHEHIXXXXXXXXAVPTGIKIFR*LATIH 618
V HH + A+P+ +KIF L T
Sbjct: 279 GQTSMTFASIWIAVLGTSVWGHHMYTAGLDIDTRTYFSAATMIIAIPSAVKIFNWLGTFF 338
Query: 619 GNS 627
G++
Sbjct: 339 GSN 341
>UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16;
Bacteria|Rep: Cytochrome c oxidase subunit I -
Synechococcus sp. (strain CC9311)
Length = 564
Score = 83.4 bits (197), Expect = 4e-15
Identities = 46/120 (38%), Positives = 59/120 (49%)
Frame = +1
Query: 256 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKET 435
+LL D + TSFF P GGGDP+L+QH F F+ HP VY+L+LP FGI S + +K
Sbjct: 234 MLLFDLSFGTSFFRPEGGGDPVLFQHFFWFYSHPAVYVLVLPVFGIFSELF-PVYARKPL 292
Query: 436 FXXXXXXXXXXXXXXXXFIV*AHHNSL*V*ILXHEHIXXXXXXXXAVPTGIKIFR*LATI 615
F IV AHH HI A+PTG+K+F L T+
Sbjct: 293 FGYRFVAIASFGITFLSLIVWAHHMFYTGTPNWMRHIFMFTTMLIAIPTGVKVFAWLGTL 352
>UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3;
Bacteria|Rep: Cytochrome caa3 oxidase - Planctomyces
maris DSM 8797
Length = 754
Score = 82.6 bits (195), Expect = 7e-15
Identities = 48/122 (39%), Positives = 63/122 (51%)
Frame = +1
Query: 256 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKET 435
+LL DR L ++FFDP GG +L+QH F FGHPEVYILILPGFG+IS +I +K
Sbjct: 227 MLLIDRWLGSAFFDPTRGGSAVLWQHYFWIFGHPEVYILILPGFGMISEVI-PVFSRKPI 285
Query: 436 FXXXXXXXXXXXXXXXXFIV*AHHNSL*V*ILXHEHIXXXXXXXXAVPTGIKIFR*LATI 615
+ + V AHH + + A+PTGIK+F AT+
Sbjct: 286 YGYTFVAASSVAIVLLGYGVWAHHMFAVGLGMYADIFFAVGSLLIAIPTGIKVFNWTATL 345
Query: 616 HG 621
G
Sbjct: 346 WG 347
>UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2;
Roseiflexus|Rep: Cytochrome-c oxidase - Roseiflexus sp.
RS-1
Length = 641
Score = 82.2 bits (194), Expect = 1e-14
Identities = 51/119 (42%), Positives = 60/119 (50%)
Frame = +1
Query: 259 LLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETF 438
LL DR+ T FF P GGD +L+QHLF FFGHPEVYILILP GIIS ++ +K F
Sbjct: 227 LLFDRHFGTRFFLPNLGGDAVLWQHLFWFFGHPEVYILILPTMGIISEVL-PTFSRKPIF 285
Query: 439 XXXXXXXXXXXXXXXXFIV*AHHNSL*V*ILXHEHIXXXXXXXXAVPTGIKIFR*LATI 615
F+V AHH AVPTG+KIF LAT+
Sbjct: 286 GYAFVAYSGVAIGFLGFLVWAHHMFAVGLGPLANAFFGAASFLIAVPTGVKIFNWLATM 344
>UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3;
Theileria|Rep: Cytochrome c oxidase subunit 1 -
Theileria parva
Length = 481
Score = 81.8 bits (193), Expect = 1e-14
Identities = 34/52 (65%), Positives = 43/52 (82%)
Frame = +1
Query: 256 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 411
++ DR+ NT FF+ + GDP+LYQHLF FFGHPEVYI+ILPGFGIIS ++S
Sbjct: 214 MVFLDRHYNTMFFESSNSGDPVLYQHLFWFFGHPEVYIMILPGFGIISLLLS 265
Score = 33.5 bits (73), Expect = 4.4
Identities = 17/35 (48%), Positives = 25/35 (71%)
Frame = +2
Query: 2 GTR*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 106
GT T+YPPLS+++++ G +D IF L AGI+S
Sbjct: 131 GTGWTLYPPLSTSLSNVG--IDFIIFGLLAAGIAS 163
>UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7;
Eukaryota|Rep: Cytochrome c oxidase subunit 1 -
Leishmania tarentolae (Sauroleishmania tarentolae)
Length = 549
Score = 81.8 bits (193), Expect = 1e-14
Identities = 34/51 (66%), Positives = 43/51 (84%)
Frame = +1
Query: 256 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 408
++L DRN NTSF+D GGGD IL+QH+F FFGHPEVYI++LP FG+IS I+
Sbjct: 211 LILCDRNFNTSFYDVVGGGDLILFQHIFWFFGHPEVYIILLPVFGLISTIV 261
Score = 32.7 bits (71), Expect = 7.7
Identities = 23/80 (28%), Positives = 30/80 (37%)
Frame = +2
Query: 14 TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 193
T+YP L H + D +F++HL GISS SF LF+
Sbjct: 130 TLYPTLICIDFHSSLACDFVMFAVHLLGISSILNSINLLGTLFCCRRKFFSFLSWSLFIW 189
Query: 194 AVGITAFXXXXXXXXXAGAI 253
A ITA AG +
Sbjct: 190 AALITAILLIITLPVLAGGV 209
>UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=4;
cellular organisms|Rep: Cytochrome C oxidase subunit I
/III - Pyrobaculum aerophilum
Length = 800
Score = 81.4 bits (192), Expect = 2e-14
Identities = 45/127 (35%), Positives = 64/127 (50%), Gaps = 5/127 (3%)
Frame = +1
Query: 256 ILLTDRNLNTSFF-----DPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQER 420
+LL +R+L FF DPA GDP L+QH+F FFGHPEVYIL+LP G++S +I Q
Sbjct: 213 MLLLERHLGMHFFTPVPGDPAASGDPRLFQHIFWFFGHPEVYILVLPAMGLVSEVI-QRM 271
Query: 421 GKKETFXXXXXXXXXXXXXXXXFIV*AHHNSL*V*ILXHEHIXXXXXXXXAVPTGIKIFR 600
++ + F V HH V A+P+G+K+F
Sbjct: 272 ARRRAYGYTAIAISSVAIASISFAVWMHHMFTAVQDFAPRVAMAIATMAVAIPSGVKVFN 331
Query: 601 *LATIHG 621
+AT++G
Sbjct: 332 WVATLYG 338
>UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1);
n=59; Cyanobacteria|Rep: Cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1) -
Synechocystis sp. (strain PCC 6803)
Length = 551
Score = 81.4 bits (192), Expect = 2e-14
Identities = 49/122 (40%), Positives = 59/122 (48%)
Frame = +1
Query: 256 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKET 435
+L D TSFF+P GGGDP++YQHLF F+ HP VYI+ILP FG+IS +I +K
Sbjct: 219 LLSFDLIAGTSFFNPVGGGDPVVYQHLFWFYSHPAVYIMILPFFGVISEVI-PVHARKPI 277
Query: 436 FXXXXXXXXXXXXXXXXFIV*AHHNSL*V*ILXHEHIXXXXXXXXAVPTGIKIFR*LATI 615
F IV AHH AVPTGIKIF T+
Sbjct: 278 FGYRAIAYSSLAISFLGLIVWAHHMFTSGTPGWLRMFFMATTMLIAVPTGIKIFSWCGTL 337
Query: 616 HG 621
G
Sbjct: 338 WG 339
>UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441;
Bilateria|Rep: Cytochrome c oxidase subunit 1 - Pantodon
buchholtzi (Butterflyfish)
Length = 184
Score = 80.2 bits (189), Expect = 4e-14
Identities = 43/95 (45%), Positives = 51/95 (53%)
Frame = +1
Query: 343 FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHNSL*V 522
FFGHPEVYILILPGFG+ISHI++ GKKE F FIV AHH
Sbjct: 2 FFGHPEVYILILPGFGMISHIVAYYSGKKEPFGYMGMVWAMMAIGLLGFIVWAHHMFTVG 61
Query: 523 *ILXHEHIXXXXXXXXAVPTGIKIFR*LATIHGNS 627
+ A+PTG+K+F LAT+HG S
Sbjct: 62 MDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGS 96
>UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Caa-3605 subunit 1) (Oxidase
aa(3) subunit 1); n=13; Bacillaceae|Rep: Cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Caa-3605
subunit 1) (Oxidase aa(3) subunit 1) - Bacillus subtilis
Length = 622
Score = 80.2 bits (189), Expect = 4e-14
Identities = 47/124 (37%), Positives = 62/124 (50%)
Frame = +1
Query: 256 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKET 435
+++ DR T+FF+P GG+ ++++HLF FGHPEVYILILP FGI S +I +K
Sbjct: 217 LMMLDRLFGTNFFNPELGGNTVIWEHLFWIFGHPEVYILILPAFGIFSEVI-PVFARKRL 275
Query: 436 FXXXXXXXXXXXXXXXXFIV*AHHNSL*V*ILXHEHIXXXXXXXXAVPTGIKIFR*LATI 615
F F+V HH I A+PTGIKIF L TI
Sbjct: 276 FGYSSMVFAIVLIGFLGFMVWVHHMFTTGLGPIANAIFAVATMAIAIPTGIKIFNWLLTI 335
Query: 616 HGNS 627
G +
Sbjct: 336 WGGN 339
>UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Alternative cytochrome c oxidase
polypeptide I) (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=25; Bacteria|Rep: Alternative cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Alternative cytochrome c
oxidase polypeptide I) (Cytochrome BB3 subunit 1)
(Oxidase BB(3) subunit 1) - Bradyrhizobium japonicum
Length = 591
Score = 79.8 bits (188), Expect = 5e-14
Identities = 51/134 (38%), Positives = 66/134 (49%), Gaps = 11/134 (8%)
Frame = +1
Query: 256 ILLTDRNLNTSFFDPA----------GGGDPILYQHLF*FFGHPEVYILILPGFGIISHI 405
+LL DR L TSFF P GGG P+L+QHLF FFGHPEVYI+ LP FGI+S +
Sbjct: 238 MLLLDRLLGTSFFMPTLVEMGQLSKYGGGSPLLFQHLFWFFGHPEVYIVALPAFGIVSDL 297
Query: 406 ISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHNSL*V*ILXHEHIXXXXXXXXAVPTG 585
IS +K F F+V AHH + A+PT
Sbjct: 298 IS-THARKNIFGYRMMVWAIVAIGALSFVVWAHHMYVSGMYPYFGFFFATTTLIIAIPTA 356
Query: 586 IKIFR*LATI-HGN 624
IK++ + T+ HG+
Sbjct: 357 IKVYNWVLTLWHGD 370
>UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1;
Dicyema misakiense|Rep: Cytochrome c oxidase subunit I -
Dicyema misakiense
Length = 473
Score = 79.4 bits (187), Expect = 7e-14
Identities = 47/120 (39%), Positives = 61/120 (50%)
Frame = +1
Query: 256 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKET 435
++LTD++L T F+D GGDP+LYQHLF FFGHPEVY++ILP FG+ S I Q
Sbjct: 192 LILTDKHLGTCFYDATMGGDPLLYQHLFWFFGHPEVYVVILPVFGLFSSSI-QLSSLHRI 250
Query: 436 FXXXXXXXXXXXXXXXXFIV*AHHNSL*V*ILXHEHIXXXXXXXXAVPTGIKIFR*LATI 615
+V AHH + AVPTGIKIF L+++
Sbjct: 251 PGELSLVLAMASIALIGSVVWAHHMYTAGLDIDTRSYFTAATMIIAVPTGIKIFTWLSSL 310
Score = 34.3 bits (75), Expect = 2.5
Identities = 18/31 (58%), Positives = 22/31 (70%)
Frame = +2
Query: 14 TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 106
T YPPLSS SV+ ++FSLHLAGI+S
Sbjct: 117 TFYPPLSS----LSPSVEFSVFSLHLAGIAS 143
>UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4;
Halobacteriaceae|Rep: Cytochrome c oxidase polypeptide 1
- Halobacterium salinarium (Halobacterium halobium)
Length = 593
Score = 76.6 bits (180), Expect = 5e-13
Identities = 35/58 (60%), Positives = 44/58 (75%)
Frame = +1
Query: 256 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKK 429
+LL DRN T+FF AGG DPI +QHLF FFGHPEVY+L+LP GI+S I+ + G+K
Sbjct: 263 MLLLDRNFGTTFFTVAGG-DPIFWQHLFWFFGHPEVYVLVLPPMGIVSLILPKFSGRK 319
>UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16;
cellular organisms|Rep: Cytochrome C oxidase subunit I -
Rhizobium loti (Mesorhizobium loti)
Length = 623
Score = 75.8 bits (178), Expect = 8e-13
Identities = 45/119 (37%), Positives = 61/119 (51%)
Frame = +1
Query: 259 LLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETF 438
L+ DR + T FF+PA GGD +L+QHLF FFGHPEVYI+ LP G++S I++ ++ F
Sbjct: 225 LILDRLVGTHFFNPAEGGDVLLWQHLFWFFGHPEVYIIFLPAVGMVSSIVATFT-QRPVF 283
Query: 439 XXXXXXXXXXXXXXXXFIV*AHHNSL*V*ILXHEHIXXXXXXXXAVPTGIKIFR*LATI 615
F + HH + E AVP G++IF LATI
Sbjct: 284 GYLAMVMALIATGVLAFGLWVHHMFVAGLPRLGESFFTASSMAIAVPAGLQIFCWLATI 342
>UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17;
Bacteria|Rep: Cytochrome C oxidase subunit I -
Symbiobacterium thermophilum
Length = 628
Score = 75.4 bits (177), Expect = 1e-12
Identities = 47/122 (38%), Positives = 58/122 (47%)
Frame = +1
Query: 256 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKET 435
+L+ DR +FF+ GG + YQHLF FGHPEVYILILP GIIS +I +K
Sbjct: 228 MLMFDRTFAANFFEVLRGGSVVFYQHLFWTFGHPEVYILILPAMGIISEVI-PVHARKML 286
Query: 436 FXXXXXXXXXXXXXXXXFIV*AHHNSL*V*ILXHEHIXXXXXXXXAVPTGIKIFR*LATI 615
F F V +HH I AVPTG+KIF L+T+
Sbjct: 287 FGYSVMVFSTALIGFMGFTVWSHHMFTVGMGPVVNSIFSLTTMAIAVPTGVKIFNWLSTM 346
Query: 616 HG 621
G
Sbjct: 347 WG 348
>UniRef50_Q6RJT8 Cluster: Cytochrome c oxidase subunit 2; n=1;
Harmonia axyridis|Rep: Cytochrome c oxidase subunit 2 -
Harmonia axyridis (Multicolored Asian lady beetle)
Length = 193
Score = 73.3 bits (172), Expect = 4e-12
Identities = 30/57 (52%), Positives = 36/57 (63%)
Frame = +3
Query: 330 TFILIFWTS*SLYFNFTRIWYNFSYYFTRKRKKRNFWLFRNNLCYTSNWVIRIHCLS 500
+ ++IFW+S SLYFN IWYNF YY+T K K W F NNLCY S W I +S
Sbjct: 2 SLVMIFWSSSSLYFNSPSIWYNFPYYYTSKSGKNCLWFFSNNLCYISYWTSSICSMS 58
>UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase,
subunit I; n=2; Halobacteriaceae|Rep: Cytochrome-c-like
terminal oxidase, subunit I - Haloquadratum walsbyi
(strain DSM 16790)
Length = 634
Score = 73.3 bits (172), Expect = 4e-12
Identities = 35/58 (60%), Positives = 44/58 (75%)
Frame = +1
Query: 256 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKK 429
+LL DRN TSFF AG G IL+QHLF FFGHPEVYI++LP GIIS+I+ + G++
Sbjct: 295 MLLFDRNFGTSFF--AGEGGAILWQHLFWFFGHPEVYIIVLPPMGIISYILPRFSGRR 350
>UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Euglena
gracilis|Rep: Cytochrome oxidase subunit I - Euglena
gracilis
Length = 495
Score = 72.1 bits (169), Expect = 1e-11
Identities = 41/113 (36%), Positives = 58/113 (51%)
Frame = +1
Query: 259 LLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETF 438
LL DRN+N++ +D G DP+LYQHLF FFGHPEVY++ILP FG+ S I++ K+ F
Sbjct: 221 LLLDRNINSTIYDVIG--DPVLYQHLFWFFGHPEVYVIILPVFGLTSLILTSII-HKDIF 277
Query: 439 XXXXXXXXXXXXXXXXFIV*AHHNSL*V*ILXHEHIXXXXXXXXAVPTGIKIF 597
+ V AHH + ++PT +K+F
Sbjct: 278 GREGMMYCIISIGVVGYFVWAHHMFTVGLDIDSRSYFSIATSIISIPTSVKMF 330
>UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2;
Bruchidius|Rep: Cytochrome c oxidase subunit I -
Bruchidius aff. varius GLK-2003
Length = 339
Score = 72.1 bits (169), Expect = 1e-11
Identities = 42/88 (47%), Positives = 46/88 (52%)
Frame = +1
Query: 358 EVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHNSL*V*ILXH 537
EVYILILPGFG+ISHIISQE GKKE F F+V AHH +
Sbjct: 155 EVYILILPGFGMISHIISQESGKKEAFGTLGMIYAMMAIGLLGFVVWAHHMFTVGMDVDT 214
Query: 538 EHIXXXXXXXXAVPTGIKIFR*LATIHG 621
AVPTGIK+F LAT HG
Sbjct: 215 RAYFTSATMIIAVPTGIKVFSWLATFHG 242
>UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 485
Score = 71.7 bits (168), Expect = 1e-11
Identities = 41/121 (33%), Positives = 60/121 (49%)
Frame = +1
Query: 256 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKET 435
+L D+ L T+FF+PA GGDP++YQ++F F+ HP VY+ +LP FG S II ++
Sbjct: 164 MLFLDKYLGTNFFNPAKGGDPLIYQNIFWFYSHPVVYVQVLPVFGFYSEIIPVF-ARRPL 222
Query: 436 FXXXXXXXXXXXXXXXXFIV*AHHNSL*V*ILXHEHIXXXXXXXXAVPTGIKIFR*LATI 615
F F + HH + + AVPTGIKIF + T+
Sbjct: 223 FGYTSMVFAVWAITAVSFFLWIHHMFVSGVPNWTRVLFSYTTLLIAVPTGIKIFNWMLTL 282
Query: 616 H 618
+
Sbjct: 283 Y 283
>UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48;
Oligohymenophorea|Rep: Cytochrome c oxidase subunit 1 -
Tetrahymena pyriformis
Length = 698
Score = 71.7 bits (168), Expect = 1e-11
Identities = 31/54 (57%), Positives = 40/54 (74%)
Frame = +1
Query: 268 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKK 429
DR+ T+FF+ A GGDPIL QHLF FFGHPEVY+LI+P FG I+ I+ ++
Sbjct: 373 DRHWQTTFFEYAYGGDPILSQHLFWFFGHPEVYVLIIPTFGFINMIVPHNNTRR 426
>UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1;
Periclimenes thermohydrophilus|Rep: Cytochrome oxidase
subunit I - Periclimenes thermohydrophilus
Length = 217
Score = 70.9 bits (166), Expect = 2e-11
Identities = 42/85 (49%), Positives = 49/85 (57%)
Frame = -3
Query: 255 LIAPAKTGSDNNNKNAVIPTAHTNKGN*SNDILFNRXXXXXXXXXXXXXIDEIPAKCSEK 76
+IAPA TGS++N+K AV T TN G S I +R I+E PAKC+EK
Sbjct: 28 VIAPASTGSESNSKMAVSNTDQTNSGMRSMVIPADRMLITVVMKFTAPKIEETPAKCNEK 87
Query: 75 IARSTDLPLCAILDESGG*TVHLVP 1
I STD P CAI SGG TVH VP
Sbjct: 88 IPMSTDAPACAIPLASGGYTVHPVP 112
Score = 45.2 bits (102), Expect = 0.001
Identities = 20/27 (74%), Positives = 23/27 (85%)
Frame = -1
Query: 338 NKC*YKIGSPPPAGSKNDVFKFRSVNN 258
NKC + IGSPPPAGSK +VFKFRSV +
Sbjct: 1 NKC-WSIGSPPPAGSKKEVFKFRSVKS 26
>UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5;
Sulfolobaceae|Rep: Quinol oxidase subunit 1/3 -
Sulfolobus acidocaldarius
Length = 788
Score = 70.5 bits (165), Expect = 3e-11
Identities = 40/119 (33%), Positives = 60/119 (50%), Gaps = 1/119 (0%)
Frame = +1
Query: 268 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXX 447
+R T FFD A GG P+L+Q LF FFGHPEVYILILP G++S ++ + ++E F
Sbjct: 210 ERLWGTPFFDSALGGSPVLWQQLFWFFGHPEVYILILPAMGLVSELL-PKMARREIFGYT 268
Query: 448 XXXXXXXXXXXXXFI-V*AHHNSL*V*ILXHEHIXXXXXXXXAVPTGIKIFR*LATIHG 621
+ V HH + + + A+P+G+K+ AT++G
Sbjct: 269 AIALSSIAIAFLSALGVWMHHMFTAIDNTLVQIVSSATTMAIAIPSGVKVLNWTATLYG 327
>UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1;
Myxococcus xanthus DK 1622|Rep: Cytochrome c oxidase,
subunit I - Myxococcus xanthus (strain DK 1622)
Length = 556
Score = 69.7 bits (163), Expect = 6e-11
Identities = 28/53 (52%), Positives = 40/53 (75%), Gaps = 1/53 (1%)
Frame = +1
Query: 256 ILLTDRNL-NTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 411
+L+T NL FDPA GGDP+L+QHLF F+ HP VYI++LP FG++S +++
Sbjct: 233 VLVTVENLFGFGMFDPARGGDPVLFQHLFWFYSHPAVYIMVLPSFGVMSEVVA 285
>UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93;
Actinobacteria (class)|Rep: Cytochrome c oxidase subunit
1 - Corynebacterium glutamicum (Brevibacterium flavum)
Length = 584
Score = 69.7 bits (163), Expect = 6e-11
Identities = 45/119 (37%), Positives = 58/119 (48%)
Frame = +1
Query: 259 LLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETF 438
+L DR L +DPA GG +L+QHLF FFGHPEVY+L LP FGI+S II +K F
Sbjct: 235 VLYDRKLGGHLYDPANGGS-LLWQHLFWFFGHPEVYVLALPFFGIVSEII-PVFSRKPMF 292
Query: 439 XXXXXXXXXXXXXXXXFIV*AHHNSL*V*ILXHEHIXXXXXXXXAVPTGIKIFR*LATI 615
V AHH + +L +VPTG+K F + T+
Sbjct: 293 GYVGLIFATLSIGALSMAVWAHHMFVTGAVLL--PFFSFMTFLISVPTGVKFFNWVGTM 349
>UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III (EC
1.9.3.1) (Cytochrome c aa(3) subunit 1); n=2; Thermus
thermophilus|Rep: Cytochrome c oxidase polypeptide I+III
(EC 1.9.3.1) (Cytochrome c aa(3) subunit 1) - Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 791
Score = 69.7 bits (163), Expect = 6e-11
Identities = 38/122 (31%), Positives = 60/122 (49%)
Frame = +1
Query: 256 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKET 435
++L +R + S+F+PA GGDP+L+Q F F+ HP VY+++LP GI++ + S +K
Sbjct: 218 LVLLERKIGLSWFNPAVGGDPVLFQQFFWFYSHPTVYVMLLPYLGILAEVAS-TFARKPL 276
Query: 436 FXXXXXXXXXXXXXXXXFIV*AHHNSL*V*ILXHEHIXXXXXXXXAVPTGIKIFR*LATI 615
F +V AHH + AVPTG+K+F + T+
Sbjct: 277 FGYRQMVWAQMGIVVLGTMVWAHHMFTVGESTLFQIAFAFFTALIAVPTGVKLFNIIGTL 336
Query: 616 HG 621
G
Sbjct: 337 WG 338
>UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5;
Naupactini|Rep: Cytochrome c oxidase subunit I -
Galapaganus collaris
Length = 406
Score = 68.9 bits (161), Expect = 1e-10
Identities = 29/33 (87%), Positives = 31/33 (93%)
Frame = +1
Query: 256 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 354
+LLTDRN+NTSFFDPAGGGDPILYQHLF F GH
Sbjct: 127 MLLTDRNINTSFFDPAGGGDPILYQHLFWFXGH 159
Score = 65.7 bits (153), Expect = 9e-10
Identities = 39/84 (46%), Positives = 45/84 (53%)
Frame = +2
Query: 2 GTR*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLP 181
GT TV PPLS+NIAH G SVDLAIFSLH+AG+ S + ++P
Sbjct: 42 GTGWTVSPPLSANIAHEGSSVDLAIFSLHMAGVXSILGAINFISTVLNMRPSGMTPXRMP 101
Query: 182 LFV*AVGITAFXXXXXXXXXAGAI 253
LFV AV ITA AGAI
Sbjct: 102 LFVWAVEITAILLLLSLPVLAGAI 125
>UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2;
Cystobacterineae|Rep: Cytochrome-c oxidase -
Anaeromyxobacter sp. Fw109-5
Length = 596
Score = 68.5 bits (160), Expect = 1e-10
Identities = 32/57 (56%), Positives = 40/57 (70%), Gaps = 5/57 (8%)
Frame = +1
Query: 256 ILLTDRNLNTSFFDPA-----GGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 411
+LL DR+ T FF GGGDPIL+QHLF FGHPEVYI+ILP +GI+ ++S
Sbjct: 241 LLLLDRSFGTEFFVAGASAVRGGGDPILWQHLFWIFGHPEVYIMILPAWGILGDVLS 297
>UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobacter
shibae DFL 12|Rep: Cytochrome-c oxidase -
Dinoroseobacter shibae DFL 12
Length = 853
Score = 68.1 bits (159), Expect = 2e-10
Identities = 42/120 (35%), Positives = 59/120 (49%)
Frame = +1
Query: 256 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKET 435
+L +R L FFD GGDP+L+QHLF FGHPEVYI+ LP G+++ ++ G K
Sbjct: 250 LLEAERLLGLPFFDHTLGGDPLLWQHLFWLFGHPEVYIIFLPAAGMVATMLPTFVG-KPL 308
Query: 436 FXXXXXXXXXXXXXXXXFIV*AHHNSL*V*ILXHEHIXXXXXXXXAVPTGIKIFR*LATI 615
F F + AHH + + AVPTG++IF +AT+
Sbjct: 309 FGYGFAVAAVVTMSFLSFGLWAHHMFATGLPILSLSLFSAASTMVAVPTGVQIFCFIATL 368
>UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;
Aeropyrum pernix|Rep: Heme-copper oxidase subunit I+III
- Aeropyrum pernix
Length = 815
Score = 67.7 bits (158), Expect = 2e-10
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = +1
Query: 256 ILLTDRNLNTSFF-DPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGK 426
+LL DRNL T FF +PAGG +L+ HLF FFGHPEVYIL+ P G ++ +IS GK
Sbjct: 217 LLLLDRNLGTEFFLNPAGGA--LLWDHLFWFFGHPEVYILLFPALGAMADVISTFSGK 272
>UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1); n=45;
Bacillales|Rep: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1) - Bacillus
subtilis
Length = 649
Score = 66.9 bits (156), Expect = 4e-10
Identities = 42/121 (34%), Positives = 56/121 (46%)
Frame = +1
Query: 256 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKET 435
+L DR FF GG P+L+ +LF +GHPEVYI+ILP FGI S IIS +K+
Sbjct: 248 LLSFDRLFGAHFFTLEAGGMPMLWANLFWIWGHPEVYIVILPAFGIFSEIIS-SFARKQL 306
Query: 436 FXXXXXXXXXXXXXXXXFIV*AHHNSL*V*ILXHEHIXXXXXXXXAVPTGIKIFR*LATI 615
F F+V HH ++PTG+KIF L T+
Sbjct: 307 FGYKAMVGSIIAISVLSFLVWTHHFFTMGNSASVNSFFSITTMAISIPTGVKIFNWLFTM 366
Query: 616 H 618
+
Sbjct: 367 Y 367
>UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit I;
n=22; Bacteria|Rep: Cytochrome o ubiquinol oxidase,
subunit I - Chromobacterium violaceum
Length = 680
Score = 65.7 bits (153), Expect = 9e-10
Identities = 41/121 (33%), Positives = 58/121 (47%)
Frame = +1
Query: 256 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKET 435
+L DR L+ FF GG+ ++Y +LF +GHPEVYIL+LP FGI S ++S GK+
Sbjct: 253 MLALDRYLDFHFFTAELGGNAMMYLNLFWAWGHPEVYILVLPAFGIFSEVVSTFAGKR-L 311
Query: 436 FXXXXXXXXXXXXXXXXFIV*AHHNSL*V*ILXHEHIXXXXXXXXAVPTGIKIFR*LATI 615
F F+V HH ++PTG+K+F L TI
Sbjct: 312 FGHKSMIYASGAISVLGFMVWLHHFFTMGSGANVNAFFGIATMIISIPTGVKLFNWLFTI 371
Query: 616 H 618
+
Sbjct: 372 Y 372
>UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase
polypeptide I (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=20; cellular organisms|Rep: Alternative
Cytochrome c oxidase polypeptide I (Cytochrome BB3
subunit 1) (Oxidase BB(3) subunit 1) - Microscilla
marina ATCC 23134
Length = 635
Score = 65.7 bits (153), Expect = 9e-10
Identities = 47/134 (35%), Positives = 64/134 (47%), Gaps = 11/134 (8%)
Frame = +1
Query: 256 ILLTDRNLNTSFFDP----AG------GGDPILYQHLF*FFGHPEVYILILPGFGIISHI 405
+L+ DR+L TSFF AG GG P+L+QHLF F GHPEVYI+++P GI S +
Sbjct: 260 LLIFDRSLGTSFFLSEIYIAGEALHHQGGSPVLFQHLFWFLGHPEVYIVLIPALGITSEV 319
Query: 406 ISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHNSL*V*ILXHEHIXXXXXXXXAVPTG 585
I+ +K F FIV AHH + + AVP+
Sbjct: 320 IA-TNARKPIFGYKAMIGSILGIAVLSFIVWAHHMFVTGMNPFLGSVFMFLTLIIAVPSA 378
Query: 586 IKIFR*LATI-HGN 624
+K F + T+ GN
Sbjct: 379 VKSFNYITTLWRGN 392
>UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Homalopoma maculosa
Length = 219
Score = 65.3 bits (152), Expect = 1e-09
Identities = 39/84 (46%), Positives = 43/84 (51%)
Frame = +2
Query: 2 GTR*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLP 181
GT TVYPPLS N AH G SVDLAIFSLHLAG+SS + +
Sbjct: 106 GTGWTVYPPLSGNTAHAGPSVDLAIFSLHLAGVSSILGAVNFITTVINMRWGAMKIELVS 165
Query: 182 LFV*AVGITAFXXXXXXXXXAGAI 253
LFV +V ITA AGAI
Sbjct: 166 LFVWSVKITAILLLLSLPVLAGAI 189
Score = 62.1 bits (144), Expect = 1e-08
Identities = 26/28 (92%), Positives = 27/28 (96%)
Frame = +1
Query: 256 ILLTDRNLNTSFFDPAGGGDPILYQHLF 339
+LLTDRN NTSFFDPAGGGDPILYQHLF
Sbjct: 191 MLLTDRNFNTSFFDPAGGGDPILYQHLF 218
>UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455;
cellular organisms|Rep: Cytochrome c oxidase subunit I -
Pandaka lidwilli
Length = 507
Score = 64.9 bits (151), Expect = 2e-09
Identities = 38/70 (54%), Positives = 40/70 (57%)
Frame = +2
Query: 2 GTR*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLP 181
GT TVYPPL+ N+AH G SVDL IFSLHLAGISS S Q P
Sbjct: 112 GTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGISSILGAINFITTIMNMKPPAISQYQTP 171
Query: 182 LFV*AVGITA 211
LFV AV ITA
Sbjct: 172 LFVWAVLITA 181
Score = 33.1 bits (72), Expect = 5.9
Identities = 13/15 (86%), Positives = 15/15 (100%)
Frame = +1
Query: 256 ILLTDRNLNTSFFDP 300
+LLTDRNLNT+FFDP
Sbjct: 197 MLLTDRNLNTTFFDP 211
>UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30;
Proteobacteria|Rep: Cytochrome-c oxidase - Burkholderia
cenocepacia MC0-3
Length = 1004
Score = 64.9 bits (151), Expect = 2e-09
Identities = 28/53 (52%), Positives = 37/53 (69%)
Frame = +1
Query: 241 SWSY*ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIIS 399
S ++ +L DRN T FFD A GG P+L+QHLF F HP VY+++LP GI+S
Sbjct: 239 SLAFLLLWLDRNAGTHFFDVAHGGRPLLWQHLFWMFAHPWVYVVVLPAMGIVS 291
>UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5;
Proteobacteria|Rep: Cytochrome c oxidase, subunit I -
Mesorhizobium sp. (strain BNC1)
Length = 845
Score = 64.5 bits (150), Expect = 2e-09
Identities = 27/51 (52%), Positives = 36/51 (70%)
Frame = +1
Query: 256 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 408
+L +R+ FF GGDP+L+QHLF FFGHPEVYI+ LP G++S I+
Sbjct: 234 LLEIERSFGWPFFTAERGGDPLLWQHLFWFFGHPEVYIIFLPAAGLVSMIV 284
>UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.-)
(Ubiquinol oxidase polypeptide I) (Cytochrome o subunit
1) (Oxidase BO(3) subunit 1); n=240; Bacteria|Rep:
Ubiquinol oxidase subunit 1 (EC 1.10.3.-) (Ubiquinol
oxidase polypeptide I) (Cytochrome o subunit 1) (Oxidase
BO(3) subunit 1) - Pseudomonas putida
Length = 672
Score = 64.5 bits (150), Expect = 2e-09
Identities = 41/121 (33%), Positives = 56/121 (46%)
Frame = +1
Query: 256 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKET 435
+L DR L+ F GG+P++Y +LF +GHPEVYILILP FG+ S + S GK+
Sbjct: 252 LLTVDRYLDFHIFTNELGGNPMMYVNLFWAWGHPEVYILILPAFGVFSEVTSTFAGKR-L 310
Query: 436 FXXXXXXXXXXXXXXXXFIV*AHHNSL*V*ILXHEHIXXXXXXXXAVPTGIKIFR*LATI 615
F F V HH ++PTG+K+F L TI
Sbjct: 311 FGHHSMIYASGAIAVLGFAVWLHHFFTMGAGASVNTFFGLATMLISIPTGVKLFNWLFTI 370
Query: 616 H 618
+
Sbjct: 371 Y 371
>UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacillus
flagellatus KT|Rep: Cytochrome-c oxidase -
Methylobacillus flagellatus (strain KT / ATCC 51484 /
DSM 6875)
Length = 631
Score = 64.1 bits (149), Expect = 3e-09
Identities = 41/123 (33%), Positives = 58/123 (47%)
Frame = +1
Query: 256 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKET 435
+L DR FF A GDPIL+QHLF FFGHPEVYI+ +P G++S II ++
Sbjct: 231 MLALDRMAGMHFFT-AASGDPILWQHLFWFFGHPEVYIIFIPALGMVSSIIITFT-QRPI 288
Query: 436 FXXXXXXXXXXXXXXXXFIV*AHHNSL*V*ILXHEHIXXXXXXXXAVPTGIKIFR*LATI 615
F F + HH + A+P+G++IF +AT+
Sbjct: 289 FGYIPIVLSIVAIGFIGFGLWVHHMFTAGLPQLGSNFFTASSAMIAIPSGVQIFCWIATL 348
Query: 616 HGN 624
G+
Sbjct: 349 WGS 351
>UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2;
Acidobacteria|Rep: Cytochrome-c oxidase - Acidobacteria
bacterium (strain Ellin345)
Length = 595
Score = 63.7 bits (148), Expect = 4e-09
Identities = 33/62 (53%), Positives = 39/62 (62%), Gaps = 11/62 (17%)
Frame = +1
Query: 256 ILLTDRNLNTSFFDPAG-----------GGDPILYQHLF*FFGHPEVYILILPGFGIISH 402
+L DR TSFF P+G GG +L+QHLF FFGHPEVYI ILP GI+SH
Sbjct: 245 LLCLDRVAGTSFFIPSGLVFNDHVIPHGGGSALLWQHLFWFFGHPEVYIAILPAMGIVSH 304
Query: 403 II 408
I+
Sbjct: 305 IL 306
>UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Placozoan sp. BZ2423
Length = 498
Score = 63.7 bits (148), Expect = 4e-09
Identities = 38/84 (45%), Positives = 45/84 (53%)
Frame = +2
Query: 2 GTR*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLP 181
GT TVYPPL+S AH G SVD+AIFSLHLAG+SS + ++P
Sbjct: 124 GTGWTVYPPLASIQAHSGGSVDMAIFSLHLAGLSSILGAMNFITTVMNMRTPGMTMSRIP 183
Query: 182 LFV*AVGITAFXXXXXXXXXAGAI 253
LFV +V ITA AGAI
Sbjct: 184 LFVWSVLITAILLLLSLPVLAGAI 207
Score = 63.3 bits (147), Expect = 5e-09
Identities = 27/32 (84%), Positives = 29/32 (90%)
Frame = +1
Query: 256 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 351
+LLTDR NT+FFDPAGGGDPILYQHLF FFG
Sbjct: 209 MLLTDRYFNTTFFDPAGGGDPILYQHLFWFFG 240
>UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI5
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI5 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI5 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI5 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 536
Score = 63.7 bits (148), Expect = 4e-09
Identities = 38/84 (45%), Positives = 44/84 (52%)
Frame = +2
Query: 2 GTR*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLP 181
GT TVYPPLS +H G SVDLAIFSLHL+GISS + +LP
Sbjct: 123 GTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMTLHKLP 182
Query: 182 LFV*AVGITAFXXXXXXXXXAGAI 253
LFV A+ +TA AGAI
Sbjct: 183 LFVWAIFVTAILLLLSLPVLAGAI 206
Score = 60.9 bits (141), Expect = 3e-08
Identities = 25/28 (89%), Positives = 27/28 (96%)
Frame = +1
Query: 256 ILLTDRNLNTSFFDPAGGGDPILYQHLF 339
+LLTDRN NTSF+DPAGGGDPILYQHLF
Sbjct: 208 MLLTDRNFNTSFYDPAGGGDPILYQHLF 235
>UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit I;
n=1; Candidatus Carsonella ruddii PV|Rep: Cytochrome O
ubiquinol oxidase subunit I - Carsonella ruddii (strain
PV)
Length = 606
Score = 63.3 bits (147), Expect = 5e-09
Identities = 43/119 (36%), Positives = 53/119 (44%)
Frame = +1
Query: 259 LLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETF 438
+ DR L+T F+ GG +LY +L +GHPEVYILILP FGI S IIS K F
Sbjct: 248 IFLDRTLSTHFYSSFYGGQQMLYINLIWAWGHPEVYILILPSFGIFSEIISY-ICVKSVF 306
Query: 439 XXXXXXXXXXXXXXXXFIV*AHHNSL*V*ILXHEHIXXXXXXXXAVPTGIKIFR*LATI 615
F+V HH A+PTG+KIF + TI
Sbjct: 307 SYISLIYATISITVLSFLVWLHHFFTMGSGYLSNIFFSISTMIIAIPTGVKIFNWIFTI 365
>UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1;
Blastopirellula marina DSM 3645|Rep: Cytochrome c
oxidase subunit I - Blastopirellula marina DSM 3645
Length = 595
Score = 62.9 bits (146), Expect = 6e-09
Identities = 43/133 (32%), Positives = 61/133 (45%), Gaps = 11/133 (8%)
Frame = +1
Query: 256 ILLTDRNLNTSFFDP-----------AGGGDPILYQHLF*FFGHPEVYILILPGFGIISH 402
++L DR + T FF P AGGG P+L+QHLF F+ HP VYI+ILP G++S
Sbjct: 246 MMLADRLIGTGFFLPEGLVVNNSPMAAGGGQPLLWQHLFWFYSHPAVYIMILPAMGMVSD 305
Query: 403 IISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHNSL*V*ILXHEHIXXXXXXXXAVPT 582
I++ +K F FIV HH + A+P+
Sbjct: 306 ILAC-FSRKPIFGYKPMVYSICGIAGLGFIVWGHHMFVSGMNPGLGMTFMVATMMIALPS 364
Query: 583 GIKIFR*LATIHG 621
+K F L T++G
Sbjct: 365 AVKTFNWLGTVYG 377
>UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol
oxidase, subunit 1; n=2; Thermoprotei|Rep:
Heme/copper-type cytochrome/quinol oxidase, subunit 1 -
Cenarchaeum symbiosum
Length = 508
Score = 62.9 bits (146), Expect = 6e-09
Identities = 27/51 (52%), Positives = 37/51 (72%)
Frame = +1
Query: 256 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 408
+LLTDR + FF+PA GGDPI Y HLF F HPEVY+L++P G++ ++
Sbjct: 210 MLLTDRLGVSGFFNPAVGGDPIAYAHLFWFTFHPEVYVLVIPAIGMMYEMV 260
>UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=38;
Bacteria|Rep: Cytochrome c oxidase subunit I type -
Anaeromyxobacter sp. Fw109-5
Length = 555
Score = 62.5 bits (145), Expect = 8e-09
Identities = 36/133 (27%), Positives = 54/133 (40%)
Frame = +1
Query: 229 TTCFSWSY*ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 408
T S ++ + FDPA GGDP+L+QH F F+ HP VYI++LP +IS ++
Sbjct: 218 TPVLGMSLLLVAVEHAFGWGIFDPARGGDPVLFQHFFWFYSHPAVYIMVLPAMAVISEVV 277
Query: 409 SQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHNSL*V*ILXHEHIXXXXXXXXAVPTGI 588
+K F F HH + + + T I
Sbjct: 278 C-AFSRKNIFGYKAVAYSSLGIAFVGFFTWGHHMFTSGQSAFNGGVFGVLSMFVGIFTAI 336
Query: 589 KIFR*LATIHGNS 627
K+F AT++ S
Sbjct: 337 KVFNWTATLYKGS 349
>UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13;
Bacteria|Rep: Cytochrome c oxidase, subunit I - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 607
Score = 61.7 bits (143), Expect = 1e-08
Identities = 27/51 (52%), Positives = 36/51 (70%)
Frame = +1
Query: 256 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 408
+L +R + FF GGDP+L+QHLF FFGHPEVYI+ LP G++S I+
Sbjct: 293 LLELERAFHWPFFAAHLGGDPLLWQHLFWFFGHPEVYIIFLPAAGMVSMIV 343
>UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3;
Rhodobacteraceae|Rep: Cytochrome c, monohaem -
Rhodobacter sphaeroides ATCC 17025
Length = 878
Score = 61.3 bits (142), Expect = 2e-08
Identities = 25/47 (53%), Positives = 33/47 (70%)
Frame = +1
Query: 268 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 408
+R + FFDP GGDP+L+QHLF FGHPEVYI+ LP + + I+
Sbjct: 254 ERGFDWPFFDPERGGDPLLWQHLFWIFGHPEVYIIFLPLIALAAMIV 300
>UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2;
Rhodobacteraceae|Rep: QoxA, Quinol oxidase subunit I -
Roseovarius nubinhibens ISM
Length = 818
Score = 60.5 bits (140), Expect = 3e-08
Identities = 27/51 (52%), Positives = 34/51 (66%)
Frame = +1
Query: 256 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 408
+L +R + FF A GGD +L+QHLF FGHPEVYI+ LP G IS I+
Sbjct: 224 LLELERAFDMPFFQAAAGGDALLWQHLFWLFGHPEVYIIFLPAAGAISTIL 274
>UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4
precursor (DNA endonuclease I- SceII) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI4 (EC 3.1.-.-) (Intron-encoded
endonuclease I-SceII)]; n=4; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI4 precursor (DNA
endonuclease I- SceII) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI4 (EC 3.1.-.-) (Intron-encoded endonuclease I-SceII)]
- Saccharomyces cerevisiae (Baker's yeast)
Length = 556
Score = 60.5 bits (140), Expect = 3e-08
Identities = 35/71 (49%), Positives = 40/71 (56%)
Frame = +2
Query: 2 GTR*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLP 181
GT TVYPPLSS AH G SVDLAIF+LHL ISS + +LP
Sbjct: 124 GTGWTVYPPLSSIQAHSGPSVDLAIFALHLTSISSLLGAINFIVTTLNMRTNGMTMHKLP 183
Query: 182 LFV*AVGITAF 214
LFV ++ ITAF
Sbjct: 184 LFVWSIFITAF 194
Score = 60.1 bits (139), Expect = 4e-08
Identities = 26/41 (63%), Positives = 32/41 (78%)
Frame = +1
Query: 256 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIL 378
+LL DRN NTSFF+ +GGGDPILY+HLF FFG I++L
Sbjct: 209 MLLLDRNFNTSFFEVSGGGDPILYEHLFWFFGQTVATIIML 249
>UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI4
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI4 (EC
3.1.-.-)]; n=3; Basidiomycota|Rep: Probable
intron-encoded endonuclease aI4 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI4 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 530
Score = 60.5 bits (140), Expect = 3e-08
Identities = 36/82 (43%), Positives = 42/82 (51%)
Frame = +2
Query: 2 GTR*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLP 181
GT TVYPPLS +H G SVDLAIFSLHL+GISS + +LP
Sbjct: 123 GTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMTLHKLP 182
Query: 182 LFV*AVGITAFXXXXXXXXXAG 247
LFV A+ +TA AG
Sbjct: 183 LFVWAIFVTAILLLLSLPVLAG 204
>UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15;
Proteobacteria|Rep: Quinol oxidase subunit I -
Rhodobacter sphaeroides (Rhodopseudomonas sphaeroides)
Length = 825
Score = 58.8 bits (136), Expect = 1e-07
Identities = 27/51 (52%), Positives = 33/51 (64%)
Frame = +1
Query: 256 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 408
+L +R FF A GGD +L+QHLF FGHPEVYI+ LP G IS I+
Sbjct: 224 LLELERAFGLPFFQVAEGGDSLLWQHLFWLFGHPEVYIIFLPAAGAISTIL 274
>UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1;
Munidopsis verrucosus|Rep: Cytochrome c oxidase subunit
1 - Munidopsis verrucosus
Length = 154
Score = 58.8 bits (136), Expect = 1e-07
Identities = 33/76 (43%), Positives = 41/76 (53%)
Frame = +2
Query: 26 PLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGI 205
PL+S+IAH G SVD+AIFSLHLAG+SS + D++PLF+ AV I
Sbjct: 72 PLASSIAHAGASVDMAIFSLHLAGVSSILGSVNFMTTVINMRAKGMTLDRVPLFIWAVFI 131
Query: 206 TAFXXXXXXXXXAGAI 253
T AGAI
Sbjct: 132 TTVLLLLSLPVLAGAI 147
>UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa
group|Rep: COX1-i5 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 608
Score = 58.8 bits (136), Expect = 1e-07
Identities = 25/37 (67%), Positives = 30/37 (81%)
Frame = +1
Query: 268 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIL 378
DRN NTSFF+ AGGGD +LYQHLF ++ HPEV I+ L
Sbjct: 218 DRNFNTSFFEYAGGGDAVLYQHLFYWWNHPEVKIICL 254
Score = 49.2 bits (112), Expect = 8e-05
Identities = 29/70 (41%), Positives = 36/70 (51%)
Frame = +2
Query: 2 GTR*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLP 181
GT TVY PL+ +H G +VDLAIFSLHL+G SS ++ +P
Sbjct: 129 GTGWTVYFPLAGIQSHSGPAVDLAIFSLHLSGFSSLLGAINFITTFINMRTIGMKYENVP 188
Query: 182 LFV*AVGITA 211
LF AV TA
Sbjct: 189 LFAWAVLFTA 198
>UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein;
n=1; Saccharomyces castellii|Rep: I-SceII DNA
endonuclease-like protein - Saccharomyces castellii
(Yeast)
Length = 598
Score = 58.8 bits (136), Expect = 1e-07
Identities = 25/32 (78%), Positives = 28/32 (87%)
Frame = +1
Query: 256 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 351
+LL DRN NTSFF+ AGGGDPILY+HLF FFG
Sbjct: 209 MLLLDRNFNTSFFEVAGGGDPILYEHLFWFFG 240
Score = 56.8 bits (131), Expect = 4e-07
Identities = 33/70 (47%), Positives = 39/70 (55%)
Frame = +2
Query: 2 GTR*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLP 181
GT TVYPPL+S AH G SVDLAIF+LH+ ISS + +LP
Sbjct: 124 GTGWTVYPPLASIQAHSGPSVDLAIFALHMTSISSLLGAINFIVTTLNMRTNGMTMHKLP 183
Query: 182 LFV*AVGITA 211
LFV A+ ITA
Sbjct: 184 LFVWAILITA 193
>UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2;
Deinococcus|Rep: Cytochrome c oxidase, subunit I -
Deinococcus radiodurans
Length = 820
Score = 57.6 bits (133), Expect = 2e-07
Identities = 37/115 (32%), Positives = 50/115 (43%)
Frame = +1
Query: 277 LNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXX 456
L S F+P GG P+LYQ F F+ HP VY+++LP GI + + S +K F
Sbjct: 233 LGLSMFNPGIGGVPVLYQQFFWFYSHPAVYVMLLPYLGIGAEVAS-TMARKPLFGYRVMV 291
Query: 457 XXXXXXXXXXFIV*AHHNSL*V*ILXHEHIXXXXXXXXAVPTGIKIFR*LATIHG 621
IV HH + AVPTG+KIF + T+ G
Sbjct: 292 YSMLAIVLVSCIVWLHHMFAVGIPEAWQIAFMISTLIVAVPTGVKIFNLIGTLWG 346
>UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3;
Proteobacteria|Rep: Cytochrome-c oxidase - Nitrosomonas
eutropha (strain C71)
Length = 703
Score = 57.6 bits (133), Expect = 2e-07
Identities = 38/113 (33%), Positives = 50/113 (44%)
Frame = +1
Query: 259 LLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETF 438
L DR L+ FF GG+ + + ++F FGHPEVYILILP FG+ S I S G K F
Sbjct: 273 LALDRYLDFHFFTNGLGGNQMNFLNMFWLFGHPEVYILILPAFGVYSEIFSTFSG-KVLF 331
Query: 439 XXXXXXXXXXXXXXXXFIV*AHHNSL*V*ILXHEHIXXXXXXXXAVPTGIKIF 597
F+V HH + +PTG+KI+
Sbjct: 332 GYKSLVWATISIAFLSFLVWLHHFFTMGQSGHINAVFGIASMLIGIPTGVKIY 384
>UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium
cryptum JF-5|Rep: Cytochrome-c oxidase - Acidiphilium
cryptum (strain JF-5)
Length = 689
Score = 57.6 bits (133), Expect = 2e-07
Identities = 27/51 (52%), Positives = 34/51 (66%)
Frame = +1
Query: 256 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 408
+L DR L T FF GG+ +LY +LF +GHPEVY ++LP FG IS II
Sbjct: 271 MLGADRYLGTHFFTAGLGGNLMLYTNLFWIWGHPEVYFVVLPAFGFISEII 321
>UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=1;
Beggiatoa sp. PS|Rep: Cytochrome c oxidase aa3, subunit
1 - Beggiatoa sp. PS
Length = 525
Score = 56.0 bits (129), Expect = 7e-07
Identities = 22/52 (42%), Positives = 34/52 (65%)
Frame = +1
Query: 256 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 411
+L D+ + T FFD A GGD + YQ+LF F+ HP VY++ LP ++ I++
Sbjct: 208 MLTFDKYIGTHFFDAAAGGDALTYQNLFWFYSHPAVYVIFLPFMAMVFEIVA 259
>UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|Rep:
Cox-i3 protein - Candida stellata (Yeast)
Length = 588
Score = 56.0 bits (129), Expect = 7e-07
Identities = 25/43 (58%), Positives = 33/43 (76%), Gaps = 2/43 (4%)
Frame = +1
Query: 256 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH--PEVYILIL 378
+LL DRN NTSFF +GGGDP+LY+H+F FFG P + I+I+
Sbjct: 226 MLLMDRNFNTSFFVVSGGGDPLLYEHIFWFFGQIWPIIIIIII 268
Score = 55.2 bits (127), Expect = 1e-06
Identities = 29/70 (41%), Positives = 41/70 (58%)
Frame = +2
Query: 2 GTR*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLP 181
G+ T+YPPL+S +H G S+D+AIF+LHL+G+SS + +LP
Sbjct: 141 GSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGMDYSKLP 200
Query: 182 LFV*AVGITA 211
LFV +V ITA
Sbjct: 201 LFVWSVLITA 210
>UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|Rep:
Cox-i2 protein - Candida stellata (Yeast)
Length = 586
Score = 55.2 bits (127), Expect = 1e-06
Identities = 29/70 (41%), Positives = 41/70 (58%)
Frame = +2
Query: 2 GTR*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLP 181
G+ T+YPPL+S +H G S+D+AIF+LHL+G+SS + +LP
Sbjct: 141 GSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGMDYSKLP 200
Query: 182 LFV*AVGITA 211
LFV +V ITA
Sbjct: 201 LFVWSVLITA 210
Score = 48.8 bits (111), Expect = 1e-04
Identities = 26/46 (56%), Positives = 33/46 (71%)
Frame = +1
Query: 256 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGI 393
+LL DRN NTSFF +GGGDP+LY+H+ F+ +P V ILI GI
Sbjct: 226 MLLMDRNFNTSFFVVSGGGDPLLYEHI--FYKNP-VLILIWLTSGI 268
>UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1;
Planctomyces maris DSM 8797|Rep: Cytochrome c oxidase
subunit I - Planctomyces maris DSM 8797
Length = 606
Score = 54.0 bits (124), Expect = 3e-06
Identities = 27/68 (39%), Positives = 37/68 (54%)
Frame = +1
Query: 304 GGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXX 483
GGG P+L+QHLF F+ HP VYI++LP G++S ++S +K F
Sbjct: 276 GGGQPLLWQHLFWFYSHPAVYIMLLPIMGMVSDMLSC-MCRKPLFGYKPMVFSMSAIASL 334
Query: 484 XFIV*AHH 507
FIV HH
Sbjct: 335 GFIVWGHH 342
>UniRef50_Q9TCV5 Cluster: Cytochrome c oxidase subunit I; n=6;
Digenea|Rep: Cytochrome c oxidase subunit I -
Echinostoma hortense
Length = 154
Score = 52.8 bits (121), Expect = 7e-06
Identities = 32/95 (33%), Positives = 40/95 (42%)
Frame = +1
Query: 343 FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHNSL*V 522
FFGHPEVY+LILP FGI+SHI F +V AHH +
Sbjct: 1 FFGHPEVYVLILPVFGIVSHICMTFTNNDSLFGYYGLVLAMLAIVCLGSVVWAHHMFMVG 60
Query: 523 *ILXHEHIXXXXXXXXAVPTGIKIFR*LATIHGNS 627
+ +PTGIK+F L + G S
Sbjct: 61 YDVHTAVFFSSVTMVIGIPTGIKVFSWLIMLGGGS 95
>UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1;
Myrmarachne sp. G FSC-2006|Rep: Cytochrome c oxidase
subunit I - Myrmarachne sp. G FSC-2006
Length = 129
Score = 50.4 bits (115), Expect = 4e-05
Identities = 23/31 (74%), Positives = 25/31 (80%)
Frame = +2
Query: 14 TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 106
TVYPPL+S + H G SVD AIFSLHLAG SS
Sbjct: 22 TVYPPLASVVGHGGSSVDFAIFSLHLAGASS 52
>UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1;
Aplidium nordmanni|Rep: Cytochrome c oxidase subunit I -
Aplidium nordmanni
Length = 227
Score = 46.4 bits (105), Expect = 6e-04
Identities = 21/30 (70%), Positives = 23/30 (76%)
Frame = +2
Query: 17 VYPPLSSNIAHRGRSVDLAIFSLHLAGISS 106
VYPP SS +AH +VDL IF LHLAGISS
Sbjct: 118 VYPPXSSGLAHSSGAVDLGIFXLHLAGISS 147
>UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;
n=2; Thermoplasmatales|Rep: Cytochrome c oxidase
polypeptide I/III - Picrophilus torridus
Length = 841
Score = 45.2 bits (102), Expect = 0.001
Identities = 20/52 (38%), Positives = 35/52 (67%)
Frame = +1
Query: 256 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 411
+LL ++ S++ GG +++++LF +FGHPEVY+L+LPG G + +S
Sbjct: 238 LLLVGNLMHASYYISNYGG-ALMWENLFWYFGHPEVYLLLLPGTGAMFDYLS 288
>UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3;
Halobacteriaceae|Rep: Cytochrome c oxidase subunit I -
Haloarcula marismortui (Halobacterium marismortui)
Length = 854
Score = 44.8 bits (101), Expect = 0.002
Identities = 18/45 (40%), Positives = 26/45 (57%)
Frame = +1
Query: 295 DPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKK 429
D G +L+ HLF FFGHPEVYI+ P G+++ G++
Sbjct: 243 DADNPGASLLWAHLFWFFGHPEVYIVFFPALGVMAECFQTFTGRR 287
>UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1;
Tetragona dorsalis ziegleri|Rep: Cytochrome c oxidase
subunit I - Tetragona dorsalis ziegleri
Length = 111
Score = 44.4 bits (100), Expect = 0.002
Identities = 21/41 (51%), Positives = 27/41 (65%)
Frame = +1
Query: 256 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIL 378
+LL+DRN N FF GG PIL+Q++ FGH +V LIL
Sbjct: 41 MLLSDRNFNKFFFILIGGEYPILHQYMLWLFGHTDVLFLIL 81
>UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Aedes
cretinus|Rep: Cytochrome c oxidase subunit I - Aedes
cretinus
Length = 153
Score = 42.3 bits (95), Expect = 0.010
Identities = 20/27 (74%), Positives = 21/27 (77%)
Frame = +2
Query: 2 GTR*TVYPPLSSNIAHRGRSVDLAIFS 82
GT TVYPPLSS AH G SVDLAI+S
Sbjct: 39 GTGWTVYPPLSSGTAHAGASVDLAIYS 65
Score = 39.9 bits (89), Expect = 0.051
Identities = 19/32 (59%), Positives = 20/32 (62%)
Frame = +3
Query: 258 IINRSKLKYIIF*SCWRRRPNFISTFILIFWT 353
IIN K KY IF W P +STFILIFWT
Sbjct: 121 IINWPKSKYFIFWPNWSSSPYSLSTFILIFWT 152
>UniRef50_Q9MFX8 Cluster: Cytochrome oxidase I; n=5; Echinometra
lucunter|Rep: Cytochrome oxidase I - Echinometra
lucunter
Length = 199
Score = 41.9 bits (94), Expect = 0.013
Identities = 22/57 (38%), Positives = 28/57 (49%)
Frame = +3
Query: 330 TFILIFWTS*SLYFNFTRIWYNFSYYFTRKRKKRNFWLFRNNLCYTSNWVIRIHCLS 500
T ILI W S+Y F IW +F+ T FW+ N L + SNW I C+S
Sbjct: 1 TPILILWPPSSIYSYFAGIWNDFARNRTLFSNASTFWVPGNGLRHDSNWSPSIPCMS 57
>UniRef50_Q9B9T9 Cluster: Cytochrome oxidase subunit 1; n=7;
Locustacarus buchneri|Rep: Cytochrome oxidase subunit 1
- Locustacarus buchneri
Length = 185
Score = 37.1 bits (82), Expect = 0.36
Identities = 24/74 (32%), Positives = 35/74 (47%)
Frame = +3
Query: 255 NIINRSKLKYIIF*SCWRRRPNFISTFILIFWTS*SLYFNFTRIWYNFSYYFTRKRKKRN 434
N N SKL++I+ S PN I ILI T L+ N T I ++ +K N
Sbjct: 112 NTTNSSKLQHILLRSFGGSGPNPIPASILILRTPSGLHSNSTSIRNRITHLHNIFSQKSN 171
Query: 435 FWLFRNNLCYTSNW 476
++NNL ++ W
Sbjct: 172 ILYYKNNLRHSIYW 185
>UniRef50_O86945 Cluster: Sub-unit I of an aa3-type cytochrome
oxidase; n=1; Acidithiobacillus ferrooxidans|Rep:
Sub-unit I of an aa3-type cytochrome oxidase -
Thiobacillus ferrooxidans (Acidithiobacillus
ferrooxidans)
Length = 627
Score = 36.7 bits (81), Expect = 0.48
Identities = 18/41 (43%), Positives = 21/41 (51%)
Frame = +1
Query: 286 SFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 408
S F G P+ Y F F HPEVY+ ILP F I I+
Sbjct: 311 SHFYTGPTGHPLAYLDQFWFLFHPEVYVFILPAFAIWLEIL 351
>UniRef50_A5URU0 Cluster: Cytochrome c oxidase, subunit I; n=4;
Chloroflexaceae|Rep: Cytochrome c oxidase, subunit I -
Roseiflexus sp. RS-1
Length = 561
Score = 35.5 bits (78), Expect = 1.1
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +1
Query: 307 GGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERG 423
G DP+L + LF F GHP VY +LP + + + Q+ G
Sbjct: 224 GTDPVLARTLFWFTGHPIVYFWLLPAYISWYNFVPQQAG 262
>UniRef50_Q2Y5N3 Cluster: Integral membrane proteins containing
uncharacterized repeats-like precursor; n=3;
Nitrosospira multiformis ATCC 25196|Rep: Integral
membrane proteins containing uncharacterized
repeats-like precursor - Nitrosospira multiformis
(strain ATCC 25196 / NCIMB 11849)
Length = 433
Score = 34.7 bits (76), Expect = 1.9
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +1
Query: 355 PEVYILILPGFGIISHIISQERGKK 429
PE+Y LILPG G++ I Q++ KK
Sbjct: 407 PEIYALILPGLGLVGFIARQKKAKK 431
>UniRef50_O67937 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 592
Score = 34.7 bits (76), Expect = 1.9
Identities = 18/41 (43%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Frame = +1
Query: 313 DPILYQHLF*FFGHPEVYILILPGFGIISHI---ISQERGK 426
+P+L + LF FFGHP VY +LP + + I I E+GK
Sbjct: 209 NPLLARTLFWFFGHPVVYFWLLPAYVALYTILPKIVSEKGK 249
>UniRef50_P98004 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Cytochrome aa3 subunit
1) (Oxidase aa(3) subunit 1); n=5; Sulfolobaceae|Rep:
Quinol oxidase subunit 1 (EC 1.10.3.-) (Quinol oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Oxidase aa(3)
subunit 1) - Sulfolobus acidocaldarius
Length = 517
Score = 33.9 bits (74), Expect = 3.4
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +1
Query: 319 ILYQHLF*FFGHPEVYILILPGFGIISHIISQERGK 426
+L+ LF F+GHP VY + P FG + + I Q G+
Sbjct: 224 LLWAILFWFYGHPVVYYVPFPLFGALYYYIPQYAGR 259
>UniRef50_Q48874 Cluster: SakB; n=2; Lactobacillus sakei|Rep: SakB -
Lactobacillus sakei
Length = 430
Score = 33.1 bits (72), Expect = 5.9
Identities = 22/67 (32%), Positives = 35/67 (52%)
Frame = +3
Query: 306 RRRPNFISTFILIFWTS*SLYFNFTRIWYNFSYYFTRKRKKRNFWLFRNNLCYTSNWVIR 485
RRR FI+ F I + +LY + + + S YF K KK N +L N+L + + +
Sbjct: 35 RRRVLFIAVFFPITFLV-ALYSDISNVIPILSGYFILKEKKENDYLLLNDLLFCTFIIFG 93
Query: 486 IHCLSSS 506
+ LSS+
Sbjct: 94 CNVLSSN 100
>UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1;
Watasenia scintillans|Rep: Cytochrome c oxidase subunit
I - Watasenia scintillans (Sparkling enope)
Length = 217
Score = 33.1 bits (72), Expect = 5.9
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +2
Query: 53 GRSVDLAIFSLHLAGISS 106
G SVDLAIF LHLAG+SS
Sbjct: 122 GPSVDLAIFPLHLAGVSS 139
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 463,374,448
Number of Sequences: 1657284
Number of extensions: 7465456
Number of successful extensions: 15121
Number of sequences better than 10.0: 103
Number of HSP's better than 10.0 without gapping: 14339
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15013
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 48126133708
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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