Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060749.seq
(661 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF265297-1|AAG17640.1| 125|Tribolium castaneum putative cytochr... 23 2.2
AY884061-1|AAX84202.1| 717|Tribolium castaneum laccase 2A protein. 23 2.9
X06905-1|CAA30009.1| 489|Tribolium castaneum protein ( Triboliu... 22 3.9
U04271-2|AAA03709.1| 490|Tribolium castaneum alpha-amylase II p... 22 3.9
U04271-1|AAA03708.1| 490|Tribolium castaneum alpha-amylase I pr... 22 3.9
EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 22 3.9
EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetyl... 22 3.9
EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 22 3.9
EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 22 3.9
EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetyl... 22 3.9
>AF265297-1|AAG17640.1| 125|Tribolium castaneum putative cytochrome
P450 monooxigenase protein.
Length = 125
Score = 23.0 bits (47), Expect = 2.2
Identities = 9/30 (30%), Positives = 16/30 (53%)
Frame = +1
Query: 565 DLMSFSLHKIKCSXXTXIIVYFKIHNSY*Y 654
D++++S HK+K + +Y HN Y
Sbjct: 71 DIVTYSGHKLKAGSMVHLHIYDMHHNPQVY 100
>AY884061-1|AAX84202.1| 717|Tribolium castaneum laccase 2A protein.
Length = 717
Score = 22.6 bits (46), Expect = 2.9
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = -2
Query: 228 NVKTDKRNRLSNETLNGLLHRKFPTLPANNCSILEPNS 115
NVK + GLLHR+F PA + +I PN+
Sbjct: 616 NVKKINLKHALDLDRQGLLHRQFNLPPAKD-TIAVPNN 652
>X06905-1|CAA30009.1| 489|Tribolium castaneum protein ( Tribolium
castaneum mRNAfor alhpa amylase 3'region. ).
Length = 489
Score = 22.2 bits (45), Expect = 3.9
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +2
Query: 59 IFKEVDALLLYSFAAHNLTLFGSKIEQLFAGKVGN 163
IF+EV L + + H T FG+ IE + +GN
Sbjct: 237 IFQEVIDLGGEAISKHEYTGFGTVIEFQYGLSLGN 271
>U04271-2|AAA03709.1| 490|Tribolium castaneum alpha-amylase II
protein.
Length = 490
Score = 22.2 bits (45), Expect = 3.9
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +2
Query: 59 IFKEVDALLLYSFAAHNLTLFGSKIEQLFAGKVGN 163
IF+EV L + + H T FG+ IE + +GN
Sbjct: 238 IFQEVIDLGGEAISKHEYTGFGTVIEFQYGLSLGN 272
>U04271-1|AAA03708.1| 490|Tribolium castaneum alpha-amylase I
protein.
Length = 490
Score = 22.2 bits (45), Expect = 3.9
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +2
Query: 59 IFKEVDALLLYSFAAHNLTLFGSKIEQLFAGKVGN 163
IF+EV L + + H T FG+ IE + +GN
Sbjct: 238 IFQEVIDLGGEAISKHEYTGFGTVIEFQYGLSLGN 272
>EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
5 protein.
Length = 311
Score = 22.2 bits (45), Expect = 3.9
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -1
Query: 430 ISIIRRTFIYLFSLMSPELTCIVI 359
I I RRT Y F+L+ P C++I
Sbjct: 205 IKIRRRTLYYFFNLIVP---CVLI 225
>EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
4 protein.
Length = 311
Score = 22.2 bits (45), Expect = 3.9
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -1
Query: 430 ISIIRRTFIYLFSLMSPELTCIVI 359
I I RRT Y F+L+ P C++I
Sbjct: 205 IKIRRRTLYYFFNLIVP---CVLI 225
>EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
3 protein.
Length = 311
Score = 22.2 bits (45), Expect = 3.9
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -1
Query: 430 ISIIRRTFIYLFSLMSPELTCIVI 359
I I RRT Y F+L+ P C++I
Sbjct: 205 IKIRRRTLYYFFNLIVP---CVLI 225
>EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
2 protein.
Length = 311
Score = 22.2 bits (45), Expect = 3.9
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -1
Query: 430 ISIIRRTFIYLFSLMSPELTCIVI 359
I I RRT Y F+L+ P C++I
Sbjct: 205 IKIRRRTLYYFFNLIVP---CVLI 225
>EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
1 protein.
Length = 311
Score = 22.2 bits (45), Expect = 3.9
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -1
Query: 430 ISIIRRTFIYLFSLMSPELTCIVI 359
I I RRT Y F+L+ P C++I
Sbjct: 205 IKIRRRTLYYFFNLIVP---CVLI 225
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,952
Number of Sequences: 336
Number of extensions: 3323
Number of successful extensions: 20
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17073220
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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