Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060744.seq
         (661 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcript...    26   1.2  
AJ459960-1|CAD31059.1|  696|Anopheles gambiae prophenoloxidase 7...    24   3.7  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         24   4.9  
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    23   6.5  

>AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcriptase
           protein.
          Length = 988

 Score = 25.8 bits (54), Expect = 1.2
 Identities = 13/28 (46%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
 Frame = -1

Query: 538 AIGLLPPNLRGHR-QFLRQIVNFGNNII 458
           A+  L PN RG + +  RQ++N GN+II
Sbjct: 756 ALTCLMPNKRGPKSRSRRQLINVGNSII 783


>AJ459960-1|CAD31059.1|  696|Anopheles gambiae prophenoloxidase 7
           protein.
          Length = 696

 Score = 24.2 bits (50), Expect = 3.7
 Identities = 17/55 (30%), Positives = 23/55 (41%), Gaps = 1/55 (1%)
 Frame = -3

Query: 593 RAVSASRRATI-ISLANKMSDRFASAKSAWPPSIFASDRQFWQ*HHLYPFQRPAR 432
           RAV    R +I I L    SDR    + A+       +   W  H +YP + P R
Sbjct: 182 RAVLQPNRMSIDIPLNYTASDRVTEQRLAYFREDIGVNLHHWHWHLVYPAEGPER 236


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 23.8 bits (49), Expect = 4.9
 Identities = 11/37 (29%), Positives = 20/37 (54%), Gaps = 4/37 (10%)
 Frame = -2

Query: 300 VQIQRVALL----CHAIWSRCWIWSACSNVDLYLPST 202
           V++Q ++LL    CH  + R  +W  C+ +    PS+
Sbjct: 142 VRVQDISLLIVDECHKNYGRQELWEICARLTHQAPSS 178


>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1222

 Score = 23.4 bits (48), Expect = 6.5
 Identities = 12/42 (28%), Positives = 20/42 (47%)
 Frame = +1

Query: 526 ANRSLILFANEMIVARRDAETARQDCXNARRETAQWXNRMAD 651
           +N   I FA   ++ R  A++ RQ+  + R    +W  R  D
Sbjct: 201 SNHVYIRFAVGELLQRPAADSRRQEGPSTRESGTRWRTRHFD 242


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 727,187
Number of Sequences: 2352
Number of extensions: 15825
Number of successful extensions: 28
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 65650335
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)