Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060743.seq
         (495 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          21   4.6  
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           21   4.6  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    21   8.1  

>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 21.4 bits (43), Expect = 4.6
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = +3

Query: 198 FEKYLKEHVKVEGKTNNLSITLSSPGIRRKSLSPQT 305
           F+    +H K +   N +S   SSP     SLSPQ+
Sbjct: 136 FQNRRMKHKKEQ--MNKVSTPRSSPAETASSLSPQS 169


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 21.4 bits (43), Expect = 4.6
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = +3

Query: 198 FEKYLKEHVKVEGKTNNLSITLSSPGIRRKSLSPQT 305
           F+    +H K +   N +S   SSP     SLSPQ+
Sbjct: 127 FQNRRMKHKKEQ--MNKVSTPRSSPAETASSLSPQS 160


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 6/21 (28%), Positives = 14/21 (66%)
 Frame = +1

Query: 292 YHRRHSFFKEVPEVFNKTLPQ 354
           ++R HS+  ++ + +  TLP+
Sbjct: 399 FYRWHSYIDDIFQEYKATLPR 419


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,334
Number of Sequences: 336
Number of extensions: 1630
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11630247
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)