Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060741.seq
         (686 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger transc...    23   6.8  
AF042732-3|AAC18058.1|  496|Anopheles gambiae diphenol oxidase-A...    23   6.8  
AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform ...    23   9.0  

>AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger
           transcription factor pannier protein.
          Length = 537

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = +2

Query: 422 STAHAVFSVT*DEPAVIFTTQSLQRRRTQHAESKIN 529
           S+AH   +      + I+TT S     TQH+ S +N
Sbjct: 342 SSAHQQHTTAGLNSSHIYTTPSSNSLSTQHSHSPVN 377


>AF042732-3|AAC18058.1|  496|Anopheles gambiae diphenol oxidase-A2
           protein.
          Length = 496

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +1

Query: 136 SEVYSTSEPPPAYRHRVS 189
           +++YST EP  A+  R+S
Sbjct: 427 TDIYSTREPQLAFHQRIS 444


>AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform B
           protein.
          Length = 755

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 9/29 (31%), Positives = 14/29 (48%)
 Frame = -2

Query: 685 PTHQVKLNRQFEHRSNRFKFVVLFSRTVG 599
           P H V++N        R+ FV+   + VG
Sbjct: 418 PVHPVQVNTIISFSGERYDFVITADQPVG 446


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 699,883
Number of Sequences: 2352
Number of extensions: 14195
Number of successful extensions: 26
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 69413730
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)