Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060741.seq
         (686 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC133012-1|AAI33013.1|  135|Homo sapiens FLJ40142 protein protein.     32   1.7  
BC133010-1|AAI33011.1|  135|Homo sapiens FLJ40142 protein protein.     32   1.7  
AK097461-1|BAC05063.1|  135|Homo sapiens protein ( Homo sapiens ...    32   1.7  
AK097411-1|BAC05040.1|  656|Homo sapiens protein ( Homo sapiens ...    31   2.9  

>BC133012-1|AAI33013.1|  135|Homo sapiens FLJ40142 protein protein.
          Length = 135

 Score = 32.3 bits (70), Expect = 1.7
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = +1

Query: 406 PTLCMEYRPCCLQCYLRRASRHLHDPVSSKTTHSTCR 516
           P  C++   CCL C L +ASR +H  V S     +C+
Sbjct: 31  PDGCVQSWRCCLPCDLGQASRFIHTTVCSAIRWRSCK 67


>BC133010-1|AAI33011.1|  135|Homo sapiens FLJ40142 protein protein.
          Length = 135

 Score = 32.3 bits (70), Expect = 1.7
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = +1

Query: 406 PTLCMEYRPCCLQCYLRRASRHLHDPVSSKTTHSTCR 516
           P  C++   CCL C L +ASR +H  V S     +C+
Sbjct: 31  PDGCVQSWRCCLPCDLGQASRFIHTTVCSAIRWRSCK 67


>AK097461-1|BAC05063.1|  135|Homo sapiens protein ( Homo sapiens
           cDNA FLJ40142 fis, clone TESTI2012922. ).
          Length = 135

 Score = 32.3 bits (70), Expect = 1.7
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = +1

Query: 406 PTLCMEYRPCCLQCYLRRASRHLHDPVSSKTTHSTCR 516
           P  C++   CCL C L +ASR +H  V S     +C+
Sbjct: 31  PDGCVQSWRCCLPCDLGQASRFIHTTVCSAIRWRSCK 67


>AK097411-1|BAC05040.1|  656|Homo sapiens protein ( Homo sapiens
           cDNA FLJ40092 fis, clone TESTI2003756. ).
          Length = 656

 Score = 31.5 bits (68), Expect = 2.9
 Identities = 14/48 (29%), Positives = 25/48 (52%)
 Frame = +1

Query: 97  SMATITMKPEYPPSEVYSTSEPPPAYRHRVSTSVQIAKIAALTVVASS 240
           S A ++ K   PP  ++S+S+P PA  +    + Q+  +   T  A+S
Sbjct: 28  STAPVSGKKHRPPGPLFSSSDPLPATSYHSRDTAQVTSLIPATFTAAS 75



 Score = 31.5 bits (68), Expect = 2.9
 Identities = 15/48 (31%), Positives = 24/48 (50%)
 Frame = +1

Query: 97  SMATITMKPEYPPSEVYSTSEPPPAYRHRVSTSVQIAKIAALTVVASS 240
           S A ++ K   PP  ++S+S+P PA       S Q+  +   T  A+S
Sbjct: 299 STAPVSGKKHRPPGPLFSSSDPLPATSSHSRDSAQVTSLIPATFTAAS 346


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,927,827
Number of Sequences: 237096
Number of extensions: 2158990
Number of successful extensions: 5870
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5399
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5869
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7839245960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)