Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060741.seq
(686 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
S81027-1|AAB36035.1| 608|Drosophila melanogaster Msr-110 protein. 71 2e-12
AY118587-1|AAM49956.1| 608|Drosophila melanogaster LD44960p pro... 71 2e-12
AE014296-970|AAN12100.1| 608|Drosophila melanogaster CG10596-PB... 71 2e-12
BT001836-1|AAN71591.1| 617|Drosophila melanogaster RH50422p pro... 60 3e-09
AE014296-971|AAF50768.1| 617|Drosophila melanogaster CG10596-PA... 60 3e-09
AE014296-972|AAN12101.1| 625|Drosophila melanogaster CG10596-PC... 48 1e-05
AY875639-1|AAX59985.1| 1854|Drosophila melanogaster Dp205 protein. 32 0.85
AE014297-2674|ABI31177.1| 1854|Drosophila melanogaster CG34157-P... 32 0.85
AF051933-1|AAC73052.1| 1097|Drosophila melanogaster cyclin T pro... 31 2.0
AE014296-2932|AAS64974.1| 884|Drosophila melanogaster CG6292-PA... 31 2.0
AE014296-2931|AAF49325.1| 1097|Drosophila melanogaster CG6292-PB... 31 2.0
AE014134-3167|AAF53849.1| 538|Drosophila melanogaster CG13958-P... 29 7.9
>S81027-1|AAB36035.1| 608|Drosophila melanogaster Msr-110 protein.
Length = 608
Score = 70.5 bits (165), Expect = 2e-12
Identities = 35/54 (64%), Positives = 44/54 (81%), Gaps = 1/54 (1%)
Frame = +1
Query: 97 SMATITMKPEYPPSEVYST-SEPPPAYRHRVSTSVQIAKIAALTVVASSFILGT 255
SMAT+ MKP+Y SEVYST SEPPPAY+ R + SV+IAKI A T++ S+FILG+
Sbjct: 8 SMATVQMKPDYAASEVYSTASEPPPAYK-RQANSVKIAKITAFTIIVSAFILGS 60
Score = 48.0 bits (109), Expect = 1e-05
Identities = 24/49 (48%), Positives = 34/49 (69%)
Frame = +3
Query: 246 LGNFILASSWVAARSSCHQLEQLDAMLDKELALEGRAYGNDALVADEPL 392
LG+FILASS++ A++SC Q++ LD++L+KEL LE L EPL
Sbjct: 58 LGSFILASSYLQAKASCDQVQALDSVLEKELMLETLQQVGKELPRAEPL 106
>AY118587-1|AAM49956.1| 608|Drosophila melanogaster LD44960p
protein.
Length = 608
Score = 70.5 bits (165), Expect = 2e-12
Identities = 35/54 (64%), Positives = 44/54 (81%), Gaps = 1/54 (1%)
Frame = +1
Query: 97 SMATITMKPEYPPSEVYST-SEPPPAYRHRVSTSVQIAKIAALTVVASSFILGT 255
SMAT+ MKP+Y SEVYST SEPPPAY+ R + SV+IAKI A T++ S+FILG+
Sbjct: 8 SMATVQMKPDYAASEVYSTASEPPPAYK-RQANSVKIAKITAFTIIVSAFILGS 60
Score = 48.0 bits (109), Expect = 1e-05
Identities = 24/49 (48%), Positives = 34/49 (69%)
Frame = +3
Query: 246 LGNFILASSWVAARSSCHQLEQLDAMLDKELALEGRAYGNDALVADEPL 392
LG+FILASS++ A++SC Q++ LD++L+KEL LE L EPL
Sbjct: 58 LGSFILASSYLQAKASCDQVQALDSVLEKELMLETLQQVGKELPRAEPL 106
>AE014296-970|AAN12100.1| 608|Drosophila melanogaster CG10596-PB,
isoform B protein.
Length = 608
Score = 70.5 bits (165), Expect = 2e-12
Identities = 35/54 (64%), Positives = 44/54 (81%), Gaps = 1/54 (1%)
Frame = +1
Query: 97 SMATITMKPEYPPSEVYST-SEPPPAYRHRVSTSVQIAKIAALTVVASSFILGT 255
SMAT+ MKP+Y SEVYST SEPPPAY+ R + SV+IAKI A T++ S+FILG+
Sbjct: 8 SMATVQMKPDYAASEVYSTASEPPPAYK-RQANSVKIAKITAFTIIVSAFILGS 60
Score = 48.0 bits (109), Expect = 1e-05
Identities = 24/49 (48%), Positives = 34/49 (69%)
Frame = +3
Query: 246 LGNFILASSWVAARSSCHQLEQLDAMLDKELALEGRAYGNDALVADEPL 392
LG+FILASS++ A++SC Q++ LD++L+KEL LE L EPL
Sbjct: 58 LGSFILASSYLQAKASCDQVQALDSVLEKELMLETLQQVGKELPRAEPL 106
>BT001836-1|AAN71591.1| 617|Drosophila melanogaster RH50422p
protein.
Length = 617
Score = 60.1 bits (139), Expect = 3e-09
Identities = 34/62 (54%), Positives = 43/62 (69%), Gaps = 9/62 (14%)
Frame = +1
Query: 97 SMATITMKPEYPPSEVYST-SEPPPA----YRH----RVSTSVQIAKIAALTVVASSFIL 249
SMAT+ MKP+Y SEVYST SEPPP + H R + SV+IAKI A T++ S+FIL
Sbjct: 8 SMATVQMKPDYAASEVYSTASEPPPMGFFNFNHQAYKRQANSVKIAKITAFTIIVSAFIL 67
Query: 250 GT 255
G+
Sbjct: 68 GS 69
Score = 48.0 bits (109), Expect = 1e-05
Identities = 24/49 (48%), Positives = 34/49 (69%)
Frame = +3
Query: 246 LGNFILASSWVAARSSCHQLEQLDAMLDKELALEGRAYGNDALVADEPL 392
LG+FILASS++ A++SC Q++ LD++L+KEL LE L EPL
Sbjct: 67 LGSFILASSYLQAKASCDQVQALDSVLEKELMLETLQQVGKELPRAEPL 115
>AE014296-971|AAF50768.1| 617|Drosophila melanogaster CG10596-PA,
isoform A protein.
Length = 617
Score = 60.1 bits (139), Expect = 3e-09
Identities = 34/62 (54%), Positives = 43/62 (69%), Gaps = 9/62 (14%)
Frame = +1
Query: 97 SMATITMKPEYPPSEVYST-SEPPPA----YRH----RVSTSVQIAKIAALTVVASSFIL 249
SMAT+ MKP+Y SEVYST SEPPP + H R + SV+IAKI A T++ S+FIL
Sbjct: 8 SMATVQMKPDYAASEVYSTASEPPPMGFFNFNHQAYKRQANSVKIAKITAFTIIVSAFIL 67
Query: 250 GT 255
G+
Sbjct: 68 GS 69
Score = 48.0 bits (109), Expect = 1e-05
Identities = 24/49 (48%), Positives = 34/49 (69%)
Frame = +3
Query: 246 LGNFILASSWVAARSSCHQLEQLDAMLDKELALEGRAYGNDALVADEPL 392
LG+FILASS++ A++SC Q++ LD++L+KEL LE L EPL
Sbjct: 67 LGSFILASSYLQAKASCDQVQALDSVLEKELMLETLQQVGKELPRAEPL 115
>AE014296-972|AAN12101.1| 625|Drosophila melanogaster CG10596-PC,
isoform C protein.
Length = 625
Score = 48.0 bits (109), Expect = 1e-05
Identities = 24/49 (48%), Positives = 34/49 (69%)
Frame = +3
Query: 246 LGNFILASSWVAARSSCHQLEQLDAMLDKELALEGRAYGNDALVADEPL 392
LG+FILASS++ A++SC Q++ LD++L+KEL LE L EPL
Sbjct: 75 LGSFILASSYLQAKASCDQVQALDSVLEKELMLETLQQVGKELPRAEPL 123
Score = 33.5 bits (73), Expect = 0.28
Identities = 16/29 (55%), Positives = 23/29 (79%)
Frame = +1
Query: 169 AYRHRVSTSVQIAKIAALTVVASSFILGT 255
AY+ R + SV+IAKI A T++ S+FILG+
Sbjct: 50 AYK-RQANSVKIAKITAFTIIVSAFILGS 77
>AY875639-1|AAX59985.1| 1854|Drosophila melanogaster Dp205 protein.
Length = 1854
Score = 31.9 bits (69), Expect = 0.85
Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Frame = +3
Query: 420 GVPPMLSSVLPETSQPSSSRPSLFK--DDALNMPSP 521
G PP L+S+LP + P +++P K + LN PSP
Sbjct: 98 GPPPQLTSMLPSSGLPGAAQPIALKGNNPFLNSPSP 133
>AE014297-2674|ABI31177.1| 1854|Drosophila melanogaster CG34157-PD,
isoform D protein.
Length = 1854
Score = 31.9 bits (69), Expect = 0.85
Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Frame = +3
Query: 420 GVPPMLSSVLPETSQPSSSRPSLFK--DDALNMPSP 521
G PP L+S+LP + P +++P K + LN PSP
Sbjct: 98 GPPPQLTSMLPSSGLPGAAQPIALKGNNPFLNSPSP 133
>AF051933-1|AAC73052.1| 1097|Drosophila melanogaster cyclin T
protein.
Length = 1097
Score = 30.7 bits (66), Expect = 2.0
Identities = 17/44 (38%), Positives = 26/44 (59%)
Frame = +3
Query: 393 PLANAHALHGVPPMLSSVLPETSQPSSSRPSLFKDDALNMPSPK 524
PL ++ + P ++ S+L E+ PS++ SL K DAL MP K
Sbjct: 775 PLNMSNGIETTPDLVRSLLKESLCPSNA--SLLKPDALTMPGLK 816
>AE014296-2932|AAS64974.1| 884|Drosophila melanogaster CG6292-PA,
isoform A protein.
Length = 884
Score = 30.7 bits (66), Expect = 2.0
Identities = 17/44 (38%), Positives = 26/44 (59%)
Frame = +3
Query: 393 PLANAHALHGVPPMLSSVLPETSQPSSSRPSLFKDDALNMPSPK 524
PL ++ + P ++ S+L E+ PS++ SL K DAL MP K
Sbjct: 562 PLNMSNGIETTPDLVRSLLKESLCPSNA--SLLKPDALTMPGLK 603
>AE014296-2931|AAF49325.1| 1097|Drosophila melanogaster CG6292-PB,
isoform B protein.
Length = 1097
Score = 30.7 bits (66), Expect = 2.0
Identities = 17/44 (38%), Positives = 26/44 (59%)
Frame = +3
Query: 393 PLANAHALHGVPPMLSSVLPETSQPSSSRPSLFKDDALNMPSPK 524
PL ++ + P ++ S+L E+ PS++ SL K DAL MP K
Sbjct: 775 PLNMSNGIETTPDLVRSLLKESLCPSNA--SLLKPDALTMPGLK 816
>AE014134-3167|AAF53849.1| 538|Drosophila melanogaster CG13958-PA
protein.
Length = 538
Score = 28.7 bits (61), Expect = 7.9
Identities = 18/43 (41%), Positives = 20/43 (46%)
Frame = +3
Query: 390 LPLANAHALHGVPPMLSSVLPETSQPSSSRPSLFKDDALNMPS 518
LP++ A L G PP LP T P S PS A N PS
Sbjct: 73 LPVSYATCLVGPPPYRDP-LPPTPPPLSQMPSRLLHSAPNTPS 114
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,701,908
Number of Sequences: 53049
Number of extensions: 662610
Number of successful extensions: 2509
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2279
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2504
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 3013199100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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