Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060740.seq
(680 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70; Eukaryo... 124 2e-27
UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96; Eukaryo... 123 5e-27
UniRef50_Q4U6T4 Cluster: SL3; n=1; Brugia malayi|Rep: SL3 - Brug... 118 1e-25
UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1; ... 116 7e-25
UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2; Scleroti... 113 4e-24
UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1, pu... 105 1e-21
UniRef50_Q5MGK5 Cluster: Ribosomal protein 23; n=2; Endopterygot... 103 5e-21
UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2; Ol... 100 3e-20
UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n... 100 4e-20
UniRef50_Q4UES5 Cluster: 60S ribosomal subunit protein L4/L1, pu... 99 9e-20
UniRef50_Q4FXU6 Cluster: Ribosomal protein L1a, putative; n=1; L... 99 9e-20
UniRef50_A7AUF0 Cluster: Ribosomal protein RPL4A; n=1; Babesia b... 99 1e-19
UniRef50_Q98S44 Cluster: 60s ribosomal protein L1; n=2; Cryptomo... 95 1e-18
UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL... 94 2e-18
UniRef50_Q8SRC2 Cluster: 60S RIBOSOMAL PROTEIN L4; n=1; Encephal... 89 9e-17
UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5; E... 84 3e-15
UniRef50_UPI00005A24EF Cluster: PREDICTED: similar to ribosomal ... 82 1e-14
UniRef50_Q3LWC7 Cluster: Ribosomal protein L4A; n=1; Bigelowiell... 79 7e-14
UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3; Trich... 74 3e-12
UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal ... 68 2e-10
UniRef50_Q00UB0 Cluster: Ribosomal protein RPL1/RPL2/RL4L4; n=1;... 62 9e-09
UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lambli... 58 3e-07
UniRef50_A7R5H8 Cluster: Chromosome undetermined scaffold_974, w... 56 1e-06
UniRef50_Q8TY91 Cluster: 50S ribosomal protein L4P; n=13; Euryar... 54 3e-06
UniRef50_Q8ZW51 Cluster: 50S ribosomal protein L4P; n=9; Archaea... 53 6e-06
UniRef50_Q9HIR0 Cluster: 50S ribosomal protein L4P; n=4; Thermop... 52 1e-05
UniRef50_Q9UXA6 Cluster: 50S ribosomal protein L4P; n=3; Archaea... 44 0.003
UniRef50_O28355 Cluster: 50S ribosomal protein L4P; n=9; Euryarc... 44 0.003
UniRef50_Q95YH2 Cluster: Ribosomal protein L4; n=1; Paramecium c... 44 0.005
UniRef50_Q4FXU7 Cluster: Putative uncharacterized protein; n=2; ... 42 0.018
UniRef50_Q9YFM1 Cluster: 50S ribosomal protein L4P; n=8; Archaea... 40 0.056
UniRef50_Q2NFV7 Cluster: 50S ribosomal protein L4P; n=2; Euryarc... 39 0.098
UniRef50_Q6ZR89 Cluster: CDNA FLJ46551 fis, clone THYMU3038687; ... 38 0.30
UniRef50_Q5NB71 Cluster: Putative uncharacterized protein P0431F... 36 0.91
UniRef50_A3C3B6 Cluster: Putative uncharacterized protein; n=3; ... 35 1.6
UniRef50_UPI000058888F Cluster: PREDICTED: similar to ENSANGP000... 35 2.1
UniRef50_A0RVX5 Cluster: Ribosomal protein L4; n=2; Thermoprotei... 35 2.1
UniRef50_UPI000023E82F Cluster: hypothetical protein FG01599.1; ... 34 3.7
UniRef50_P60847 Cluster: 50S ribosomal protein L4P; n=1; Nanoarc... 34 3.7
UniRef50_UPI00015B4B32 Cluster: PREDICTED: hypothetical protein;... 33 4.9
UniRef50_UPI0000EBE356 Cluster: PREDICTED: hypothetical protein;... 33 4.9
UniRef50_A7SGS6 Cluster: Predicted protein; n=1; Nematostella ve... 33 4.9
UniRef50_Q2UBL5 Cluster: Predicted protein; n=1; Aspergillus ory... 33 4.9
UniRef50_Q0FF01 Cluster: Probable fatty acid desaturase protein;... 33 6.4
UniRef50_UPI0000F2E6E2 Cluster: PREDICTED: hypothetical protein;... 33 8.5
UniRef50_P73828 Cluster: Sensor protein; n=1; Synechocystis sp. ... 33 8.5
UniRef50_A0GGU8 Cluster: Putative uncharacterized protein; n=1; ... 33 8.5
>UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70;
Eukaryota|Rep: 60S ribosomal protein L4 - Homo sapiens
(Human)
Length = 427
Score = 124 bits (300), Expect = 2e-27
Identities = 56/92 (60%), Positives = 60/92 (65%)
Frame = +1
Query: 256 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXX 435
HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 60 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQ 119
Query: 436 XXXXXXXXXXXXXXXXXXQARGHIMKRFPSFP 531
++GH ++ P P
Sbjct: 120 KRYAICSALAASALPALVMSKGHRIEEVPELP 151
Score = 91.9 bits (218), Expect = 1e-17
Identities = 41/57 (71%), Positives = 50/57 (87%)
Frame = +3
Query: 510 EKIPELPLVVADKVQEXNKTKQAVIFLRRLKAWSDILKVYXSQRLRAGKGKMRNRRR 680
E++PELPLVV DKV+ KTK+AV+ L++LKAW+DI KVY SQR+RAGKGKMRNRRR
Sbjct: 145 EEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRR 201
Score = 74.5 bits (175), Expect = 2e-12
Identities = 36/59 (61%), Positives = 45/59 (76%)
Frame = +2
Query: 77 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEA 253
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ A
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELA 58
>UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96;
Eukaryota|Rep: 60S ribosomal protein L4 - Drosophila
melanogaster (Fruit fly)
Length = 401
Score = 123 bits (296), Expect = 5e-27
Identities = 59/103 (57%), Positives = 66/103 (64%)
Frame = +1
Query: 223 EAALLREQGGCHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPW 402
+A + E G HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +
Sbjct: 53 QAYAVSELAG-HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTF 111
Query: 403 RRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIMKRFPSFP 531
RRWH Q++GH++ FP
Sbjct: 112 RRWHRKVNVNQRRYALVSAIAASGVPALVQSKGHVIDGVSEFP 154
Score = 84.6 bits (200), Expect = 2e-15
Identities = 39/55 (70%), Positives = 46/55 (83%)
Frame = +3
Query: 516 IPELPLVVADKVQEXNKTKQAVIFLRRLKAWSDILKVYXSQRLRAGKGKMRNRRR 680
+ E PLVV+D+VQ+ KTKQAVIFLRRLK W+DI KVY SQR RAG+G MR+RRR
Sbjct: 150 VSEFPLVVSDEVQKVQKTKQAVIFLRRLKIWADIQKVYKSQRFRAGRGTMRDRRR 204
Score = 72.5 bits (170), Expect = 9e-12
Identities = 36/61 (59%), Positives = 45/61 (73%)
Frame = +2
Query: 71 MSLSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKE 250
MSL ARPLVSVY+EK+E + LP VFKAPIRPD+VN+VH + +N+RQ Y VS+
Sbjct: 1 MSLGNARPLVSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSEL 60
Query: 251 A 253
A
Sbjct: 61 A 61
>UniRef50_Q4U6T4 Cluster: SL3; n=1; Brugia malayi|Rep: SL3 - Brugia
malayi (Filarial nematode worm)
Length = 306
Score = 118 bits (285), Expect = 1e-25
Identities = 51/53 (96%), Positives = 52/53 (98%)
Frame = +1
Query: 256 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 414
HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 177 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKVFRRWH 229
Score = 55.6 bits (128), Expect = 1e-06
Identities = 27/50 (54%), Positives = 35/50 (70%)
Frame = +2
Query: 104 VYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEA 253
VY++KSE + LP VF+AP+RPD+V+ VH + KN RQPY VS EA
Sbjct: 127 VYNDKSEPTDTQIR-LPGVFRAPLRPDIVSFVHDQIRKNKRQPYAVSVEA 175
>UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 349
Score = 116 bits (278), Expect = 7e-25
Identities = 53/92 (57%), Positives = 56/92 (60%)
Frame = +1
Query: 256 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXX 435
HQTSAESWGTGRAVARIPRV GGGTHR+GQ AFGNMCR GRMFAPTK WR+WH
Sbjct: 36 HQTSAESWGTGRAVARIPRVSGGGTHRAGQAAFGNMCRSGRMFAPTKVWRKWHQKINLNQ 95
Query: 436 XXXXXXXXXXXXXXXXXXQARGHIMKRFPSFP 531
ARGH + P P
Sbjct: 96 KRFATASALAASGSPALLMARGHNVSTVPEVP 127
Score = 45.2 bits (102), Expect = 0.001
Identities = 24/57 (42%), Positives = 34/57 (59%), Gaps = 3/57 (5%)
Frame = +3
Query: 516 IPELPLVVADKV---QEXNKTKQAVIFLRRLKAWSDILKVYXSQRLRAGKGKMRNRR 677
+PE+PLV++ KT AV L+ + A +D K S++LRAGKGK+R RR
Sbjct: 123 VPEVPLVISSTAFADAAIRKTSAAVALLKAVGAGADCEKAKNSRKLRAGKGKLRGRR 179
>UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2;
Sclerotiniaceae|Rep: 60S ribosomal protein L4 -
Sclerotinia sclerotiorum 1980
Length = 373
Score = 113 bits (272), Expect = 4e-24
Identities = 49/58 (84%), Positives = 52/58 (89%)
Frame = +1
Query: 241 EQGGCHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 414
E+ G HQTSAESWGTGRAVARIPRV GGGTHR+GQ AFGNMCR GRMFAPTK WR+WH
Sbjct: 55 EKAG-HQTSAESWGTGRAVARIPRVSGGGTHRAGQAAFGNMCRSGRMFAPTKVWRKWH 111
Score = 63.3 bits (147), Expect = 5e-09
Identities = 31/56 (55%), Positives = 37/56 (66%)
Frame = +2
Query: 86 ARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEA 253
+RP VSV S T G PLP VF +PIRPD+V VH M+KN RQPY VS++A
Sbjct: 3 SRPTVSVLSADG-TATGTTIPLPKVFTSPIRPDIVQTVHTGMAKNKRQPYAVSEKA 57
Score = 44.0 bits (99), Expect = 0.003
Identities = 25/58 (43%), Positives = 36/58 (62%), Gaps = 3/58 (5%)
Frame = +3
Query: 513 KIPELPLVVADKVQEXNK---TKQAVIFLRRLKAWSDILKVYXSQRLRAGKGKMRNRR 677
++ E+PLV+ +V E K T A L+ + A D+ KV S++LRAGKGK+R RR
Sbjct: 145 EVAEVPLVINSEVFEGAKIARTAAAAGLLKTVGALKDVEKVKDSRKLRAGKGKLRGRR 202
>UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1,
putative; n=5; Plasmodium|Rep: 60S ribosomal subunit
protein L4/L1, putative - Plasmodium chabaudi
Length = 411
Score = 105 bits (251), Expect = 1e-21
Identities = 45/55 (81%), Positives = 48/55 (87%)
Frame = +1
Query: 247 GGCHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRW 411
G ++TSAESWGTGRAVARIPRV GGGTHR+GQ AFGNMCRGG MF PTK WRRW
Sbjct: 57 GAGYETSAESWGTGRAVARIPRVPGGGTHRAGQAAFGNMCRGGGMFNPTKIWRRW 111
Score = 48.0 bits (109), Expect = 2e-04
Identities = 23/55 (41%), Positives = 33/55 (60%)
Frame = +2
Query: 77 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCV 241
++ RPL +VY + V G + +P VF+ PIR DL+ + +MSKN R PY V
Sbjct: 1 MATIRPLANVYGINGKKVVGEVE-IPVVFQTPIRHDLIEYIFSNMSKNIRHPYAV 54
Score = 44.4 bits (100), Expect = 0.003
Identities = 21/54 (38%), Positives = 34/54 (62%)
Frame = +3
Query: 516 IPELPLVVADKVQEXNKTKQAVIFLRRLKAWSDILKVYXSQRLRAGKGKMRNRR 677
+ E+PLV ++ ++ KTK A+ FL L ++ ++ S +LRA GKMRNR+
Sbjct: 147 LKEVPLVASNDIESMQKTKDALKFLISLGLRDEVNRLIKSXKLRARXGKMRNRK 200
>UniRef50_Q5MGK5 Cluster: Ribosomal protein 23; n=2;
Endopterygota|Rep: Ribosomal protein 23 - Lonomia
obliqua (Moth)
Length = 274
Score = 103 bits (246), Expect = 5e-21
Identities = 46/57 (80%), Positives = 53/57 (92%)
Frame = +3
Query: 510 EKIPELPLVVADKVQEXNKTKQAVIFLRRLKAWSDILKVYXSQRLRAGKGKMRNRRR 680
+ + E+PLVV+DK+QE NKTKQAVIFLRR+KAWSD+LKVY SQRLRAGKGKMRNRRR
Sbjct: 10 DNVSEIPLVVSDKIQEINKTKQAVIFLRRIKAWSDVLKVYKSQRLRAGKGKMRNRRR 66
>UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2;
Oligohymenophorea|Rep: Ribosomal protein L4, putative -
Paramecium tetraurelia
Length = 406
Score = 100 bits (240), Expect = 3e-20
Identities = 51/103 (49%), Positives = 55/103 (53%)
Frame = +1
Query: 223 EAALLREQGGCHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPW 402
+A + Q G Q SAESWGTGRAVARIPRV G GTHRSGQ AFGN CR GRM P K W
Sbjct: 51 QAHAVNPQAGM-QHSAESWGTGRAVARIPRVSGSGTHRSGQAAFGNQCRKGRMSLPIKVW 109
Query: 403 RRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIMKRFPSFP 531
RRWH ARGH + + P P
Sbjct: 110 RRWHRRVNIKQKRHAAATAVAATGIVPLVLARGHRISQVPQIP 152
Score = 54.4 bits (125), Expect = 2e-06
Identities = 27/55 (49%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Frame = +2
Query: 92 PLVSVYSEKSET-VQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEA 253
PLVSV+S T V PLP VF+ PIRPD+V+ VH +++KN RQ + V+ +A
Sbjct: 5 PLVSVFSADDSTKVTAKHIPLPAVFQTPIRPDIVSFVHTNIAKNRRQAHAVNPQA 59
Score = 52.0 bits (119), Expect = 1e-05
Identities = 22/55 (40%), Positives = 37/55 (67%)
Frame = +3
Query: 513 KIPELPLVVADKVQEXNKTKQAVIFLRRLKAWSDILKVYXSQRLRAGKGKMRNRR 677
++P++PLVV DK++ KT A+ FL+R A+ D+ KV ++ +RAG K R ++
Sbjct: 147 QVPQIPLVVEDKIESYEKTTDALNFLKRFGAFEDVQKVVSTKVVRAGISKQRGKK 201
>UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n=4;
Cryptosporidium|Rep: 60S ribosomal protein-like,
putative - Cryptosporidium parvum Iowa II
Length = 394
Score = 100 bits (239), Expect = 4e-20
Identities = 48/92 (52%), Positives = 52/92 (56%)
Frame = +1
Query: 256 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXX 435
HQ SAESWGTGRAVARIPRV GT RSGQGAFGNMCRGG MF+P K +RR+H
Sbjct: 61 HQHSAESWGTGRAVARIPRVSASGTSRSGQGAFGNMCRGGHMFSPNKTYRRFHRKINTTE 120
Query: 436 XXXXXXXXXXXXXXXXXXQARGHIMKRFPSFP 531
ARGH + P P
Sbjct: 121 KRHAVAAAIAATGCPSLVMARGHRINNVPELP 152
Score = 56.4 bits (130), Expect = 6e-07
Identities = 28/59 (47%), Positives = 38/59 (64%)
Frame = +2
Query: 77 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEA 253
++ ARP+VSV+ T ++ PLP VF +P+R DLV V +MSKN RQ Y VS +A
Sbjct: 1 MTFARPIVSVFPSNDSTKATSSIPLPTVFVSPLRHDLVRYVFTNMSKNKRQAYGVSTKA 59
Score = 53.2 bits (122), Expect = 6e-06
Identities = 27/57 (47%), Positives = 38/57 (66%), Gaps = 2/57 (3%)
Frame = +3
Query: 516 IPELPLVVADKVQEXNKTKQAVIFLRRL-KAWSDILK-VYXSQRLRAGKGKMRNRRR 680
+PELPLV+++++Q NKT AV F + K + +K + S +R GKGKMRNRRR
Sbjct: 148 VPELPLVISNEIQNINKTSTAVEFFKNFGKGLEEEMKRIESSIAIRCGKGKMRNRRR 204
>UniRef50_Q4UES5 Cluster: 60S ribosomal subunit protein L4/L1,
putative; n=2; Theileria|Rep: 60S ribosomal subunit
protein L4/L1, putative - Theileria annulata
Length = 426
Score = 99.1 bits (236), Expect = 9e-20
Identities = 43/92 (46%), Positives = 52/92 (56%)
Frame = +1
Query: 256 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXX 435
+QTSA SWGTGRA++R PRV+GGGTHRSGQ A+ N CR G MFAPT+ WR WH
Sbjct: 59 YQTSARSWGTGRALSRTPRVKGGGTHRSGQAAYANFCRAGGMFAPTRTWRHWHRKINLKE 118
Query: 436 XXXXXXXXXXXXXXXXXXQARGHIMKRFPSFP 531
+RGH ++ P P
Sbjct: 119 KRLALAVSVAATASVPLVMSRGHRVESVPELP 150
Score = 54.8 bits (126), Expect = 2e-06
Identities = 27/55 (49%), Positives = 37/55 (67%)
Frame = +2
Query: 83 VARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSK 247
V RP+VSV+S +E G+ +P VF P+R DLV+ VH +MSKN RQ Y +S+
Sbjct: 2 VHRPVVSVFSVSTEKRMGSTI-MPRVFSTPLRSDLVHYVHTNMSKNKRQAYAISR 55
Score = 36.7 bits (81), Expect = 0.52
Identities = 19/53 (35%), Positives = 31/53 (58%)
Frame = +3
Query: 510 EKIPELPLVVADKVQEXNKTKQAVIFLRRLKAWSDILKVYXSQRLRAGKGKMR 668
E +PELPLV+ D ++ KT+ AV L + ++ +V ++R + KGK R
Sbjct: 144 ESVPELPLVLDDTMETLTKTRDAVELLNSMGLADELKRVSVTKRTKR-KGKKR 195
>UniRef50_Q4FXU6 Cluster: Ribosomal protein L1a, putative; n=1;
Leishmania major strain Friedlin|Rep: Ribosomal protein
L1a, putative - Leishmania major strain Friedlin
Length = 432
Score = 99.1 bits (236), Expect = 9e-20
Identities = 47/89 (52%), Positives = 51/89 (57%)
Frame = +1
Query: 265 SAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXX 444
SA SWGTGRAVARIPR+ GGGT SG GAFGNMCRGGRMFAPTK +RRWH
Sbjct: 62 SAHSWGTGRAVARIPRISGGGTSTSGAGAFGNMCRGGRMFAPTKIFRRWHRKINLHQKRF 121
Query: 445 XXXXXXXXXXXXXXXQARGHIMKRFPSFP 531
+RGH + P P
Sbjct: 122 AVVSALAASSVPSLVMSRGHQIGNVPEVP 150
Score = 64.5 bits (150), Expect = 2e-09
Identities = 32/54 (59%), Positives = 39/54 (72%)
Frame = +2
Query: 86 ARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSK 247
ARP VSVYS S++V G PLP VF APIR D+V VH +M+KNSRQ Y V++
Sbjct: 3 ARPSVSVYSASSDSVVGTC-PLPAVFTAPIRSDIVKFVHTNMAKNSRQAYAVNR 55
Score = 64.1 bits (149), Expect = 3e-09
Identities = 28/54 (51%), Positives = 40/54 (74%)
Frame = +3
Query: 516 IPELPLVVADKVQEXNKTKQAVIFLRRLKAWSDILKVYXSQRLRAGKGKMRNRR 677
+PE+PLVV D +Q KTK+A+ FL+ + A D+ +V S+ +RAG+GKMRNRR
Sbjct: 146 VPEVPLVVEDSIQGYEKTKEAMAFLKAIAAIDDVNRVNDSREIRAGRGKMRNRR 199
>UniRef50_A7AUF0 Cluster: Ribosomal protein RPL4A; n=1; Babesia
bovis|Rep: Ribosomal protein RPL4A - Babesia bovis
Length = 360
Score = 98.7 bits (235), Expect = 1e-19
Identities = 38/53 (71%), Positives = 46/53 (86%)
Frame = +1
Query: 256 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 414
+QTSA SWGTGRA+AR+PRV+GGGTHR+GQ A+ N CR G M+APT+ WRRWH
Sbjct: 59 YQTSARSWGTGRAMARVPRVKGGGTHRAGQAAYANFCRAGGMYAPTRVWRRWH 111
Score = 50.0 bits (114), Expect = 5e-05
Identities = 28/53 (52%), Positives = 33/53 (62%)
Frame = +2
Query: 89 RPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSK 247
RP VSV++ GA +P VF AP+R DLV VH +MSKN RQ Y VSK
Sbjct: 4 RPEVSVHNATDGERVGATL-MPKVFSAPLRLDLVRIVHTNMSKNRRQAYAVSK 55
Score = 33.5 bits (73), Expect = 4.9
Identities = 17/52 (32%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Frame = +3
Query: 510 EKIPELPLVVADKVQEXNKTKQAVIFLRRLKAWSDILKV-YXSQRLRAGKGK 662
E + E+P+VV D +++ NKTK AV L + +++ ++ + R R G+ K
Sbjct: 144 EALREVPMVVDDAIEQINKTKDAVKLLETIGLGAELKRIDKVTGRARDGRKK 195
>UniRef50_Q98S44 Cluster: 60s ribosomal protein L1; n=2;
Cryptomonadaceae|Rep: 60s ribosomal protein L1 -
Guillardia theta (Cryptomonas phi)
Length = 255
Score = 95.1 bits (226), Expect = 1e-18
Identities = 43/92 (46%), Positives = 52/92 (56%)
Frame = +1
Query: 262 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXX 441
TSA SWGTGRAV+R+PRV G GTHRSGQGA N CRGGR+F PT WR+WH
Sbjct: 57 TSAVSWGTGRAVSRVPRVPGSGTHRSGQGAIANFCRGGRIFNPTTIWRKWHHKINKNQRK 116
Query: 442 XXXXXXXXXXXXXXXXQARGHIMKRFPSFPWL 537
+RG+ +K P P++
Sbjct: 117 SAIFSAIASSSIVSIIVSRGYRVKTIPEIPFV 148
Score = 45.6 bits (103), Expect = 0.001
Identities = 21/54 (38%), Positives = 35/54 (64%)
Frame = +3
Query: 516 IPELPLVVADKVQEXNKTKQAVIFLRRLKAWSDILKVYXSQRLRAGKGKMRNRR 677
IPE+P V+ D +++ KT+ + L L + I++ ++L++GKGKMRNRR
Sbjct: 142 IPEIPFVIEDSIEKIPKTRDLIKILTTLGI-NSIVRNKLKRKLKSGKGKMRNRR 194
>UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL4 -
Streblomastix strix
Length = 492
Score = 94.3 bits (224), Expect = 2e-18
Identities = 43/92 (46%), Positives = 49/92 (53%)
Frame = +1
Query: 256 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXX 435
HQ SAESWGTGRAVAR+PR+ G GT R+GQ AF N RGG M++P K WRRWH
Sbjct: 60 HQHSAESWGTGRAVARVPRISGSGTSRNGQAAFANSARGGHMYSPLKVWRRWHRMVNVTQ 119
Query: 436 XXXXXXXXXXXXXXXXXXQARGHIMKRFPSFP 531
ARGH + P P
Sbjct: 120 RRFAMCSAIAASSNPSLVLARGHKIDNVPELP 151
Score = 60.9 bits (141), Expect = 3e-08
Identities = 29/56 (51%), Positives = 38/56 (67%)
Frame = +3
Query: 510 EKIPELPLVVADKVQEXNKTKQAVIFLRRLKAWSDILKVYXSQRLRAGKGKMRNRR 677
+ +PELPLVV+D V++ KTK+AV L LKA D+ S+R+R G GK RNRR
Sbjct: 145 DNVPELPLVVSDDVEQIKKTKEAVKVLAALKASDDVKHSAESKRIRVGSGKARNRR 200
Score = 38.7 bits (86), Expect = 0.13
Identities = 18/47 (38%), Positives = 30/47 (63%)
Frame = +2
Query: 95 LVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPY 235
L +VY+ + A P + +PIRPD+V+ VH++++KN RQP+
Sbjct: 7 LTTVYNTDGKARDTTAVPSVIRY-SPIRPDVVHFVHMNLAKNERQPF 52
>UniRef50_Q8SRC2 Cluster: 60S RIBOSOMAL PROTEIN L4; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L4 -
Encephalitozoon cuniculi
Length = 335
Score = 89.0 bits (211), Expect = 9e-17
Identities = 38/51 (74%), Positives = 42/51 (82%)
Frame = +1
Query: 259 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRW 411
Q SAESWGTGRA+AR+PRV+GGGT R+GQGAF N CR GRM PTK RRW
Sbjct: 58 QHSAESWGTGRAIARVPRVKGGGTRRAGQGAFANFCRKGRMAHPTKTHRRW 108
Score = 52.4 bits (120), Expect = 1e-05
Identities = 24/51 (47%), Positives = 34/51 (66%)
Frame = +3
Query: 525 LPLVVADKVQEXNKTKQAVIFLRRLKAWSDILKVYXSQRLRAGKGKMRNRR 677
LP++V+D + + KTK AV LR L ++ +V S+ +R GKGKMRNRR
Sbjct: 147 LPIIVSDDIAKARKTKDAVEILRNLNMTEELKRVEKSRGVRCGKGKMRNRR 197
Score = 36.7 bits (81), Expect = 0.52
Identities = 21/52 (40%), Positives = 26/52 (50%)
Frame = +2
Query: 98 VSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEA 253
++ Y TV+ LP VF PIR DLV + +RQPY VSK A
Sbjct: 5 INCYEADGVTVKKTLD-LPEVFSVPIRQDLVLKTYSLYRMKTRQPYAVSKNA 55
>UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L4 - Entamoeba histolytica HM-1:IMSS
Length = 431
Score = 83.8 bits (198), Expect = 3e-15
Identities = 43/98 (43%), Positives = 52/98 (53%)
Frame = +1
Query: 259 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXX 438
Q SA SWGTGRAVARIPR+ G G+ R+GQGAFGNM R G MF+P K +R+W
Sbjct: 61 QHSAISWGTGRAVARIPRISGSGSGRNGQGAFGNMTRKGHMFSPLKNFRKWQRKTPKQMR 120
Query: 439 XXXXXXXXXXXXXXXXXQARGHIMKRFPSFPWL*PTKS 552
ARGH + P P + +KS
Sbjct: 121 RFAVASCIAASAVPALVSARGHHIAGVPQIPLVVNSKS 158
Score = 62.5 bits (145), Expect = 9e-09
Identities = 29/59 (49%), Positives = 42/59 (71%), Gaps = 1/59 (1%)
Frame = +3
Query: 504 HYEKIPELPLVVADK-VQEXNKTKQAVIFLRRLKAWSDILKVYXSQRLRAGKGKMRNRR 677
H +P++PLVV K + KTKQAV L+++ A+SD+LKV S+ +RAG+GKMR R+
Sbjct: 143 HIAGVPQIPLVVNSKSISVIKKTKQAVYLLKKINAYSDVLKVIASKTVRAGQGKMRGRK 201
Score = 46.0 bits (104), Expect = 9e-04
Identities = 24/56 (42%), Positives = 35/56 (62%)
Frame = +2
Query: 86 ARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEA 253
+RP V++Y + + LP VF APIR D+V+ V+ + SKN+RQP VS +A
Sbjct: 3 SRPFVTIYDGITGEAEKTQVRLPAVFLAPIRGDVVHFVYRNQSKNTRQPEGVSTKA 58
>UniRef50_UPI00005A24EF Cluster: PREDICTED: similar to ribosomal
protein L4; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L4 - Canis familiaris
Length = 253
Score = 82.2 bits (194), Expect = 1e-14
Identities = 36/53 (67%), Positives = 46/53 (86%)
Frame = +3
Query: 513 KIPELPLVVADKVQEXNKTKQAVIFLRRLKAWSDILKVYXSQRLRAGKGKMRN 671
++PELPLVV DKV+ KT++AV+ L++LKAW+DI KVY SQR+RAGKGKMRN
Sbjct: 9 EVPELPLVVEDKVEGYKKTEEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRN 61
>UniRef50_Q3LWC7 Cluster: Ribosomal protein L4A; n=1; Bigelowiella
natans|Rep: Ribosomal protein L4A - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 278
Score = 79.4 bits (187), Expect = 7e-14
Identities = 38/108 (35%), Positives = 55/108 (50%)
Frame = +1
Query: 256 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXX 435
+Q SA+SWG GR +ARIPR++G GT ++GQGA NMCRGGR+F ++W+
Sbjct: 61 NQVSAKSWGPGRGLARIPRIKGSGTRKAGQGALANMCRGGRLFGNRNYSKKWNIKTNRKV 120
Query: 436 XXXXXXXXXXXXXXXXXXQARGHIMKRFPSFPWL*PTKSKXSTRPNRL 579
+RGH +K +FP + + K P+ L
Sbjct: 121 KVSAFKTALLSTLFETLVVSRGHSLKDVKNFPMIIDSILKYIWHPSEL 168
>UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3;
Trichomonas vaginalis G3|Rep: Ribosomal protein,
putative - Trichomonas vaginalis G3
Length = 370
Score = 74.1 bits (174), Expect = 3e-12
Identities = 36/91 (39%), Positives = 44/91 (48%)
Frame = +1
Query: 259 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXX 438
+ SA SWGTGRA A +PRV G G++R+GQGA+ N CRGG F P RRW
Sbjct: 58 KVSAISWGTGRAKACVPRVNGSGSNRNGQGAYANFCRGGHRFNPPTLLRRWFRPVPSRQR 117
Query: 439 XXXXXXXXXXXXXXXXXQARGHIMKRFPSFP 531
QARGH++ P
Sbjct: 118 KFAIASAIAATAVVPLVQARGHVLGEVKEVP 148
Score = 44.0 bits (99), Expect = 0.003
Identities = 19/52 (36%), Positives = 32/52 (61%)
Frame = +3
Query: 513 KIPELPLVVADKVQEXNKTKQAVIFLRRLKAWSDILKVYXSQRLRAGKGKMR 668
++ E+P+VV D VQE +T+ AV L+++ + D+ +V R+ KGK R
Sbjct: 143 EVKEVPIVVVDAVQEIKRTRDAVELLKKVGVYGDVQRVLDGSVHRSSKGKFR 194
Score = 38.7 bits (86), Expect = 0.13
Identities = 17/51 (33%), Positives = 36/51 (70%)
Frame = +2
Query: 83 VARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPY 235
++R V+V +++ + + + LP VF PIR ++V +V+V+++KN++QP+
Sbjct: 1 MSRQTVNVLTQEGQ--KASTIELPKVFDTPIRAEVVKEVYVNLAKNAQQPH 49
>UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal
protein L4; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L4 - Canis familiaris
Length = 248
Score = 68.1 bits (159), Expect = 2e-10
Identities = 30/44 (68%), Positives = 37/44 (84%)
Frame = +3
Query: 546 KVQEXNKTKQAVIFLRRLKAWSDILKVYXSQRLRAGKGKMRNRR 677
KV+ KTK+ V+ L++LKAW+DI KVY SQR+RAGKGKMRNRR
Sbjct: 98 KVEGYKKTKEEVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRR 141
Score = 45.6 bits (103), Expect = 0.001
Identities = 22/43 (51%), Positives = 28/43 (65%)
Frame = +1
Query: 199 SRFYVQELEAALLREQGGCHQTSAESWGTGRAVARIPRVRGGG 327
S + + + + E G +QTSAESWGTGRA +PRVRGGG
Sbjct: 32 SNLHKNDSQPYAVSESAG-YQTSAESWGTGRARGPMPRVRGGG 73
>UniRef50_Q00UB0 Cluster: Ribosomal protein RPL1/RPL2/RL4L4; n=1;
Ostreococcus tauri|Rep: Ribosomal protein
RPL1/RPL2/RL4L4 - Ostreococcus tauri
Length = 404
Score = 62.5 bits (145), Expect = 9e-09
Identities = 30/56 (53%), Positives = 40/56 (71%)
Frame = +3
Query: 510 EKIPELPLVVADKVQEXNKTKQAVIFLRRLKAWSDILKVYXSQRLRAGKGKMRNRR 677
E +PE+PLVV D KT +AV L++L A++DI KV S+ +R+GKGKMRNRR
Sbjct: 148 EGVPEVPLVVDDSASSIKKTAKAVELLKQLGAYADIEKVKASRNVRSGKGKMRNRR 203
Score = 35.9 bits (79), Expect = 0.91
Identities = 15/29 (51%), Positives = 21/29 (72%)
Frame = +2
Query: 134 GAAKPLPFVFKAPIRPDLVNDVHVSMSKN 220
GA+ +P VF +PIR D+VN VH ++KN
Sbjct: 15 GASCAMPEVFLSPIRADIVNAVHTGLAKN 43
>UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_79_45017_44067 - Giardia lamblia
ATCC 50803
Length = 316
Score = 57.6 bits (133), Expect = 3e-07
Identities = 36/103 (34%), Positives = 44/103 (42%)
Frame = +1
Query: 259 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXX 438
Q +A SWG GRAVAR+PR G G GA+ N RGG M PT RRW
Sbjct: 57 QCTAHSWGPGRAVARLPRKHG------GIGAYANFARGGHMAHPTTVIRRWCRKVNLNQR 110
Query: 439 XXXXXXXXXXXXXXXXXQARGHIMKRFPSFPWL*PTKSKXSTR 567
+ARGH + PS P + T + T+
Sbjct: 111 RYAVASALAASANAALVEARGHRIADVPSIPLVVDTDNVTKTK 153
Score = 45.2 bits (102), Expect = 0.001
Identities = 23/54 (42%), Positives = 29/54 (53%)
Frame = +2
Query: 92 PLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEA 253
P V V+ V A P P VF P+RPD++N VH + K R PY VS+ A
Sbjct: 3 PTVKVFGPTGTQV--AELPRPKVFNVPLRPDIINFVHTQLRKCLRTPYAVSRYA 54
Score = 44.0 bits (99), Expect = 0.003
Identities = 21/54 (38%), Positives = 32/54 (59%)
Frame = +3
Query: 516 IPELPLVVADKVQEXNKTKQAVIFLRRLKAWSDILKVYXSQRLRAGKGKMRNRR 677
+P +PLVV KTK A+ ++ + D+ + S+ +RAG+GKMRNRR
Sbjct: 137 VPSIPLVV--DTDNVTKTKDALAIIKAVGVLRDVERCKDSRHIRAGRGKMRNRR 188
>UniRef50_A7R5H8 Cluster: Chromosome undetermined scaffold_974,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_974, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 386
Score = 55.6 bits (128), Expect = 1e-06
Identities = 25/56 (44%), Positives = 33/56 (58%)
Frame = +3
Query: 510 EKIPELPLVVADKVQEXNKTKQAVIFLRRLKAWSDILKVYXSQRLRAGKGKMRNRR 677
E +PELPLV+ D + KT A+ L++ A+ D K S + GKGKMRNRR
Sbjct: 8 ESVPELPLVIGDSAESVEKTSAAIDILKQFDAYLDTEKAKDSHAIHPGKGKMRNRR 63
>UniRef50_Q8TY91 Cluster: 50S ribosomal protein L4P; n=13;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Methanopyrus kandleri
Length = 260
Score = 54.0 bits (124), Expect = 3e-06
Identities = 21/56 (37%), Positives = 37/56 (66%)
Frame = +3
Query: 510 EKIPELPLVVADKVQEXNKTKQAVIFLRRLKAWSDILKVYXSQRLRAGKGKMRNRR 677
+ +P LP+VV D+++ NK ++ F + + W+D+ + ++R+RAGKGK R RR
Sbjct: 139 DDVPHLPVVVVDELKSLNKAREVREFFKSVGLWADVERAKSNRRIRAGKGKRRGRR 194
Score = 43.6 bits (98), Expect = 0.005
Identities = 28/92 (30%), Positives = 38/92 (41%), Gaps = 1/92 (1%)
Frame = +1
Query: 259 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGG-RMFAPTKPWRRWHXXXXXXX 435
+TSAESWG G VA +PRV+G +G+ A GG + APT P + W
Sbjct: 55 RTSAESWGAGHGVAMVPRVKGRRHPAAGRAARVAQAVGGQKAHAPT-PEKDWTQRVNRKE 113
Query: 436 XXXXXXXXXXXXXXXXXXQARGHIMKRFPSFP 531
+ RGH++ P P
Sbjct: 114 RRAALRSALAATAKPEFVKERGHVIDDVPHLP 145
>UniRef50_Q8ZW51 Cluster: 50S ribosomal protein L4P; n=9;
Archaea|Rep: 50S ribosomal protein L4P - Pyrobaculum
aerophilum
Length = 283
Score = 53.2 bits (122), Expect = 6e-06
Identities = 23/56 (41%), Positives = 33/56 (58%)
Frame = +3
Query: 510 EKIPELPLVVADKVQEXNKTKQAVIFLRRLKAWSDILKVYXSQRLRAGKGKMRNRR 677
EK+P LP+VV ++ N+ K+A L W D+ + ++RAGKGKMR RR
Sbjct: 162 EKVPSLPVVVVGDAEKINRAKEAKKLFEALGLWPDVERAAEGVKIRAGKGKMRGRR 217
Score = 46.8 bits (106), Expect = 5e-04
Identities = 29/96 (30%), Positives = 40/96 (41%)
Frame = +1
Query: 244 QGGCHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXX 423
+G + S ES+G G +ARIPR +G R G F RGGR P K ++ H
Sbjct: 76 EGAGKEHSCESFGVGLGIARIPRYKGSLWPR---GCFAPNTRGGRRAHPPKVEKKLHEEI 132
Query: 424 XXXXXXXXXXXXXXXXXXXXXXQARGHIMKRFPSFP 531
ARGH++++ PS P
Sbjct: 133 NKKEKKLAIRSAIAATAYRSWVAARGHVVEKVPSLP 168
>UniRef50_Q9HIR0 Cluster: 50S ribosomal protein L4P; n=4;
Thermoplasmatales|Rep: 50S ribosomal protein L4P -
Thermoplasma acidophilum
Length = 255
Score = 52.4 bits (120), Expect = 1e-05
Identities = 24/52 (46%), Positives = 34/52 (65%)
Frame = +3
Query: 522 ELPLVVADKVQEXNKTKQAVIFLRRLKAWSDILKVYXSQRLRAGKGKMRNRR 677
+LP+VV D V+ NKTK A+ L+ L + DI + + +RAG+GKMR RR
Sbjct: 140 KLPIVVEDGVEGINKTKDAIALLKNLGVYEDIERSREGKHIRAGRGKMRGRR 191
>UniRef50_Q9UXA6 Cluster: 50S ribosomal protein L4P; n=3;
Archaea|Rep: 50S ribosomal protein L4P - Sulfolobus
solfataricus
Length = 267
Score = 44.0 bits (99), Expect = 0.003
Identities = 19/50 (38%), Positives = 30/50 (60%)
Frame = +3
Query: 528 PLVVADKVQEXNKTKQAVIFLRRLKAWSDILKVYXSQRLRAGKGKMRNRR 677
P+VV D + T + FL+++ + D+ +V R+RAGKGKMR R+
Sbjct: 147 PIVVTDDIVNLKTTSEVEEFLKKIGVYDDVERVKERIRIRAGKGKMRGRK 196
Score = 35.1 bits (77), Expect = 1.6
Identities = 26/98 (26%), Positives = 38/98 (38%)
Frame = +1
Query: 238 REQGGCHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHX 417
R+ +TSAES+G +AR+PRV+ SG+ A GGR+ P ++
Sbjct: 55 RDPNAGKRTSAESFGINLGMARVPRVK-----NSGEAALAPNTVGGRLAFPPSVNKKLAE 109
Query: 418 XXXXXXXXXXXXXXXXXXXXXXXXQARGHIMKRFPSFP 531
+ARGH+ K FP
Sbjct: 110 EANVKEKRLAVISALSATADIAFVRARGHVFKDSVRFP 147
>UniRef50_O28355 Cluster: 50S ribosomal protein L4P; n=9;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Archaeoglobus fulgidus
Length = 252
Score = 44.0 bits (99), Expect = 0.003
Identities = 19/52 (36%), Positives = 32/52 (61%)
Frame = +3
Query: 522 ELPLVVADKVQEXNKTKQAVIFLRRLKAWSDILKVYXSQRLRAGKGKMRNRR 677
ELP VV+++++ +TK R + ++D+ + +R RAG+GKMR RR
Sbjct: 136 ELPKVVSNELESVKRTKDVAEVFRAIGVYADVERAKERKRYRAGRGKMRGRR 187
>UniRef50_Q95YH2 Cluster: Ribosomal protein L4; n=1; Paramecium
caudatum|Rep: Ribosomal protein L4 - Paramecium caudatum
Length = 252
Score = 43.6 bits (98), Expect = 0.005
Identities = 19/47 (40%), Positives = 30/47 (63%)
Frame = +3
Query: 537 VADKVQEXNKTKQAVIFLRRLKAWSDILKVYXSQRLRAGKGKMRNRR 677
V DK++ KTK A+ FL+R A+ D+ KV ++ +RAG K R ++
Sbjct: 1 VEDKIESYEKTKDALNFLKRFGAFEDVQKVVSTKTIRAGVSKSRGKK 47
>UniRef50_Q4FXU7 Cluster: Putative uncharacterized protein; n=2;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major strain Friedlin
Length = 534
Score = 41.5 bits (93), Expect = 0.018
Identities = 18/35 (51%), Positives = 20/35 (57%)
Frame = +3
Query: 324 WYS*VRSGCLR*HVSWWTYVRPHEALAALAPSRQP 428
W VR C+R HV WW +VR E L LAP QP
Sbjct: 134 WNEHVRRRCVRQHVPWWPHVRADEDLPPLAPQDQP 168
>UniRef50_Q9YFM1 Cluster: 50S ribosomal protein L4P; n=8;
Archaea|Rep: 50S ribosomal protein L4P - Aeropyrum
pernix
Length = 272
Score = 39.9 bits (89), Expect = 0.056
Identities = 22/46 (47%), Positives = 28/46 (60%)
Frame = +1
Query: 259 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK 396
+TSA S G GR VAR+PR++G S + A NM RGGR P +
Sbjct: 68 RTSAVSLGVGRGVARVPRIKG-----SLRAALVNMARGGRAAHPPR 108
Score = 36.7 bits (81), Expect = 0.52
Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = +3
Query: 498 RTHYEKIPELPLVVADKV-QEXNKTKQAVIFLRRLKAWSDILKVYXSQRLRAGKGKMRNR 674
R H LP+V+ V + + ++A L + + D+L+ +R AGKGKMR R
Sbjct: 142 RGHRFSAETLPIVLDSSVLAKISTAREARSLLESVGVYEDVLRAKEGKRYNAGKGKMRGR 201
Query: 675 R 677
R
Sbjct: 202 R 202
>UniRef50_Q2NFV7 Cluster: 50S ribosomal protein L4P; n=2;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 259
Score = 39.1 bits (87), Expect = 0.098
Identities = 14/55 (25%), Positives = 33/55 (60%)
Frame = +3
Query: 513 KIPELPLVVADKVQEXNKTKQAVIFLRRLKAWSDILKVYXSQRLRAGKGKMRNRR 677
++ ++P V+ D+++ TK+ + L DI++ +++++GKGK+R R+
Sbjct: 136 ELEQIPFVIDDEIETVKTTKETREIFKDLGIMDDIVRAKKGRKIKSGKGKLRGRK 190
Score = 35.5 bits (78), Expect = 1.2
Identities = 24/93 (25%), Positives = 37/93 (39%)
Frame = +1
Query: 259 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXX 438
+T+AES+G+GR A +PRV+G S + AF GGR P + +H
Sbjct: 56 RTTAESFGSGRGAAMVPRVKG-----SSKAAFVPQAIGGRKAHPPRVNTIYHEKINKKER 110
Query: 439 XXXXXXXXXXXXXXXXXQARGHIMKRFPSFPWL 537
+ RGH + P++
Sbjct: 111 TLAIRSAIAATANKELVEQRGHQVSELEQIPFV 143
>UniRef50_Q6ZR89 Cluster: CDNA FLJ46551 fis, clone THYMU3038687;
n=1; Homo sapiens|Rep: CDNA FLJ46551 fis, clone
THYMU3038687 - Homo sapiens (Human)
Length = 189
Score = 37.5 bits (83), Expect = 0.30
Identities = 22/74 (29%), Positives = 30/74 (40%), Gaps = 5/74 (6%)
Frame = +3
Query: 285 WTCCRPNSACPWW-----WYS*VRSGCLR*HVSWWTYVRPHEALAALAPSRQPPTAESGL 449
WT CR +AC W W++ V +GC W + H R+P E L
Sbjct: 79 WTGCRSTAACSRWRGCRPWWASVCTGCRSCVQRWRNSHQDHVLWGGPPEPRRPVGVERSL 138
Query: 450 GGSRCCYRRPSARS 491
G+ C P+ RS
Sbjct: 139 HGAPSCLSTPAPRS 152
>UniRef50_Q5NB71 Cluster: Putative uncharacterized protein
P0431F01.18; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
P0431F01.18 - Oryza sativa subsp. japonica (Rice)
Length = 320
Score = 35.9 bits (79), Expect = 0.91
Identities = 19/42 (45%), Positives = 21/42 (50%)
Frame = +1
Query: 250 GCHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGG 375
G AE + T AR PR GGG HR GA G + RGG
Sbjct: 186 GAPHAEAEPF-TAPLRARRPRAAGGGKHRGAHGANGGVARGG 226
>UniRef50_A3C3B6 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 150
Score = 35.1 bits (77), Expect = 1.6
Identities = 21/47 (44%), Positives = 23/47 (48%)
Frame = +1
Query: 238 REQGGCHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGR 378
RE GG A+SW TGRA A + R R GG R A N G R
Sbjct: 30 REGGG----GAQSWATGRAAAELGRGRKGGRRRGLAQAAANSGEGNR 72
>UniRef50_UPI000058888F Cluster: PREDICTED: similar to
ENSANGP00000014064; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to ENSANGP00000014064
- Strongylocentrotus purpuratus
Length = 300
Score = 34.7 bits (76), Expect = 2.1
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -2
Query: 370 HDTCYRRHPDRTYEYHHHGHAEFGRQH 290
H+ YR H + +HHHGH+ G H
Sbjct: 106 HERAYRPHSNSDGHHHHHGHSHHGHSH 132
>UniRef50_A0RVX5 Cluster: Ribosomal protein L4; n=2;
Thermoprotei|Rep: Ribosomal protein L4 - Cenarchaeum
symbiosum
Length = 271
Score = 34.7 bits (76), Expect = 2.1
Identities = 17/38 (44%), Positives = 20/38 (52%)
Frame = +1
Query: 283 TGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK 396
TG ARI R++GGG R G+ RGGR P K
Sbjct: 65 TGHGQARIARMKGGGGRRRGEAGEVASIRGGRQAHPPK 102
>UniRef50_UPI000023E82F Cluster: hypothetical protein FG01599.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG01599.1 - Gibberella zeae PH-1
Length = 1347
Score = 33.9 bits (74), Expect = 3.7
Identities = 13/39 (33%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Frame = -2
Query: 379 YVHHD-TCYRRHPDRTYEYHHHGHAEFGRQHVQYPMIQH 266
Y H+D Y +H D + HHHG +G H + +H
Sbjct: 478 YDHNDYNYYHKHHDNKHYDHHHGDKHYGHHHEHHKHYEH 516
>UniRef50_P60847 Cluster: 50S ribosomal protein L4P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L4P -
Nanoarchaeum equitans
Length = 268
Score = 33.9 bits (74), Expect = 3.7
Identities = 18/47 (38%), Positives = 28/47 (59%)
Frame = +3
Query: 534 VVADKVQEXNKTKQAVIFLRRLKAWSDILKVYXSQRLRAGKGKMRNR 674
+V D +++ KTK+ L +L ++ +VY +R RAGKGK R R
Sbjct: 154 IVVDGLEQLRKTKEIQQLLLKLGLEKELERVYEIKR-RAGKGKRRGR 199
>UniRef50_UPI00015B4B32 Cluster: PREDICTED: hypothetical protein;
n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
protein - Nasonia vitripennis
Length = 1628
Score = 33.5 bits (73), Expect = 4.9
Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Frame = -2
Query: 355 RRHPDRTYEYHHHGHAEFGRQHVQ-YPMIQHWF 260
R PD + +HHHGH G HV+ YP F
Sbjct: 181 RGAPDTRHGHHHHGHHNHGHHHVEPYPATDSLF 213
>UniRef50_UPI0000EBE356 Cluster: PREDICTED: hypothetical protein;
n=1; Bos taurus|Rep: PREDICTED: hypothetical protein -
Bos taurus
Length = 220
Score = 33.5 bits (73), Expect = 4.9
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = +1
Query: 220 LEAALLREQGGCHQTSAESWGTGRAVARIPRVRGGGTHRSG 342
L A+ R GG +T+ + G G AR+P RGG RSG
Sbjct: 100 LSASSGRAAGGGRETATRAGGGGPRSARVPGCRGGARSRSG 140
>UniRef50_A7SGS6 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 263
Score = 33.5 bits (73), Expect = 4.9
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = -2
Query: 382 TYVHHDTCYRRHPDRTYEYHHHGHAEFGRQHVQYPMIQH 266
TY+ H Y +HP T+ YHH H + ++ Q+P + H
Sbjct: 114 TYLTHR--YHQHPQVTHRYHHQ-HPQVTHRYHQHPQVTH 149
>UniRef50_Q2UBL5 Cluster: Predicted protein; n=1; Aspergillus
oryzae|Rep: Predicted protein - Aspergillus oryzae
Length = 538
Score = 33.5 bits (73), Expect = 4.9
Identities = 16/36 (44%), Positives = 20/36 (55%)
Frame = -3
Query: 543 RLQPREARESFHNVSSSLNERWDAGSSNGCRQGRSP 436
R++ R++R S S WDA SSNG RQ SP
Sbjct: 314 RIEKRDSRRSRKRKERSWEPAWDAPSSNGWRQTSSP 349
>UniRef50_Q0FF01 Cluster: Probable fatty acid desaturase protein;
n=1; alpha proteobacterium HTCC2255|Rep: Probable fatty
acid desaturase protein - alpha proteobacterium HTCC2255
Length = 347
Score = 33.1 bits (72), Expect = 6.4
Identities = 18/49 (36%), Positives = 22/49 (44%)
Frame = -2
Query: 379 YVHHDTCYRRHPDRTYEYHHHGHAEFGRQHVQYPMIQHWFGDSLLAHAV 233
YV H H DR E+ H A G H P+I HWF ++ H V
Sbjct: 238 YVQHQF-EDTHWDREEEWDMHKAALEGSSHYDLPLILHWFSANIGIHHV 285
>UniRef50_UPI0000F2E6E2 Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 293
Score = 32.7 bits (71), Expect = 8.5
Identities = 18/37 (48%), Positives = 19/37 (51%)
Frame = +3
Query: 384 RPHEALAALAPSRQPPTAESGLGGSRCCYRRPSARSG 494
RP A AA P RQ P E GGS Y P+ RSG
Sbjct: 122 RPGPAQAARPPPRQWPCTECPGGGSGVVYHLPTERSG 158
>UniRef50_P73828 Cluster: Sensor protein; n=1; Synechocystis sp. PCC
6803|Rep: Sensor protein - Synechocystis sp. (strain PCC
6803)
Length = 1014
Score = 32.7 bits (71), Expect = 8.5
Identities = 16/55 (29%), Positives = 26/55 (47%)
Frame = +2
Query: 104 VYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAVTKPV 268
+Y E G P+ K+PI PD + + V + + P VS EA++ P+
Sbjct: 678 IYLSPGERYSGDKPPVQAWIKSPINPDELENTLVDVLGQTEPPTLVSTEAISGPL 732
>UniRef50_A0GGU8 Cluster: Putative uncharacterized protein; n=1;
Burkholderia phytofirmans PsJN|Rep: Putative
uncharacterized protein - Burkholderia phytofirmans PsJN
Length = 753
Score = 32.7 bits (71), Expect = 8.5
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = -2
Query: 385 RTYVHHDTCYRRHPDRTYEYHHHGHAEFGRQ 293
R + HHD C R R ++HHHGH GR+
Sbjct: 478 RDHHHHDRCLRDR--RRRDHHHHGHRLRGRR 506
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 646,417,639
Number of Sequences: 1657284
Number of extensions: 13175835
Number of successful extensions: 43235
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 39816
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42753
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 52892566912
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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