Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060740.seq
         (680 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ302654-1|CAC35519.1|  168|Anopheles gambiae gSG2-like protein ...    27   0.72 
AY496420-1|AAS80137.1|  447|Anopheles gambiae bacteria responsiv...    24   3.9  
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    23   6.7  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           23   6.7  
AY994095-1|AAX86008.1|  144|Anopheles gambiae unknown protein.         23   6.7  
AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger transc...    23   8.9  
AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein hom...    23   8.9  

>AJ302654-1|CAC35519.1|  168|Anopheles gambiae gSG2-like protein
           protein.
          Length = 168

 Score = 26.6 bits (56), Expect = 0.72
 Identities = 17/44 (38%), Positives = 25/44 (56%)
 Frame = +1

Query: 244 QGGCHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGG 375
           QGG  Q    S+G+G+    +P + G G  +SG  +FGN  +GG
Sbjct: 121 QGG-GQGGIPSFGSGQQNGGVPFL-GNGQGQSGFPSFGNGQQGG 162


>AY496420-1|AAS80137.1|  447|Anopheles gambiae bacteria responsive
           protein 1 protein.
          Length = 447

 Score = 24.2 bits (50), Expect = 3.9
 Identities = 14/48 (29%), Positives = 19/48 (39%)
 Frame = +1

Query: 130 AGCSQAPPVRVQGAHPSGPGQ*CSRFYVQELEAALLREQGGCHQTSAE 273
           +G +  PP+   G  P+GP      FY      A L   G  +   AE
Sbjct: 317 SGITGVPPIPADGPSPAGPYTNVPGFYSFGEVCAKLPNPGNANLKGAE 364


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = -2

Query: 355 RRHPDRTYEYHHHGH 311
           ++HP  +  +HHH H
Sbjct: 175 QQHPGHSQHHHHHHH 189


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 10/30 (33%), Positives = 14/30 (46%)
 Frame = -2

Query: 325 HHHGHAEFGRQHVQYPMIQHWFGDSLLAHA 236
           HH  H   G+ H Q+       G SL++ A
Sbjct: 649 HHQAHQHQGQHHAQHHSNGTHHGPSLMSSA 678


>AY994095-1|AAX86008.1|  144|Anopheles gambiae unknown protein.
          Length = 144

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 18/64 (28%), Positives = 29/64 (45%)
 Frame = -2

Query: 346 PDRTYEYHHHGHAEFGRQHVQYPMIQHWFGDSLLAHAVGLPRVLGHRNVNIIDQVRTDGR 167
           PD+T  Y  +G  E   +HV+  + +    D+  A  V L  V+G    +   ++   GR
Sbjct: 48  PDKTAAYVAYGGQETLVEHVEVLVHKQLIWDTASAGQVPLGAVVGGHTSD--GEILYVGR 105

Query: 166 LEHE 155
             HE
Sbjct: 106 AYHE 109


>AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger
           transcription factor pannier protein.
          Length = 537

 Score = 23.0 bits (47), Expect = 8.9
 Identities = 10/32 (31%), Positives = 16/32 (50%), Gaps = 2/32 (6%)
 Frame = -2

Query: 358 YRRHPDRTYEYHHH--GHAEFGRQHVQYPMIQ 269
           +  HP   + +HHH    A+    H Q+ +IQ
Sbjct: 498 HHAHPHHHHHHHHHHPTAADLAGYHHQHNVIQ 529


>AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein
           homolog protein.
          Length = 394

 Score = 23.0 bits (47), Expect = 8.9
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +1

Query: 124 DGAGCSQAPPVRVQGAHPSGPG 189
           DG     +PP+ V G+  S PG
Sbjct: 153 DGLHSIPSPPITVSGSDMSSPG 174


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 660,595
Number of Sequences: 2352
Number of extensions: 12949
Number of successful extensions: 37
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68577420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)