Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060740.seq
(680 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X13382-1|CAA31759.1| 407|Drosophila melanogaster protein ( Dros... 123 3e-28
BT025959-1|ABG02203.1| 233|Drosophila melanogaster IP15855p pro... 123 3e-28
AY069485-1|AAL39630.1| 401|Drosophila melanogaster LD21756p pro... 123 3e-28
AE014297-4196|AAG22173.1| 401|Drosophila melanogaster CG5502-PA... 123 3e-28
X06881-1|CAA29998.1| 123|Drosophila melanogaster protein ( Dros... 122 3e-28
BT004470-1|AAO42634.1| 1248|Drosophila melanogaster SD07139p pro... 31 1.9
AY113210-1|AAM29215.1| 872|Drosophila melanogaster AT06220p pro... 31 1.9
AE014297-2960|AAF55869.3| 1251|Drosophila melanogaster CG5874-PA... 31 1.9
AE014296-2188|AAF49882.2| 271|Drosophila melanogaster CG17666-P... 31 1.9
AE014296-2187|AAN11857.1| 872|Drosophila melanogaster CG17666-P... 31 1.9
BT021357-1|AAX33505.1| 1953|Drosophila melanogaster LP14866p pro... 29 4.5
AE014298-1786|AAF48179.2| 2528|Drosophila melanogaster CG32654-P... 29 4.5
AY122259-1|AAM52771.1| 2176|Drosophila melanogaster SD09011p pro... 29 5.9
AL009192-2|CAA15686.1| 2342|Drosophila melanogaster EG:133E12.4 ... 29 5.9
AF242291-1|AAF63753.1| 2362|Drosophila melanogaster nuclear prot... 29 5.9
AE014298-308|AAF45704.2| 2301|Drosophila melanogaster CG4399-PB ... 29 5.9
AE014296-2946|AAF49313.1| 797|Drosophila melanogaster CG6064-PA... 29 5.9
BT010242-1|AAQ23560.1| 498|Drosophila melanogaster RE48016p pro... 29 7.8
AE013599-2858|AAF57577.1| 537|Drosophila melanogaster CG9811-PA... 29 7.8
>X13382-1|CAA31759.1| 407|Drosophila melanogaster protein (
Drosophila melanogastermRNA for put. ribosomal protein
L1. ).
Length = 407
Score = 123 bits (296), Expect = 3e-28
Identities = 59/103 (57%), Positives = 66/103 (64%)
Frame = +1
Query: 223 EAALLREQGGCHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPW 402
+A + E G HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +
Sbjct: 53 QAYAVSELAG-HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTF 111
Query: 403 RRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIMKRFPSFP 531
RRWH Q++GH++ FP
Sbjct: 112 RRWHRKVNVNQRRYALVSAIAASGVPALVQSKGHVIDGVSEFP 154
Score = 84.6 bits (200), Expect = 1e-16
Identities = 39/55 (70%), Positives = 46/55 (83%)
Frame = +3
Query: 516 IPELPLVVADKVQEXNKTKQAVIFLRRLKAWSDILKVYXSQRLRAGKGKMRNRRR 680
+ E PLVV+D+VQ+ KTKQAVIFLRRLK W+DI KVY SQR RAG+G MR+RRR
Sbjct: 150 VSEFPLVVSDEVQKVQKTKQAVIFLRRLKIWADIQKVYKSQRFRAGRGTMRDRRR 204
Score = 72.5 bits (170), Expect = 5e-13
Identities = 36/61 (59%), Positives = 45/61 (73%)
Frame = +2
Query: 71 MSLSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKE 250
MSL ARPLVSVY+EK+E + LP VFKAPIRPD+VN+VH + +N+RQ Y VS+
Sbjct: 1 MSLGNARPLVSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSEL 60
Query: 251 A 253
A
Sbjct: 61 A 61
>BT025959-1|ABG02203.1| 233|Drosophila melanogaster IP15855p
protein.
Length = 233
Score = 123 bits (296), Expect = 3e-28
Identities = 59/103 (57%), Positives = 66/103 (64%)
Frame = +1
Query: 223 EAALLREQGGCHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPW 402
+A + E G HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +
Sbjct: 53 QAYAVSELAG-HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTF 111
Query: 403 RRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIMKRFPSFP 531
RRWH Q++GH++ FP
Sbjct: 112 RRWHRKVNVNQRRYALVSAIAASGVPALVQSKGHVIDGVSEFP 154
Score = 84.6 bits (200), Expect = 1e-16
Identities = 39/55 (70%), Positives = 46/55 (83%)
Frame = +3
Query: 516 IPELPLVVADKVQEXNKTKQAVIFLRRLKAWSDILKVYXSQRLRAGKGKMRNRRR 680
+ E PLVV+D+VQ+ KTKQAVIFLRRLK W+DI KVY SQR RAG+G MR+RRR
Sbjct: 150 VSEFPLVVSDEVQKVQKTKQAVIFLRRLKIWADIQKVYKSQRFRAGRGTMRDRRR 204
Score = 72.5 bits (170), Expect = 5e-13
Identities = 36/61 (59%), Positives = 45/61 (73%)
Frame = +2
Query: 71 MSLSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKE 250
MSL ARPLVSVY+EK+E + LP VFKAPIRPD+VN+VH + +N+RQ Y VS+
Sbjct: 1 MSLGNARPLVSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSEL 60
Query: 251 A 253
A
Sbjct: 61 A 61
>AY069485-1|AAL39630.1| 401|Drosophila melanogaster LD21756p
protein.
Length = 401
Score = 123 bits (296), Expect = 3e-28
Identities = 59/103 (57%), Positives = 66/103 (64%)
Frame = +1
Query: 223 EAALLREQGGCHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPW 402
+A + E G HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +
Sbjct: 53 QAYAVSELAG-HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTF 111
Query: 403 RRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIMKRFPSFP 531
RRWH Q++GH++ FP
Sbjct: 112 RRWHRKVNVNQRRYALVSAIAASGVPALVQSKGHVIDGVSEFP 154
Score = 84.6 bits (200), Expect = 1e-16
Identities = 39/55 (70%), Positives = 46/55 (83%)
Frame = +3
Query: 516 IPELPLVVADKVQEXNKTKQAVIFLRRLKAWSDILKVYXSQRLRAGKGKMRNRRR 680
+ E PLVV+D+VQ+ KTKQAVIFLRRLK W+DI KVY SQR RAG+G MR+RRR
Sbjct: 150 VSEFPLVVSDEVQKVQKTKQAVIFLRRLKIWADIQKVYKSQRFRAGRGTMRDRRR 204
Score = 72.5 bits (170), Expect = 5e-13
Identities = 36/61 (59%), Positives = 45/61 (73%)
Frame = +2
Query: 71 MSLSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKE 250
MSL ARPLVSVY+EK+E + LP VFKAPIRPD+VN+VH + +N+RQ Y VS+
Sbjct: 1 MSLGNARPLVSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSEL 60
Query: 251 A 253
A
Sbjct: 61 A 61
>AE014297-4196|AAG22173.1| 401|Drosophila melanogaster CG5502-PA
protein.
Length = 401
Score = 123 bits (296), Expect = 3e-28
Identities = 59/103 (57%), Positives = 66/103 (64%)
Frame = +1
Query: 223 EAALLREQGGCHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPW 402
+A + E G HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +
Sbjct: 53 QAYAVSELAG-HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTF 111
Query: 403 RRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIMKRFPSFP 531
RRWH Q++GH++ FP
Sbjct: 112 RRWHRKVNVNQRRYALVSAIAASGVPALVQSKGHVIDGVSEFP 154
Score = 84.6 bits (200), Expect = 1e-16
Identities = 39/55 (70%), Positives = 46/55 (83%)
Frame = +3
Query: 516 IPELPLVVADKVQEXNKTKQAVIFLRRLKAWSDILKVYXSQRLRAGKGKMRNRRR 680
+ E PLVV+D+VQ+ KTKQAVIFLRRLK W+DI KVY SQR RAG+G MR+RRR
Sbjct: 150 VSEFPLVVSDEVQKVQKTKQAVIFLRRLKIWADIQKVYKSQRFRAGRGTMRDRRR 204
Score = 72.5 bits (170), Expect = 5e-13
Identities = 36/61 (59%), Positives = 45/61 (73%)
Frame = +2
Query: 71 MSLSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKE 250
MSL ARPLVSVY+EK+E + LP VFKAPIRPD+VN+VH + +N+RQ Y VS+
Sbjct: 1 MSLGNARPLVSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSEL 60
Query: 251 A 253
A
Sbjct: 61 A 61
>X06881-1|CAA29998.1| 123|Drosophila melanogaster protein (
Drosophila gene forribosomal protein L1 fragment. ).
Length = 123
Score = 122 bits (295), Expect = 3e-28
Identities = 56/92 (60%), Positives = 61/92 (66%)
Frame = +1
Query: 256 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXX 435
HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 1 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRRVNVNQ 60
Query: 436 XXXXXXXXXXXXXXXXXXQARGHIMKRFPSFP 531
Q++GH++ FP
Sbjct: 61 RRYALVSAIAASGVPALVQSKGHVIDGVSEFP 92
Score = 55.6 bits (128), Expect = 6e-08
Identities = 25/36 (69%), Positives = 30/36 (83%)
Frame = +3
Query: 516 IPELPLVVADKVQEXNKTKQAVIFLRRLKAWSDILK 623
+ E PLVV+D+VQ+ KTKQAVIFLRRLK W+DI K
Sbjct: 88 VSEFPLVVSDEVQKVQKTKQAVIFLRRLKIWADIQK 123
>BT004470-1|AAO42634.1| 1248|Drosophila melanogaster SD07139p protein.
Length = 1248
Score = 30.7 bits (66), Expect = 1.9
Identities = 17/57 (29%), Positives = 26/57 (45%)
Frame = +2
Query: 401 GGVGTVASTSDSGERPWRQPLLLPASQRSFRLEDTL*KDSRASLGCSRQSPRXQQDQ 571
GG+ T+ +RP +QP L+ + T+ S + S+Q PR QQ Q
Sbjct: 1025 GGLTTLPQGLTLIQRPGQQPQLVQVQAAPGSTQRTIITQSNTAAAASQQQPRQQQQQ 1081
>AY113210-1|AAM29215.1| 872|Drosophila melanogaster AT06220p
protein.
Length = 872
Score = 30.7 bits (66), Expect = 1.9
Identities = 11/22 (50%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = +3
Query: 288 TCCRP-NSACPWWWYS*VRSGC 350
TCC P ++ CPW WY +GC
Sbjct: 718 TCCMPCSNQCPWSWYYNPCTGC 739
>AE014297-2960|AAF55869.3| 1251|Drosophila melanogaster CG5874-PA
protein.
Length = 1251
Score = 30.7 bits (66), Expect = 1.9
Identities = 17/57 (29%), Positives = 26/57 (45%)
Frame = +2
Query: 401 GGVGTVASTSDSGERPWRQPLLLPASQRSFRLEDTL*KDSRASLGCSRQSPRXQQDQ 571
GG+ T+ +RP +QP L+ + T+ S + S+Q PR QQ Q
Sbjct: 1028 GGLTTLPQGLTLIQRPGQQPQLVQVQAAPGSTQRTIITQSNTAAAASQQQPRQQQQQ 1084
>AE014296-2188|AAF49882.2| 271|Drosophila melanogaster CG17666-PB,
isoform B protein.
Length = 271
Score = 30.7 bits (66), Expect = 1.9
Identities = 11/22 (50%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = +3
Query: 288 TCCRP-NSACPWWWYS*VRSGC 350
TCC P ++ CPW WY +GC
Sbjct: 117 TCCMPCSNQCPWSWYYNPCTGC 138
>AE014296-2187|AAN11857.1| 872|Drosophila melanogaster CG17666-PA,
isoform A protein.
Length = 872
Score = 30.7 bits (66), Expect = 1.9
Identities = 11/22 (50%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = +3
Query: 288 TCCRP-NSACPWWWYS*VRSGC 350
TCC P ++ CPW WY +GC
Sbjct: 718 TCCMPCSNQCPWSWYYNPCTGC 739
>BT021357-1|AAX33505.1| 1953|Drosophila melanogaster LP14866p
protein.
Length = 1953
Score = 29.5 bits (63), Expect = 4.5
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = +1
Query: 76 SIGSPTFSVGVFREE*DGAGCSQAPPVRVQG--AHPSGPG 189
++GSP ++VG G G S APP V AH +G G
Sbjct: 287 AVGSPIYAVGASSAHSAGVGASPAPPTGVVAPPAHLAGIG 326
>AE014298-1786|AAF48179.2| 2528|Drosophila melanogaster CG32654-PC
protein.
Length = 2528
Score = 29.5 bits (63), Expect = 4.5
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = +1
Query: 76 SIGSPTFSVGVFREE*DGAGCSQAPPVRVQG--AHPSGPG 189
++GSP ++VG G G S APP V AH +G G
Sbjct: 287 AVGSPIYAVGASSAHSAGVGASPAPPTGVVAPPAHLAGIG 326
>AY122259-1|AAM52771.1| 2176|Drosophila melanogaster SD09011p protein.
Length = 2176
Score = 29.1 bits (62), Expect = 5.9
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +1
Query: 244 QGGCHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGG 375
+GG T ES GT + V ++ R GG SG G + GG
Sbjct: 918 RGGGSATHVESSGTLKTVIKLNRSSNGGVSGSGGLPTGTVIHGG 961
>AL009192-2|CAA15686.1| 2342|Drosophila melanogaster EG:133E12.4
protein.
Length = 2342
Score = 29.1 bits (62), Expect = 5.9
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +1
Query: 244 QGGCHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGG 375
+GG T ES GT + V ++ R GG SG G + GG
Sbjct: 1042 RGGGSATHVESSGTLKTVIKLNRSSNGGVSGSGGLPTGTVIHGG 1085
>AF242291-1|AAF63753.1| 2362|Drosophila melanogaster nuclear protein
EAST protein.
Length = 2362
Score = 29.1 bits (62), Expect = 5.9
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +1
Query: 244 QGGCHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGG 375
+GG T ES GT + V ++ R GG SG G + GG
Sbjct: 1095 RGGGSATHVESSGTLKTVIKLNRSSNGGVSGSGGLPTGTVIHGG 1138
>AE014298-308|AAF45704.2| 2301|Drosophila melanogaster CG4399-PB
protein.
Length = 2301
Score = 29.1 bits (62), Expect = 5.9
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +1
Query: 244 QGGCHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGG 375
+GG T ES GT + V ++ R GG SG G + GG
Sbjct: 1042 RGGGSATHVESSGTLKTVIKLNRSSNGGVSGSGGLPTGTVIHGG 1085
>AE014296-2946|AAF49313.1| 797|Drosophila melanogaster CG6064-PA
protein.
Length = 797
Score = 29.1 bits (62), Expect = 5.9
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = -3
Query: 516 SFHNVSSSLNERWDAGSSNGCRQGRSPLSEVDATVPTPPG 397
S HN S++LN + SS+G + PL + VP+P G
Sbjct: 585 STHNGSTNLNGAGNNNSSSGGGTAQDPLGITTSPVPSPLG 624
>BT010242-1|AAQ23560.1| 498|Drosophila melanogaster RE48016p
protein.
Length = 498
Score = 28.7 bits (61), Expect = 7.8
Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = -3
Query: 534 PREARESFHNVSSSLNERWDAGSSN-GCRQGRSPLSEVDATVPTPPG 397
P ++R+ F S ++R N GC +PL + V TPPG
Sbjct: 409 PEKSRDLFRKRSIRKSKRRACSPLNAGCLNANTPLGPLGEAVATPPG 455
>AE013599-2858|AAF57577.1| 537|Drosophila melanogaster CG9811-PA
protein.
Length = 537
Score = 28.7 bits (61), Expect = 7.8
Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = -3
Query: 534 PREARESFHNVSSSLNERWDAGSSN-GCRQGRSPLSEVDATVPTPPG 397
P ++R+ F S ++R N GC +PL + V TPPG
Sbjct: 448 PEKSRDLFRKRSIRKSKRRACSPLNAGCLNANTPLGPLGEAVATPPG 494
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,410,439
Number of Sequences: 53049
Number of extensions: 643277
Number of successful extensions: 3742
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 2645
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3605
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2971922400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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