Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060738.seq
         (673 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-472|AAF47658.3| 1504|Drosophila melanogaster CG16973-PA...    34   0.15 
AE014296-471|AAS64942.1| 1200|Drosophila melanogaster CG16973-PB...    34   0.15 
AY058673-1|AAL13902.1|  691|Drosophila melanogaster LD38352p pro...    32   0.82 
AE014297-3228|AAF56058.1|  691|Drosophila melanogaster CG4771-PA...    32   0.82 
BT011116-1|AAR82783.1|  939|Drosophila melanogaster LD16337p pro...    30   2.5  
AE014296-475|AAS64945.1| 1102|Drosophila melanogaster CG16973-PD...    30   2.5  
AE014296-474|AAS64944.1| 1102|Drosophila melanogaster CG16973-PC...    30   2.5  
AE014296-473|AAS64943.1| 1042|Drosophila melanogaster CG16973-PE...    30   2.5  
AY118712-1|AAM50572.1| 1266|Drosophila melanogaster AT25667p pro...    29   7.6  

>AE014296-472|AAF47658.3| 1504|Drosophila melanogaster CG16973-PA,
           isoform A protein.
          Length = 1504

 Score = 34.3 bits (75), Expect = 0.15
 Identities = 21/54 (38%), Positives = 30/54 (55%)
 Frame = +2

Query: 221 RSTQTSLRPGLPSAGPAILPFNTEPTPETAGLGQDTGVRAHPEARPPCHSSDSS 382
           R++Q + +P LP   P       EP P+TA  GQ +  +A PEA PP ++  SS
Sbjct: 493 RNSQNNFKPSLPPRRP-------EPQPQTAAGGQGSQQQAQPEA-PPRNNRQSS 538


>AE014296-471|AAS64942.1| 1200|Drosophila melanogaster CG16973-PB,
           isoform B protein.
          Length = 1200

 Score = 34.3 bits (75), Expect = 0.15
 Identities = 21/54 (38%), Positives = 30/54 (55%)
 Frame = +2

Query: 221 RSTQTSLRPGLPSAGPAILPFNTEPTPETAGLGQDTGVRAHPEARPPCHSSDSS 382
           R++Q + +P LP   P       EP P+TA  GQ +  +A PEA PP ++  SS
Sbjct: 493 RNSQNNFKPSLPPRRP-------EPQPQTAAGGQGSQQQAQPEA-PPRNNRQSS 538


>AY058673-1|AAL13902.1|  691|Drosophila melanogaster LD38352p
           protein.
          Length = 691

 Score = 31.9 bits (69), Expect = 0.82
 Identities = 21/57 (36%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
 Frame = +2

Query: 233 TSLRPGLPSAGPAILPFNTEPTPETAGLGQDTGVRAHPE-ARPPCHSSDSSQFGLLL 400
           TS  P +P+ GPAI      P      +   TG + HPE  RPP  + D  + G LL
Sbjct: 139 TSTEP-MPTPGPAISATERTPVNHNREVPISTGGQNHPEFFRPPLVTKDDYKRGSLL 194


>AE014297-3228|AAF56058.1|  691|Drosophila melanogaster CG4771-PA
           protein.
          Length = 691

 Score = 31.9 bits (69), Expect = 0.82
 Identities = 21/57 (36%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
 Frame = +2

Query: 233 TSLRPGLPSAGPAILPFNTEPTPETAGLGQDTGVRAHPE-ARPPCHSSDSSQFGLLL 400
           TS  P +P+ GPAI      P      +   TG + HPE  RPP  + D  + G LL
Sbjct: 139 TSTEP-MPTPGPAISATERTPVNHNREVPISTGGQNHPEFFRPPLVTKDDYKRGSLL 194


>BT011116-1|AAR82783.1|  939|Drosophila melanogaster LD16337p
           protein.
          Length = 939

 Score = 30.3 bits (65), Expect = 2.5
 Identities = 15/34 (44%), Positives = 22/34 (64%)
 Frame = +2

Query: 281 FNTEPTPETAGLGQDTGVRAHPEARPPCHSSDSS 382
           F+ +P P+TA  GQ +  +A PEA PP ++  SS
Sbjct: 363 FSQQPQPQTAAGGQGSQQQAQPEA-PPRNNRQSS 395


>AE014296-475|AAS64945.1| 1102|Drosophila melanogaster CG16973-PD,
           isoform D protein.
          Length = 1102

 Score = 30.3 bits (65), Expect = 2.5
 Identities = 15/34 (44%), Positives = 22/34 (64%)
 Frame = +2

Query: 281 FNTEPTPETAGLGQDTGVRAHPEARPPCHSSDSS 382
           F+ +P P+TA  GQ +  +A PEA PP ++  SS
Sbjct: 526 FSQQPQPQTAAGGQGSQQQAQPEA-PPRNNRQSS 558


>AE014296-474|AAS64944.1| 1102|Drosophila melanogaster CG16973-PC,
           isoform C protein.
          Length = 1102

 Score = 30.3 bits (65), Expect = 2.5
 Identities = 15/34 (44%), Positives = 22/34 (64%)
 Frame = +2

Query: 281 FNTEPTPETAGLGQDTGVRAHPEARPPCHSSDSS 382
           F+ +P P+TA  GQ +  +A PEA PP ++  SS
Sbjct: 526 FSQQPQPQTAAGGQGSQQQAQPEA-PPRNNRQSS 558


>AE014296-473|AAS64943.1| 1042|Drosophila melanogaster CG16973-PE,
           isoform E protein.
          Length = 1042

 Score = 30.3 bits (65), Expect = 2.5
 Identities = 15/34 (44%), Positives = 22/34 (64%)
 Frame = +2

Query: 281 FNTEPTPETAGLGQDTGVRAHPEARPPCHSSDSS 382
           F+ +P P+TA  GQ +  +A PEA PP ++  SS
Sbjct: 526 FSQQPQPQTAAGGQGSQQQAQPEA-PPRNNRQSS 558


>AY118712-1|AAM50572.1| 1266|Drosophila melanogaster AT25667p
           protein.
          Length = 1266

 Score = 28.7 bits (61), Expect = 7.6
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = -3

Query: 374 PKSDKAASPPGAPVHQYPVPVLPSP 300
           PK+    SPP +PV +  +  LPSP
Sbjct: 545 PKASSQTSPPPSPVKEISMSALPSP 569


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,703,738
Number of Sequences: 53049
Number of extensions: 682380
Number of successful extensions: 2469
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2271
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2469
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2910007350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)