Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060737.seq
         (685 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    25   0.44 
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    23   3.1  
AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    22   4.1  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    22   4.1  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    22   5.4  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    21   7.1  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    21   9.4  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    21   9.4  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 25.4 bits (53), Expect = 0.44
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = +3

Query: 96   PKEWHKDANKSPDHDQ 143
            PK W  D NK PD D+
Sbjct: 2445 PKCWQVDCNKGPDSDK 2460



 Score = 23.0 bits (47), Expect = 2.3
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +3

Query: 96   PKEWHKDANKSPDHDQ 143
            PK W  D  K PD D+
Sbjct: 1522 PKCWQVDCKKGPDSDK 1537



 Score = 22.2 bits (45), Expect = 4.1
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +3

Query: 96   PKEWHKDANKSPDHDQ 143
            PK W  D NK P  D+
Sbjct: 1947 PKCWQVDCNKGPASDK 1962



 Score = 21.0 bits (42), Expect = 9.4
 Identities = 6/9 (66%), Positives = 6/9 (66%)
 Frame = -3

Query: 650  CCGYPHCLW 624
            C  Y HCLW
Sbjct: 1291 CTRYLHCLW 1299


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
            protein.
          Length = 1156

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 12/28 (42%), Positives = 13/28 (46%)
 Frame = -2

Query: 435  GIVSQSVNVPEINTCFPPPSHLKTVGNT 352
            G  S S  VP   T  PPPS     G+T
Sbjct: 1096 GSSSSSEGVPLKGTAVPPPSGSSGPGST 1123


>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +1

Query: 52  YNHLKIKWGMPEVTNPKNGIKML 120
           +N L I W  PE  + +N I +L
Sbjct: 138 FNGLDIDWEYPEAKDKENFITLL 160


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 12/42 (28%), Positives = 23/42 (54%)
 Frame = -2

Query: 450 CDFTMGIVSQSVNVPEINTCFPPPSHLKTVGNTLISSTILLP 325
           CD T+G+++  +N P         S +++  N + +S +LLP
Sbjct: 20  CDQTIGLITFDINTPSFKL-----SKIRSFLN-ITASAVLLP 55


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 11/22 (50%), Positives = 12/22 (54%)
 Frame = -2

Query: 426 SQSVNVPEINTCFPPPSHLKTV 361
           S S NVP +     PPSH  TV
Sbjct: 109 SPSGNVPPLTPSPGPPSHPYTV 130


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +3

Query: 357 YQQFSNGKEVENKYLFLEHLQ 419
           YQQ SN + V+N   F +  Q
Sbjct: 501 YQQLSNYRNVDNSAKFKDGFQ 521


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 9/32 (28%), Positives = 16/32 (50%)
 Frame = +2

Query: 260 KAVPESDIEYTEQRERSNTLTDGSKIVDDIKV 355
           K +    I+      ++ T+TD  K  +DIK+
Sbjct: 257 KIIRNDFIDLLSNLRKTETITDSYKFDNDIKM 288


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 7/26 (26%), Positives = 14/26 (53%)
 Frame = +1

Query: 391 TSIYFWNIYRLGNYSHGKITW*FCYN 468
           T++ FW   ++ N ++   TW   +N
Sbjct: 252 TNLLFWEFDQIVNVAYRMETWNVVFN 277


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,487
Number of Sequences: 336
Number of extensions: 4098
Number of successful extensions: 15
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17906060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)