Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060736.seq
         (677 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    28   0.071
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    28   0.071
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    28   0.071
AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.           24   1.2  
AY222546-1|AAP69221.1|  135|Apis mellifera wingless protein.           24   1.2  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        22   4.7  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        22   4.7  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        22   4.7  
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    22   4.7  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          22   4.7  

>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 28.3 bits (60), Expect = 0.071
 Identities = 24/59 (40%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
 Frame = -3

Query: 339 SGRKTELSA*VEEKSTFPQTIETTVDKSLSGLRRAPVTYMAIKGI-IIC-LKFFLFEVI 169
           S R+T  S      +T  Q IE     SLS  RRA  T   I G+ ++C L FFL  VI
Sbjct: 291 SSRRTTGSRAAATTTTVYQFIEERQRISLSKERRAARTLGVIMGVFVVCWLPFFLMYVI 349


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 28.3 bits (60), Expect = 0.071
 Identities = 24/59 (40%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
 Frame = -3

Query: 339 SGRKTELSA*VEEKSTFPQTIETTVDKSLSGLRRAPVTYMAIKGI-IIC-LKFFLFEVI 169
           S R+T  S      +T  Q IE     SLS  RRA  T   I G+ ++C L FFL  VI
Sbjct: 291 SSRRTTGSRAAATTTTVYQFIEERQRISLSKERRAARTLGVIMGVFVVCWLPFFLMYVI 349


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 28.3 bits (60), Expect = 0.071
 Identities = 24/59 (40%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
 Frame = -3

Query: 339 SGRKTELSA*VEEKSTFPQTIETTVDKSLSGLRRAPVTYMAIKGI-IIC-LKFFLFEVI 169
           S R+T  S      +T  Q IE     SLS  RRA  T   I G+ ++C L FFL  VI
Sbjct: 291 SSRRTTGSRAAATTTTVYQFIEERQRISLSKERRAARTLGVIMGVFVVCWLPFFLMYVI 349


>AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.
          Length = 136

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +2

Query: 380 GRKCNFSSLGTDKC 421
           GR+CN +S+G D C
Sbjct: 100 GRQCNDTSIGVDGC 113


>AY222546-1|AAP69221.1|  135|Apis mellifera wingless protein.
          Length = 135

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +2

Query: 380 GRKCNFSSLGTDKC 421
           GR+CN +S+G D C
Sbjct: 101 GRQCNDTSIGVDGC 114


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -2

Query: 406 QGGKVTLSSLYSGSNSLTFFPV 341
           +GGK  LS L  G   + F P+
Sbjct: 574 RGGKGALSCLLDGKGDVAFVPL 595


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -2

Query: 406 QGGKVTLSSLYSGSNSLTFFPV 341
           +GGK  LS L  G   + F P+
Sbjct: 574 RGGKGALSCLLDGKGDVAFVPL 595


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -2

Query: 406 QGGKVTLSSLYSGSNSLTFFPV 341
           +GGK  LS L  G   + F P+
Sbjct: 574 RGGKGALSCLLDGKGDVAFVPL 595


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 11/28 (39%), Positives = 13/28 (46%)
 Frame = +1

Query: 325 GFPPAVQGRKSNYCFRCTGKKV*LFLPG 408
           G PP  Q R S+    C+G  V  F  G
Sbjct: 276 GSPPVKQHRSSSASTTCSGHTVRCFTGG 303


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 13/44 (29%), Positives = 18/44 (40%)
 Frame = +3

Query: 294 SIFLLPTPKVRFSSRCTGKKVKLLLPLYREESVTFPPWVLTSAH 425
           S+ L   P+   + R    K+K   P Y+    TF P    S H
Sbjct: 132 SVSLSSPPREPGTPRINFTKLKRHHPRYKRPRTTFEPRATDSRH 175


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 183,674
Number of Sequences: 438
Number of extensions: 3857
Number of successful extensions: 15
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20586735
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)