Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060735.seq
         (685 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     29   0.047
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           23   3.1  
AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan oxyge...    22   4.1  
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    22   4.1  
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    22   4.1  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    21   7.1  
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    21   7.1  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    21   7.1  
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    21   7.1  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    21   7.1  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    21   7.1  
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    21   7.1  
AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax pr...    21   7.1  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    21   7.1  
DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory pro...    21   9.4  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   9.4  

>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 28.7 bits (61), Expect = 0.047
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = +1

Query: 241 CDPKRPSEASKPDAPPTPLSSDPTAHGPIL 330
           CDP RP    +     +P +  PT H P+L
Sbjct: 185 CDPDRPLPLDQKARDLSPRNGSPTDHSPVL 214


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 18/54 (33%), Positives = 22/54 (40%), Gaps = 3/54 (5%)
 Frame = +2

Query: 131 QVQNQAYLTPAH---PETPPSPSKQEIKSGETLATGFPNVATLSAPRKPRNQTP 283
           Q+Q Q  L P H   P T   PS     +  T +TG  +   LS    P   TP
Sbjct: 75  QLQPQR-LAPTHLQSPNTQTHPSASCKYADSTSSTGVASPQDLSTNGAPPRSTP 127


>AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 228

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = -3

Query: 311 VGSELKGVGGASGFEASEGRLGSQH 237
           +GS   G GG+SG++     L  ++
Sbjct: 157 IGSSQLGTGGSSGYQYLRSTLSDRY 181


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = -3

Query: 311 VGSELKGVGGASGFEASEGRLGSQH 237
           +GS   G GG+SG++     L  ++
Sbjct: 317 IGSSQLGTGGSSGYQYLRSTLSDRY 341


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = -3

Query: 311 VGSELKGVGGASGFEASEGRLGSQH 237
           +GS   G GG+SG++     L  ++
Sbjct: 317 IGSSQLGTGGSSGYQYLRSTLSDRY 341


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +1

Query: 250 KRPSEASKPDAPPTPLSSDP 309
           +R +  S  +APP P  S+P
Sbjct: 446 QRTTTVSTTEAPPAPAVSNP 465


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 17/61 (27%), Positives = 21/61 (34%)
 Frame = +2

Query: 101 QPSSNVSKHHQVQNQAYLTPAHPETPPSPSKQEIKSGETLATGFPNVATLSAPRKPRNQT 280
           QP+       Q Q  A      P T   PS     +  T +TG  +   LS    P   T
Sbjct: 67  QPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVASPQDLSTNGAPPRST 126

Query: 281 P 283
           P
Sbjct: 127 P 127


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 17/61 (27%), Positives = 21/61 (34%)
 Frame = +2

Query: 101 QPSSNVSKHHQVQNQAYLTPAHPETPPSPSKQEIKSGETLATGFPNVATLSAPRKPRNQT 280
           QP+       Q Q  A      P T   PS     +  T +TG  +   LS    P   T
Sbjct: 67  QPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVASPQDLSTNGAPPRST 126

Query: 281 P 283
           P
Sbjct: 127 P 127


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 17/61 (27%), Positives = 21/61 (34%)
 Frame = +2

Query: 101 QPSSNVSKHHQVQNQAYLTPAHPETPPSPSKQEIKSGETLATGFPNVATLSAPRKPRNQT 280
           QP+       Q Q  A      P T   PS     +  T +TG  +   LS    P   T
Sbjct: 67  QPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVASPQDLSTNGAPPRST 126

Query: 281 P 283
           P
Sbjct: 127 P 127


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 17/61 (27%), Positives = 21/61 (34%)
 Frame = +2

Query: 101 QPSSNVSKHHQVQNQAYLTPAHPETPPSPSKQEIKSGETLATGFPNVATLSAPRKPRNQT 280
           QP+       Q Q  A      P T   PS     +  T +TG  +   LS    P   T
Sbjct: 67  QPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVASPQDLSTNGAPPRST 126

Query: 281 P 283
           P
Sbjct: 127 P 127


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 17/61 (27%), Positives = 21/61 (34%)
 Frame = +2

Query: 101 QPSSNVSKHHQVQNQAYLTPAHPETPPSPSKQEIKSGETLATGFPNVATLSAPRKPRNQT 280
           QP+       Q Q  A      P T   PS     +  T +TG  +   LS    P   T
Sbjct: 67  QPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVASPQDLSTNGAPPRST 126

Query: 281 P 283
           P
Sbjct: 127 P 127


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 17/61 (27%), Positives = 21/61 (34%)
 Frame = +2

Query: 101 QPSSNVSKHHQVQNQAYLTPAHPETPPSPSKQEIKSGETLATGFPNVATLSAPRKPRNQT 280
           QP+       Q Q  A      P T   PS     +  T +TG  +   LS    P   T
Sbjct: 23  QPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVASPQDLSTNGAPPRST 82

Query: 281 P 283
           P
Sbjct: 83  P 83


>AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax
           protein.
          Length = 157

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 17/61 (27%), Positives = 21/61 (34%)
 Frame = +2

Query: 101 QPSSNVSKHHQVQNQAYLTPAHPETPPSPSKQEIKSGETLATGFPNVATLSAPRKPRNQT 280
           QP+       Q Q  A      P T   PS     +  T +TG  +   LS    P   T
Sbjct: 67  QPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVASPQDLSTNGAPPRST 126

Query: 281 P 283
           P
Sbjct: 127 P 127


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 17/61 (27%), Positives = 21/61 (34%)
 Frame = +2

Query: 101 QPSSNVSKHHQVQNQAYLTPAHPETPPSPSKQEIKSGETLATGFPNVATLSAPRKPRNQT 280
           QP+       Q Q  A      P T   PS     +  T +TG  +   LS    P   T
Sbjct: 67  QPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVASPQDLSTNGAPPRST 126

Query: 281 P 283
           P
Sbjct: 127 P 127


>DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory
           protein 15 protein.
          Length = 146

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = -1

Query: 532 KGPSRRESGKGCKGEPILAEG*NLRLEQKQQED 434
           KG   +E+ K  KG     +   ++ EQKQ+ED
Sbjct: 48  KGKCTKEAEKLKKGITETMKNGCVKCEQKQKED 80


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 10/36 (27%), Positives = 19/36 (52%)
 Frame = -1

Query: 217 SLTGFYLLFTGAWGCLRMSRCKVRLVLNLMMF*DVR 110
           +++G   + T  W C  M+RCK    +  ++  DV+
Sbjct: 725 AVSGLVYIAT-VWICTLMNRCKFSEFMTKLLEFDVK 759


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,081
Number of Sequences: 336
Number of extensions: 3310
Number of successful extensions: 18
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17906060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)