Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060735.seq
(685 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY260762-1|AAP20225.1| 3567|Homo sapiens zinc finger homeodomain... 41 0.004
AK131399-1|BAD18546.1| 907|Homo sapiens protein ( Homo sapiens ... 41 0.004
AB083343-1|BAE96598.1| 3599|Homo sapiens zinc-finger homeodomain... 41 0.004
BC130440-1|AAI30441.1| 1031|Homo sapiens M-phase phosphoprotein ... 34 0.54
AK023016-1|BAB14359.1| 692|Homo sapiens protein ( Homo sapiens ... 34 0.54
BC012375-1|AAH12375.1| 525|Homo sapiens arylsulfatase G protein. 33 1.3
AY358380-1|AAQ88746.1| 525|Homo sapiens GWLF839 protein. 33 1.3
AB023218-1|BAA76845.2| 551|Homo sapiens KIAA1001 protein protein. 33 1.3
BC117378-1|AAI17379.1| 123|Homo sapiens defensin, beta 118 prot... 30 6.7
AL031650-6|CAI18885.1| 123|Homo sapiens defensin, beta 118 prot... 30 6.7
AK075118-1|BAC11413.1| 246|Homo sapiens protein ( Homo sapiens ... 30 6.7
AF529415-1|AAQ09524.1| 123|Homo sapiens beta-defensin protein. 30 6.7
AF347073-1|AAL27987.1| 123|Homo sapiens ESC42 protein. 30 6.7
U29175-1|AAB40977.1| 1647|Homo sapiens transcriptional activator... 30 8.8
D26156-1|BAA05143.1| 1647|Homo sapiens transcriptional activator... 30 8.8
BC150298-1|AAI50299.1| 1647|Homo sapiens SWI/SNF related, matrix... 30 8.8
AF254822-2|AAG24789.1| 1647|Homo sapiens SMARCA4 isoform 1 protein. 30 8.8
AF254822-1|AAG24790.1| 1679|Homo sapiens SMARCA4 isoform 2 protein. 30 8.8
>AY260762-1|AAP20225.1| 3567|Homo sapiens zinc finger homeodomain 4
protein protein.
Length = 3567
Score = 41.1 bits (92), Expect = 0.004
Identities = 35/131 (26%), Positives = 52/131 (39%)
Frame = +1
Query: 127 SSGSKPSVPYTGSS*DTPKPQ*TRDKIR*DSCHRLSKCCDPKRPSEASKPDAPPTPLSSD 306
SSGS S P S PKP+ + + + K DP PS+ +KP P SSD
Sbjct: 2337 SSGSGTSTPLIPS----PKPEPEKTSPKPEYPAEKPKQSDPSPPSQGTKPALPLASTSSD 2392
Query: 307 PTAHGPILPHKELFGISSPDHECTFLNRKRLNVSTLPFPAQPCLLVAFAQASNSTPQRVW 486
P P + P + + R + S P P+ P L ++ NS P ++
Sbjct: 2393 PPQASTAQPQPQ----PQPPKQPQLIGRPP-SASQTPVPSSP-LQISMTSLQNSLPPQLL 2446
Query: 487 AHLCTLFLIPF 519
+ C + F
Sbjct: 2447 QYQCDQCTVAF 2457
>AK131399-1|BAD18546.1| 907|Homo sapiens protein ( Homo sapiens
cDNA FLJ16492 fis, clone CTONG2028758, highly similar
to Mus musculus zfh-4 mRNA for zinc-finger homeodomain
protein 4. ).
Length = 907
Score = 41.1 bits (92), Expect = 0.004
Identities = 35/131 (26%), Positives = 52/131 (39%)
Frame = +1
Query: 127 SSGSKPSVPYTGSS*DTPKPQ*TRDKIR*DSCHRLSKCCDPKRPSEASKPDAPPTPLSSD 306
SSGS S P S PKP+ + + + K DP PS+ +KP P SSD
Sbjct: 73 SSGSGTSTPLIPS----PKPEPEKTSPKPEYPAEKPKQSDPSPPSQGTKPALPLASTSSD 128
Query: 307 PTAHGPILPHKELFGISSPDHECTFLNRKRLNVSTLPFPAQPCLLVAFAQASNSTPQRVW 486
P P + P + + R + S P P+ P L ++ NS P ++
Sbjct: 129 PPQASTAQPQPQ----PQPPKQPQLIGRPP-SASQTPVPSSP-LQISMTSLQNSLPPQLL 182
Query: 487 AHLCTLFLIPF 519
+ C + F
Sbjct: 183 QYQCDQCTVAF 193
>AB083343-1|BAE96598.1| 3599|Homo sapiens zinc-finger homeodomain
protein 4 protein.
Length = 3599
Score = 41.1 bits (92), Expect = 0.004
Identities = 35/131 (26%), Positives = 52/131 (39%)
Frame = +1
Query: 127 SSGSKPSVPYTGSS*DTPKPQ*TRDKIR*DSCHRLSKCCDPKRPSEASKPDAPPTPLSSD 306
SSGS S P S PKP+ + + + K DP PS+ +KP P SSD
Sbjct: 2365 SSGSGTSTPLIPS----PKPEPEKTSPKPEYPAEKPKQSDPSPPSQGTKPALPLASTSSD 2420
Query: 307 PTAHGPILPHKELFGISSPDHECTFLNRKRLNVSTLPFPAQPCLLVAFAQASNSTPQRVW 486
P P + P + + R + S P P+ P L ++ NS P ++
Sbjct: 2421 PPQASTAQPQPQ----PQPPKQPQLIGRPP-SASQTPVPSSP-LQISMTSLQNSLPPQLL 2474
Query: 487 AHLCTLFLIPF 519
+ C + F
Sbjct: 2475 QYQCDQCTVAF 2485
>BC130440-1|AAI30441.1| 1031|Homo sapiens M-phase phosphoprotein 9
protein.
Length = 1031
Score = 33.9 bits (74), Expect = 0.54
Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 2/86 (2%)
Frame = +1
Query: 226 RLSKCCDPKRPSEASKPDAPPTPLSSDPTAHGPILPHKELFGISSPDHECTFLNRKRLNV 405
R +K + + AS P+ PP L+ DPT H + P +++ GI +R +
Sbjct: 267 RENKQLPERNLTSASNPNHPPEVLTLDPTLH--MKPKQQISGIQPHGLPNALDDRISFSP 324
Query: 406 STL--PFPAQPCLLVAFAQASNSTPQ 477
++ P + P + +F+QASN T Q
Sbjct: 325 DSVLEPSMSSPSDIDSFSQASNVTSQ 350
>AK023016-1|BAB14359.1| 692|Homo sapiens protein ( Homo sapiens
cDNA FLJ12954 fis, clone NT2RP2005491, weakly similar to
PARAMYOSIN. ).
Length = 692
Score = 33.9 bits (74), Expect = 0.54
Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 2/86 (2%)
Frame = +1
Query: 226 RLSKCCDPKRPSEASKPDAPPTPLSSDPTAHGPILPHKELFGISSPDHECTFLNRKRLNV 405
R +K + + AS P+ PP L+ DPT H + P +++ GI +R +
Sbjct: 63 RENKQLPERNLTSASNPNHPPEVLTLDPTLH--MKPKQQISGIQPHGLPNALDDRISFSP 120
Query: 406 STL--PFPAQPCLLVAFAQASNSTPQ 477
++ P + P + +F+QASN T Q
Sbjct: 121 DSVLEPSMSSPSDIDSFSQASNVTSQ 146
>BC012375-1|AAH12375.1| 525|Homo sapiens arylsulfatase G protein.
Length = 525
Score = 32.7 bits (71), Expect = 1.3
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Frame = -3
Query: 332 GRMGP*AVGSELKG-VGGASGF-EASEGRLGSQHLESRWQESHRILSLVYW 186
G GP A EL G VG +GF + +G GS ++ W+ HR+ +L YW
Sbjct: 301 GDNGPWAQKCELAGSVGPFTGFWQTRQG--GSPAKQTTWEGGHRVPALAYW 349
>AY358380-1|AAQ88746.1| 525|Homo sapiens GWLF839 protein.
Length = 525
Score = 32.7 bits (71), Expect = 1.3
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Frame = -3
Query: 332 GRMGP*AVGSELKG-VGGASGF-EASEGRLGSQHLESRWQESHRILSLVYW 186
G GP A EL G VG +GF + +G GS ++ W+ HR+ +L YW
Sbjct: 301 GDNGPWAQKCELAGSVGPFTGFWQTRQG--GSPAKQTTWEGGHRVPALAYW 349
>AB023218-1|BAA76845.2| 551|Homo sapiens KIAA1001 protein protein.
Length = 551
Score = 32.7 bits (71), Expect = 1.3
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Frame = -3
Query: 332 GRMGP*AVGSELKG-VGGASGF-EASEGRLGSQHLESRWQESHRILSLVYW 186
G GP A EL G VG +GF + +G GS ++ W+ HR+ +L YW
Sbjct: 327 GDNGPWAQKCELAGSVGPFTGFWQTRQG--GSPAKQTTWEGGHRVPALAYW 375
>BC117378-1|AAI17379.1| 123|Homo sapiens defensin, beta 118
protein.
Length = 123
Score = 30.3 bits (65), Expect = 6.7
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = +1
Query: 214 DSCHRLSKCCDPKRPSEASKPDAPPTPLS 300
D+C L CC P P PTPLS
Sbjct: 46 DTCKNLRACCIPSNEDHRRVPATSPTPLS 74
>AL031650-6|CAI18885.1| 123|Homo sapiens defensin, beta 118
protein.
Length = 123
Score = 30.3 bits (65), Expect = 6.7
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = +1
Query: 214 DSCHRLSKCCDPKRPSEASKPDAPPTPLS 300
D+C L CC P P PTPLS
Sbjct: 46 DTCKNLRACCIPSNEDHRRVPATSPTPLS 74
>AK075118-1|BAC11413.1| 246|Homo sapiens protein ( Homo sapiens
cDNA FLJ90637 fis, clone PLACE1003772, weakly similar to
EXTENSIN PRECURSOR. ).
Length = 246
Score = 30.3 bits (65), Expect = 6.7
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +1
Query: 247 PKRPSEASKPDAPPTPLSSDPTAHGPILP 333
P+ PS + +P PP P DPT P+ P
Sbjct: 149 PQTPSASLQPPFPPPPPPGDPTPPSPLPP 177
>AF529415-1|AAQ09524.1| 123|Homo sapiens beta-defensin protein.
Length = 123
Score = 30.3 bits (65), Expect = 6.7
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = +1
Query: 214 DSCHRLSKCCDPKRPSEASKPDAPPTPLS 300
D+C L CC P P PTPLS
Sbjct: 46 DTCKNLRACCIPSNEDHRRVPATSPTPLS 74
>AF347073-1|AAL27987.1| 123|Homo sapiens ESC42 protein.
Length = 123
Score = 30.3 bits (65), Expect = 6.7
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = +1
Query: 214 DSCHRLSKCCDPKRPSEASKPDAPPTPLS 300
D+C L CC P P PTPLS
Sbjct: 46 DTCKNLRACCIPSNEDHRRVPATSPTPLS 74
>U29175-1|AAB40977.1| 1647|Homo sapiens transcriptional activator
protein.
Length = 1647
Score = 29.9 bits (64), Expect = 8.8
Identities = 19/63 (30%), Positives = 38/63 (60%)
Frame = -1
Query: 601 ETR*FKLQARASRCSELKP*ERSKGPSRRESGKGCKGEPILAEG*NLRLEQKQQEDRAEQ 422
E+R K++ + R + + +R KG RR S +G + +P++++ + E++Q+EDR+
Sbjct: 1589 ESRSVKVKIKLGRKEKAQ--DRLKGGRRRPS-RGSRAKPVVSDDDS---EEEQEEDRSGS 1642
Query: 421 GKE 413
G E
Sbjct: 1643 GSE 1645
>D26156-1|BAA05143.1| 1647|Homo sapiens transcriptional activator
hSNF2b protein.
Length = 1647
Score = 29.9 bits (64), Expect = 8.8
Identities = 19/63 (30%), Positives = 38/63 (60%)
Frame = -1
Query: 601 ETR*FKLQARASRCSELKP*ERSKGPSRRESGKGCKGEPILAEG*NLRLEQKQQEDRAEQ 422
E+R K++ + R + + +R KG RR S +G + +P++++ + E++Q+EDR+
Sbjct: 1589 ESRSVKVKIKLGRKEKAQ--DRLKGGRRRPS-RGSRAKPVVSDDDS---EEEQEEDRSGS 1642
Query: 421 GKE 413
G E
Sbjct: 1643 GSE 1645
>BC150298-1|AAI50299.1| 1647|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 1647
Score = 29.9 bits (64), Expect = 8.8
Identities = 19/63 (30%), Positives = 38/63 (60%)
Frame = -1
Query: 601 ETR*FKLQARASRCSELKP*ERSKGPSRRESGKGCKGEPILAEG*NLRLEQKQQEDRAEQ 422
E+R K++ + R + + +R KG RR S +G + +P++++ + E++Q+EDR+
Sbjct: 1589 ESRSVKVKIKLGRKEKAQ--DRLKGGRRRPS-RGSRAKPVVSDDDS---EEEQEEDRSGS 1642
Query: 421 GKE 413
G E
Sbjct: 1643 GSE 1645
>AF254822-2|AAG24789.1| 1647|Homo sapiens SMARCA4 isoform 1 protein.
Length = 1647
Score = 29.9 bits (64), Expect = 8.8
Identities = 19/63 (30%), Positives = 38/63 (60%)
Frame = -1
Query: 601 ETR*FKLQARASRCSELKP*ERSKGPSRRESGKGCKGEPILAEG*NLRLEQKQQEDRAEQ 422
E+R K++ + R + + +R KG RR S +G + +P++++ + E++Q+EDR+
Sbjct: 1589 ESRSVKVKIKLGRKEKAQ--DRLKGGRRRPS-RGSRAKPVVSDDDS---EEEQEEDRSGS 1642
Query: 421 GKE 413
G E
Sbjct: 1643 GSE 1645
>AF254822-1|AAG24790.1| 1679|Homo sapiens SMARCA4 isoform 2 protein.
Length = 1679
Score = 29.9 bits (64), Expect = 8.8
Identities = 19/63 (30%), Positives = 38/63 (60%)
Frame = -1
Query: 601 ETR*FKLQARASRCSELKP*ERSKGPSRRESGKGCKGEPILAEG*NLRLEQKQQEDRAEQ 422
E+R K++ + R + + +R KG RR S +G + +P++++ + E++Q+EDR+
Sbjct: 1621 ESRSVKVKIKLGRKEKAQ--DRLKGGRRRPS-RGSRAKPVVSDDDS---EEEQEEDRSGS 1674
Query: 421 GKE 413
G E
Sbjct: 1675 GSE 1677
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,784,434
Number of Sequences: 237096
Number of extensions: 2252732
Number of successful extensions: 8658
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 7545
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8624
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7783251346
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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