Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060735.seq
(685 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80033-2|AAM15608.1| 1009|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z67754-2|CAA91752.2| 677|Caenorhabditis elegans Hypothetical pr... 30 1.8
U28940-3|AAD31556.1| 1212|Caenorhabditis elegans Transbilayer am... 30 1.8
U28940-1|AAD31557.1| 1454|Caenorhabditis elegans Transbilayer am... 30 1.8
U00033-9|AAC48293.1| 323|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 29 2.3
AF101315-2|AAC69228.1| 990|Caenorhabditis elegans Hypothetical ... 29 2.3
AL033509-1|CAA22059.1| 1494|Caenorhabditis elegans Hypothetical ... 29 3.1
AC017117-3|AAF16619.1| 339|Caenorhabditis elegans Hypothetical ... 29 3.1
AC024830-9|ABQ13052.1| 1594|Caenorhabditis elegans Hypothetical ... 29 4.1
Z22179-17|CAA80171.2| 691|Caenorhabditis elegans Hypothetical p... 28 5.4
Z22173-3|CAA80127.2| 691|Caenorhabditis elegans Hypothetical pr... 28 5.4
AC006804-1|AAF60755.1| 340|Caenorhabditis elegans Hypothetical ... 28 5.4
Z97190-1|CAB10024.1| 1111|Caenorhabditis elegans Hypothetical pr... 28 7.1
Z81131-2|CAB03425.1| 349|Caenorhabditis elegans Hypothetical pr... 28 7.1
AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical ... 28 7.1
AF026205-6|AAM69068.1| 908|Caenorhabditis elegans Hypothetical ... 28 7.1
AF026205-5|AAB71258.1| 880|Caenorhabditis elegans Hypothetical ... 28 7.1
AF026205-4|AAD47129.1| 885|Caenorhabditis elegans Hypothetical ... 28 7.1
AF026205-3|AAB71257.1| 930|Caenorhabditis elegans Hypothetical ... 28 7.1
U88169-12|AAB42231.1| 419|Caenorhabditis elegans Hypothetical p... 27 9.4
U55376-2|AAA98004.1| 132|Caenorhabditis elegans C.elegans homeo... 27 9.4
AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical ... 27 9.4
>U80033-2|AAM15608.1| 1009|Caenorhabditis elegans Hypothetical
protein T23H2.3 protein.
Length = 1009
Score = 30.3 bits (65), Expect = 1.3
Identities = 17/36 (47%), Positives = 23/36 (63%)
Frame = +1
Query: 79 P*PNCYRTTLV*RLKTSSGSKPSVPYTGSS*DTPKP 186
P PN R+TL ++TSSG+ P PY GS +P+P
Sbjct: 191 PPPN--RSTLP-SVETSSGNSPQTPYPGSPEASPQP 223
>Z67754-2|CAA91752.2| 677|Caenorhabditis elegans Hypothetical
protein C34E11.2 protein.
Length = 677
Score = 29.9 bits (64), Expect = 1.8
Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Frame = +1
Query: 229 LSKCCDPKRPSEASKPDAPPT-PLSSDPTAHGPILPHKEL--FGISSPDHEC 375
L + + + + S+ D PPT P S PT + P LP K+ +P+H C
Sbjct: 401 LKETSEIREANAVSEDDEPPTNPPSPAPTVNVPTLPRKDYNQSPAHTPEHVC 452
>U28940-3|AAD31556.1| 1212|Caenorhabditis elegans Transbilayer
amphipath transporters(subfamily iv p-type atpase)
protein 4, isoform a protein.
Length = 1212
Score = 29.9 bits (64), Expect = 1.8
Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 1/81 (1%)
Frame = +1
Query: 226 RLSKCCDPKRPSEASKPDAPPTPLSSDPTAHGPILPHKELFGISSPDHE-CTFLNRKRLN 402
RL+ + PS++ PDA P L PT PI ++ L +SS + T + R L
Sbjct: 569 RLTVIVEEDTPSDSPAPDASPRDLPETPTPTSPI--YRPLSSLSSFSRKLSTVVRRSILR 626
Query: 403 VSTLPFPAQPCLLVAFAQASN 465
+ P + L+ QA N
Sbjct: 627 PISDIIPVRKRLISFKQQAMN 647
>U28940-1|AAD31557.1| 1454|Caenorhabditis elegans Transbilayer
amphipath transporters(subfamily iv p-type atpase)
protein 4, isoform b protein.
Length = 1454
Score = 29.9 bits (64), Expect = 1.8
Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 1/81 (1%)
Frame = +1
Query: 226 RLSKCCDPKRPSEASKPDAPPTPLSSDPTAHGPILPHKELFGISSPDHE-CTFLNRKRLN 402
RL+ + PS++ PDA P L PT PI ++ L +SS + T + R L
Sbjct: 569 RLTVIVEEDTPSDSPAPDASPRDLPETPTPTSPI--YRPLSSLSSFSRKLSTVVRRSILR 626
Query: 403 VSTLPFPAQPCLLVAFAQASN 465
+ P + L+ QA N
Sbjct: 627 PISDIIPVRKRLISFKQQAMN 647
>U00033-9|AAC48293.1| 323|Caenorhabditis elegans Hypothetical
protein F37C12.1 protein.
Length = 323
Score = 29.9 bits (64), Expect = 1.8
Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Frame = +1
Query: 124 TSSGSKPSVPYTG--SS*DTPKPQ*TRDKIR*DSCHRLSKCCDPKRPSEASKPDAPPTPL 297
TSS KP++P G S ++ K RD+ + +K +P S AS + P PL
Sbjct: 242 TSSMLKPAIPKLGMDDSGNSRKRNEQRDRFAGIKLIKKAKPSEPSTSSTASSTSSAPPPL 301
Query: 298 SSDPTAHG 321
S + G
Sbjct: 302 PSSAASSG 309
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical
protein F45B8.3 protein.
Length = 241
Score = 29.5 bits (63), Expect = 2.3
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = +1
Query: 238 CCDPKRPSEASKPDAPPTPLSSDPTAHGP 324
CC RPS + P PP PL P P
Sbjct: 70 CCGAPRPSPSCCPYVPPAPLPPPPPPASP 98
>AF101315-2|AAC69228.1| 990|Caenorhabditis elegans Hypothetical
protein T22H9.3 protein.
Length = 990
Score = 29.5 bits (63), Expect = 2.3
Identities = 18/57 (31%), Positives = 26/57 (45%)
Frame = +1
Query: 247 PKRPSEASKPDAPPTPLSSDPTAHGPILPHKELFGISSPDHECTFLNRKRLNVSTLP 417
PKR +S+ D P T + P LP ++ F I + LN LN+S +P
Sbjct: 22 PKRTRRSSEVDVPATKRPAPPLTSSTSLPTRDSFSII--ETRDVQLNMFALNISGMP 76
>AL033509-1|CAA22059.1| 1494|Caenorhabditis elegans Hypothetical
protein Y113G7C.1 protein.
Length = 1494
Score = 29.1 bits (62), Expect = 3.1
Identities = 13/42 (30%), Positives = 25/42 (59%)
Frame = +2
Query: 158 PAHPETPPSPSKQEIKSGETLATGFPNVATLSAPRKPRNQTP 283
PA P T +PS++++++G + + + A SAP +P + P
Sbjct: 99 PASPPTVKAPSRRKLRAGRSPSLWKRDSALGSAPSRPDSSPP 140
>AC017117-3|AAF16619.1| 339|Caenorhabditis elegans Hypothetical
protein F43C11.9 protein.
Length = 339
Score = 29.1 bits (62), Expect = 3.1
Identities = 18/63 (28%), Positives = 28/63 (44%)
Frame = +2
Query: 95 IEQPSSNVSKHHQVQNQAYLTPAHPETPPSPSKQEIKSGETLATGFPNVATLSAPRKPRN 274
+ P SK + + L P PPS Q +KS L T + ++ APRK +
Sbjct: 222 LPSPRQPESKPSNEASSSQLEPTSASQPPSRVDQILKSRSGLPTKDADSSSEVAPRKRKP 281
Query: 275 QTP 283
++P
Sbjct: 282 KSP 284
>AC024830-9|ABQ13052.1| 1594|Caenorhabditis elegans Hypothetical
protein Y55F3BR.2 protein.
Length = 1594
Score = 28.7 bits (61), Expect = 4.1
Identities = 19/48 (39%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Frame = +1
Query: 238 CCDPKR-PSEAS-KPDAPPTPLSSDPTAHGPILPHKELFGISSPDHEC 375
CC PK P A+ KP PPT +S T G I+ K+ I P C
Sbjct: 1397 CCGPKNSPKNATEKPTEPPTTQAS--TTVGAIIVTKKSKPIKVPAQHC 1442
>Z22179-17|CAA80171.2| 691|Caenorhabditis elegans Hypothetical
protein F58A4.11 protein.
Length = 691
Score = 28.3 bits (60), Expect = 5.4
Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = +1
Query: 397 LNVST-LPFPAQPCLLVAFAQASNSTPQR 480
+N+ T LP PA PC A A + STP +
Sbjct: 162 VNIPTGLPMPASPCTTAASAPSVESTPTK 190
>Z22173-3|CAA80127.2| 691|Caenorhabditis elegans Hypothetical
protein F58A4.11 protein.
Length = 691
Score = 28.3 bits (60), Expect = 5.4
Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = +1
Query: 397 LNVST-LPFPAQPCLLVAFAQASNSTPQR 480
+N+ T LP PA PC A A + STP +
Sbjct: 162 VNIPTGLPMPASPCTTAASAPSVESTPTK 190
>AC006804-1|AAF60755.1| 340|Caenorhabditis elegans Hypothetical
protein Y53G8B.2 protein.
Length = 340
Score = 28.3 bits (60), Expect = 5.4
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = -1
Query: 205 FYLLFTGAWGCLRMSRCKVRLVLNLMMF*DVRRGLFDNNWVRGW 74
F+LLFT W L + C ++ RRG + ++WVR W
Sbjct: 44 FFLLFTFQWHILALYACWYFYDMD-----SPRRGGYSSDWVRKW 82
>Z97190-1|CAB10024.1| 1111|Caenorhabditis elegans Hypothetical protein
H05G16.1 protein.
Length = 1111
Score = 27.9 bits (59), Expect = 7.1
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +1
Query: 232 SKCCDPKRPSEASKPDAPPTPLSSDPTAHG 321
SK DP+R ++ + D PP+P S PTA G
Sbjct: 937 SKRTDPRRQTQPVRFDLPPSPCS--PTAGG 964
>Z81131-2|CAB03425.1| 349|Caenorhabditis elegans Hypothetical
protein T24D1.3 protein.
Length = 349
Score = 27.9 bits (59), Expect = 7.1
Identities = 19/65 (29%), Positives = 28/65 (43%), Gaps = 3/65 (4%)
Frame = +2
Query: 98 EQPSSNVSKHHQVQ---NQAYLTPAHPETPPSPSKQEIKSGETLATGFPNVATLSAPRKP 268
+Q + + H VQ N A PA P TPP P ++ + PN + +S R+
Sbjct: 41 DQAFAQLIHDHDVQHINNDANQVPAAPNTPPVPVPPPVQQPQ----ASPNASPVSVLRRR 96
Query: 269 RNQTP 283
R P
Sbjct: 97 RYANP 101
>AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical
protein ZC123.1 protein.
Length = 730
Score = 27.9 bits (59), Expect = 7.1
Identities = 10/25 (40%), Positives = 11/25 (44%)
Frame = +1
Query: 238 CCDPKRPSEASKPDAPPTPLSSDPT 312
CC P P+ P PP P PT
Sbjct: 132 CCPPPTPAAPPPPPPPPPPAPEAPT 156
>AF026205-6|AAM69068.1| 908|Caenorhabditis elegans Hypothetical
protein T23E7.2e protein.
Length = 908
Score = 27.9 bits (59), Expect = 7.1
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +1
Query: 247 PKRPSEASKPDAPPTPLSSDPTAHGPI 327
P P A+ D PPTP S+ A+G I
Sbjct: 370 PPTPRSAAPSDVPPTPKSNGHIANGSI 396
>AF026205-5|AAB71258.1| 880|Caenorhabditis elegans Hypothetical
protein T23E7.2b protein.
Length = 880
Score = 27.9 bits (59), Expect = 7.1
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +1
Query: 247 PKRPSEASKPDAPPTPLSSDPTAHGPI 327
P P A+ D PPTP S+ A+G I
Sbjct: 320 PPTPRSAAPSDVPPTPKSNGHIANGSI 346
>AF026205-4|AAD47129.1| 885|Caenorhabditis elegans Hypothetical
protein T23E7.2c protein.
Length = 885
Score = 27.9 bits (59), Expect = 7.1
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +1
Query: 247 PKRPSEASKPDAPPTPLSSDPTAHGPI 327
P P A+ D PPTP S+ A+G I
Sbjct: 370 PPTPRSAAPSDVPPTPKSNGHIANGSI 396
>AF026205-3|AAB71257.1| 930|Caenorhabditis elegans Hypothetical
protein T23E7.2a protein.
Length = 930
Score = 27.9 bits (59), Expect = 7.1
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +1
Query: 247 PKRPSEASKPDAPPTPLSSDPTAHGPI 327
P P A+ D PPTP S+ A+G I
Sbjct: 370 PPTPRSAAPSDVPPTPKSNGHIANGSI 396
>U88169-12|AAB42231.1| 419|Caenorhabditis elegans Hypothetical
protein T03F1.1 protein.
Length = 419
Score = 27.5 bits (58), Expect = 9.4
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +2
Query: 113 NVSKHHQVQNQAYLTPAHPETPPSPSKQEIK 205
NV K H +++ + P H P+P +Q+I+
Sbjct: 22 NVKKDHPLESSSNSKPTHQPKSPAPYRQKIE 52
>U55376-2|AAA98004.1| 132|Caenorhabditis elegans C.elegans homeobox
protein 1 protein.
Length = 132
Score = 27.5 bits (58), Expect = 9.4
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +1
Query: 250 KRPSEASKPDAPPTPLSSDPTAHGPILPHKELFGISS 360
K+ + + P TP SSD T PILP + SS
Sbjct: 57 KKHNPGQDANTPQTPPSSDETQIQPILPANPITSFSS 93
>AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical
protein Y40C5A.3 protein.
Length = 2344
Score = 27.5 bits (58), Expect = 9.4
Identities = 13/46 (28%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Frame = +2
Query: 155 TPAHPETPPSPSKQEIKSGETLATGFPNVATLS---APRKPRNQTP 283
+P + TP P+K + SGE+ A P++ ++ +P +P + P
Sbjct: 555 SPVYGPTPSEPAKPSMPSGESPAQPEPSIPAVNPEPSPSQPSSSGP 600
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,349,506
Number of Sequences: 27780
Number of extensions: 318659
Number of successful extensions: 1272
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1150
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1268
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1560745544
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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