Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060731.seq
         (640 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   5.0  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   6.6  
AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    21   8.7  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = -1

Query: 121  TSKSNSFWISTTFEPKSIWLQTKLKSTS 38
            T+K +++W STT  P   W  T  + T+
Sbjct: 1036 TTKPSTWWSSTTTSP--WWTTTTTRRTT 1061


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -3

Query: 341 CTAPRPQPFNNFQ 303
           CT  R Q FNN+Q
Sbjct: 508 CTVLRVQRFNNYQ 520


>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 13/41 (31%), Positives = 19/41 (46%)
 Frame = -3

Query: 332 PRPQPFNNFQFSDKNVIKPHFISNTQLSINLVFHRMSQPCQ 210
           PRP   +N   S   V K    S  Q  ++ + H++S P Q
Sbjct: 96  PRPGSNDNSWESLIEVTKTSETSKLQQLVDNIEHKLSDPNQ 136


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,203
Number of Sequences: 336
Number of extensions: 3209
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16501678
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)