Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060731.seq
         (640 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.          26   0.88 
M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.              25   1.5  
AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR ...    25   2.0  
AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.            23   6.2  
AB090821-1|BAC57917.1|  353|Anopheles gambiae gag-like protein p...    23   6.2  

>AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.
          Length = 506

 Score = 26.2 bits (55), Expect = 0.88
 Identities = 19/73 (26%), Positives = 32/73 (43%)
 Frame = -3

Query: 473 DLLRIVRLKGCDSLEKALSIVLEEVNFMFQYSSRNKMLKQQNTQCTAPRPQPFNNFQFSD 294
           DL     LK  D  E A  +  +EV     + +RN+   Q + Q  +P+ Q  +      
Sbjct: 96  DLNSHTELKPLDVCEYAYHLKKDEVCINPYHYARNESHSQHSQQQQSPQQQQSSQQLQQP 155

Query: 293 KNVIKPHFISNTQ 255
             ++ P  +SN+Q
Sbjct: 156 LTILVPKNLSNSQ 168


>M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.
          Length = 613

 Score = 25.4 bits (53), Expect = 1.5
 Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 2/59 (3%)
 Frame = -2

Query: 207 QPQQQNKFKFGIPASKQIKLPQTQQFGYRPQNQTHF--GYRPPLNQNQFGYKPNLNQPQ 37
           Q QQQ + +      ++ +  Q QQ   +PQ Q      Y+PP  + Q   +    QPQ
Sbjct: 300 QQQQQEQQELWTTVVRRRQNTQQQQQSNQPQQQQQQTGRYQPPQMRQQLQQQQQQRQPQ 358


>AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR
           protein.
          Length = 640

 Score = 25.0 bits (52), Expect = 2.0
 Identities = 10/25 (40%), Positives = 12/25 (48%)
 Frame = +2

Query: 125 YPNCCVCGNFICLLAGIPNLNLFCC 199
           Y N      FI +L G+P L   CC
Sbjct: 569 YMNARFRSGFILVLHGVPGLQQLCC 593


>AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.
          Length = 1152

 Score = 23.4 bits (48), Expect = 6.2
 Identities = 13/23 (56%), Positives = 17/23 (73%), Gaps = 1/23 (4%)
 Frame = -3

Query: 527 SYNI*QLSM-NVFLYNLPEDLLR 462
           S N+ QL++ N  L+ LPEDLLR
Sbjct: 351 SANLTQLNLANNRLHQLPEDLLR 373


>AB090821-1|BAC57917.1|  353|Anopheles gambiae gag-like protein
           protein.
          Length = 353

 Score = 23.4 bits (48), Expect = 6.2
 Identities = 26/105 (24%), Positives = 42/105 (40%)
 Frame = -2

Query: 336 GS*TSTVQQFSIFR*KCNKTSFH**HTTQYKFGIPQNVATMSNQPQQQNKFKFGIPASKQ 157
           GS  S++   S     CN +S    H+ +   G+ Q       QPQ+Q      +  ++Q
Sbjct: 38  GSPLSSISSSSRNSSSCNNSSSSGTHSDRPVAGMLQQQQQQQRQPQRQ-----AVVGTQQ 92

Query: 156 IKLPQTQQFGYRPQNQTHFGYRPPLNQNQFGYKPNLNQPQFGYRP 22
            +  + QQ   +  N T    R  L +N+      L Q Q  + P
Sbjct: 93  QQQRRQQQQHQQRSNATQAQRREQL-RNEQRRPARLRQDQIIFEP 136


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 619,467
Number of Sequences: 2352
Number of extensions: 10796
Number of successful extensions: 63
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 63
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 63
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 62723250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)