Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060731.seq
(640 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC063894-1|AAH63894.1| 816|Homo sapiens DENND2C protein protein. 33 1.1
AL133382-2|CAI19301.1| 871|Homo sapiens DENN/MADD domain contai... 33 1.1
AL133382-1|CAM27633.1| 928|Homo sapiens DENN/MADD domain contai... 33 1.1
D63879-1|BAA09929.1| 963|Homo sapiens KIAA0156 protein. 31 3.4
BC111983-1|AAI11984.1| 963|Homo sapiens squamous cell carcinoma... 31 3.4
BC103706-1|AAI03707.1| 615|Homo sapiens SART3 protein protein. 31 3.4
BC093784-1|AAH93784.1| 963|Homo sapiens squamous cell carcinoma... 31 3.4
BC032601-1|AAH32601.1| 615|Homo sapiens SART3 protein protein. 31 3.4
AK094418-1|BAC04351.1| 301|Homo sapiens protein ( Homo sapiens ... 31 3.4
AF387506-1|AAK69347.1| 364|Homo sapiens KIAA0156 isoform protein. 31 3.4
AC005483-1|AAC83404.2| 484|Homo sapiens unknown protein. 31 3.4
AB020880-1|BAA78384.1| 963|Homo sapiens squamous cell carcinoma... 31 3.4
U91935-1|AAB49728.1| 648|Homo sapiens retina-derived POU-domain... 31 4.6
U91934-1|AAB49727.1| 684|Homo sapiens retina-derived POU-domain... 31 4.6
>BC063894-1|AAH63894.1| 816|Homo sapiens DENND2C protein protein.
Length = 816
Score = 32.7 bits (71), Expect = 1.1
Identities = 19/73 (26%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
Frame = -3
Query: 482 LPEDLLRIVRLKGCDSLEKALSIVLEEVNFMFQYSSRNKMLKQQNTQC---TAPRPQPFN 312
LP D L + L+ CDS EK L+ + + ++ S N + + +C P P+P
Sbjct: 156 LPPDKLLNLALEHCDSSEKELNFRVLDSSYGITKSLENIYSEPEGQECGPSINPLPKPRR 215
Query: 311 NFQFSDKNVIKPH 273
F++ ++ + P+
Sbjct: 216 TFRYLSESGVTPY 228
>AL133382-2|CAI19301.1| 871|Homo sapiens DENN/MADD domain
containing 2C protein.
Length = 871
Score = 32.7 bits (71), Expect = 1.1
Identities = 19/73 (26%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
Frame = -3
Query: 482 LPEDLLRIVRLKGCDSLEKALSIVLEEVNFMFQYSSRNKMLKQQNTQC---TAPRPQPFN 312
LP D L + L+ CDS EK L+ + + ++ S N + + +C P P+P
Sbjct: 156 LPPDKLLNLALEHCDSSEKELNFRVLDSSYGITKSLENIYSEPEGQECGPSINPLPKPRR 215
Query: 311 NFQFSDKNVIKPH 273
F++ ++ + P+
Sbjct: 216 TFRYLSESGVTPY 228
>AL133382-1|CAM27633.1| 928|Homo sapiens DENN/MADD domain
containing 2C protein.
Length = 928
Score = 32.7 bits (71), Expect = 1.1
Identities = 19/73 (26%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
Frame = -3
Query: 482 LPEDLLRIVRLKGCDSLEKALSIVLEEVNFMFQYSSRNKMLKQQNTQC---TAPRPQPFN 312
LP D L + L+ CDS EK L+ + + ++ S N + + +C P P+P
Sbjct: 156 LPPDKLLNLALEHCDSSEKELNFRVLDSSYGITKSLENIYSEPEGQECGPSINPLPKPRR 215
Query: 311 NFQFSDKNVIKPH 273
F++ ++ + P+
Sbjct: 216 TFRYLSESGVTPY 228
>D63879-1|BAA09929.1| 963|Homo sapiens KIAA0156 protein.
Length = 963
Score = 31.1 bits (67), Expect = 3.4
Identities = 13/23 (56%), Positives = 19/23 (82%)
Frame = -3
Query: 512 QLSMNVFLYNLPEDLLRIVRLKG 444
QLS+NV+ YN DL+R++RL+G
Sbjct: 104 QLSINVYDYNCHVDLIRLLRLEG 126
>BC111983-1|AAI11984.1| 963|Homo sapiens squamous cell carcinoma
antigen recognized by T cells 3 protein.
Length = 963
Score = 31.1 bits (67), Expect = 3.4
Identities = 13/23 (56%), Positives = 19/23 (82%)
Frame = -3
Query: 512 QLSMNVFLYNLPEDLLRIVRLKG 444
QLS+NV+ YN DL+R++RL+G
Sbjct: 104 QLSINVYDYNCHVDLIRLLRLEG 126
>BC103706-1|AAI03707.1| 615|Homo sapiens SART3 protein protein.
Length = 615
Score = 31.1 bits (67), Expect = 3.4
Identities = 13/23 (56%), Positives = 19/23 (82%)
Frame = -3
Query: 512 QLSMNVFLYNLPEDLLRIVRLKG 444
QLS+NV+ YN DL+R++RL+G
Sbjct: 104 QLSINVYDYNCHVDLIRLLRLEG 126
>BC093784-1|AAH93784.1| 963|Homo sapiens squamous cell carcinoma
antigen recognized by T cells 3 protein.
Length = 963
Score = 31.1 bits (67), Expect = 3.4
Identities = 13/23 (56%), Positives = 19/23 (82%)
Frame = -3
Query: 512 QLSMNVFLYNLPEDLLRIVRLKG 444
QLS+NV+ YN DL+R++RL+G
Sbjct: 104 QLSINVYDYNCHVDLIRLLRLEG 126
>BC032601-1|AAH32601.1| 615|Homo sapiens SART3 protein protein.
Length = 615
Score = 31.1 bits (67), Expect = 3.4
Identities = 13/23 (56%), Positives = 19/23 (82%)
Frame = -3
Query: 512 QLSMNVFLYNLPEDLLRIVRLKG 444
QLS+NV+ YN DL+R++RL+G
Sbjct: 104 QLSINVYDYNCHVDLIRLLRLEG 126
>AK094418-1|BAC04351.1| 301|Homo sapiens protein ( Homo sapiens
cDNA FLJ37099 fis, clone BRACE2019044. ).
Length = 301
Score = 31.1 bits (67), Expect = 3.4
Identities = 18/72 (25%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Frame = -3
Query: 479 PEDLLRIVRLKGCDSLEKALSIVLEEVNFMFQYSSRNKMLKQQNTQC---TAPRPQPFNN 309
P D L + L+ CDS EK L+ + + ++ S N + + +C P P+P
Sbjct: 157 PPDKLLNLALEHCDSSEKELNFRVLDSSYGITKSLENIYSEPEGQECGPSINPLPKPRRT 216
Query: 308 FQFSDKNVIKPH 273
F++ ++ + P+
Sbjct: 217 FRYLSESGVTPY 228
>AF387506-1|AAK69347.1| 364|Homo sapiens KIAA0156 isoform protein.
Length = 364
Score = 31.1 bits (67), Expect = 3.4
Identities = 13/23 (56%), Positives = 19/23 (82%)
Frame = -3
Query: 512 QLSMNVFLYNLPEDLLRIVRLKG 444
QLS+NV+ YN DL+R++RL+G
Sbjct: 104 QLSINVYDYNCHVDLIRLLRLEG 126
>AC005483-1|AAC83404.2| 484|Homo sapiens unknown protein.
Length = 484
Score = 31.1 bits (67), Expect = 3.4
Identities = 22/63 (34%), Positives = 27/63 (42%)
Frame = -2
Query: 258 TTQYKFGIPQNVATMSNQPQQQNKFKFGIPASKQIKLPQTQQFGYRPQNQTHFGYRPPLN 79
T Q+ PQ + QP Q + PAS+Q P T Q PQ Q H + N
Sbjct: 30 TNQHPQPAPQAPSQSQQQPLQPTPPQQPPPASQQPPAP-TSQLQQAPQPQQHQPHSHSQN 88
Query: 78 QNQ 70
QNQ
Sbjct: 89 QNQ 91
>AB020880-1|BAA78384.1| 963|Homo sapiens squamous cell carcinoma
antigen SART-3 protein.
Length = 963
Score = 31.1 bits (67), Expect = 3.4
Identities = 13/23 (56%), Positives = 19/23 (82%)
Frame = -3
Query: 512 QLSMNVFLYNLPEDLLRIVRLKG 444
QLS+NV+ YN DL+R++RL+G
Sbjct: 104 QLSINVYDYNCHVDLIRLLRLEG 126
>U91935-1|AAB49728.1| 648|Homo sapiens retina-derived POU-domain
factor-1 protein.
Length = 648
Score = 30.7 bits (66), Expect = 4.6
Identities = 22/63 (34%), Positives = 27/63 (42%)
Frame = -2
Query: 258 TTQYKFGIPQNVATMSNQPQQQNKFKFGIPASKQIKLPQTQQFGYRPQNQTHFGYRPPLN 79
T Q+ PQ + QP Q + PAS+Q P T Q PQ Q H + N
Sbjct: 194 TNQHPQPAPQAPSQSQQQPLQPTPPQQPPPASQQPPAP-TSQLQQAPQPQQHQPHSHSHN 252
Query: 78 QNQ 70
QNQ
Sbjct: 253 QNQ 255
>U91934-1|AAB49727.1| 684|Homo sapiens retina-derived POU-domain
factor-1 protein.
Length = 684
Score = 30.7 bits (66), Expect = 4.6
Identities = 22/63 (34%), Positives = 27/63 (42%)
Frame = -2
Query: 258 TTQYKFGIPQNVATMSNQPQQQNKFKFGIPASKQIKLPQTQQFGYRPQNQTHFGYRPPLN 79
T Q+ PQ + QP Q + PAS+Q P T Q PQ Q H + N
Sbjct: 194 TNQHPQPAPQAPSQSQQQPLQPTPPQQPPPASQQPPAP-TSQLQQAPQPQQHQPHSHSHN 252
Query: 78 QNQ 70
QNQ
Sbjct: 253 QNQ 255
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,628,358
Number of Sequences: 237096
Number of extensions: 1536131
Number of successful extensions: 3908
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 3854
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3897
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7028963750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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