Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060729.seq
(674 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI0000E48FA2 Cluster: PREDICTED: similar to mini-chrom... 56 8e-07
UniRef50_UPI000051A385 Cluster: PREDICTED: similar to DNA replic... 56 1e-06
UniRef50_UPI00015B5C8D Cluster: PREDICTED: similar to mini-chrom... 55 1e-06
UniRef50_Q6NRM6 Cluster: DNA replication licensing factor MCM9; ... 52 1e-05
UniRef50_UPI0000D557CF Cluster: PREDICTED: similar to minichromo... 50 5e-05
UniRef50_Q9NXL9 Cluster: DNA replication licensing factor MCM9; ... 46 0.001
UniRef50_Q54MD0 Cluster: MCM family protein; n=1; Dictyostelium ... 38 0.29
UniRef50_Q0S1M1 Cluster: Possible hydrolase; n=1; Rhodococcus sp... 36 0.90
UniRef50_Q9HBW1 Cluster: Leucine-rich repeat-containing protein ... 34 3.6
UniRef50_Q4FN76 Cluster: Putative uncharacterized protein; n=2; ... 33 6.3
UniRef50_A2YAR1 Cluster: Putative uncharacterized protein; n=1; ... 33 6.3
UniRef50_Q9XNK1 Cluster: DNA polymerase; n=1; Pleurotus ostreatu... 33 6.3
>UniRef50_UPI0000E48FA2 Cluster: PREDICTED: similar to
mini-chromosome maintenance deficient 9; n=1;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
mini-chromosome maintenance deficient 9 -
Strongylocentrotus purpuratus
Length = 1217
Score = 56.0 bits (129), Expect = 8e-07
Identities = 33/122 (27%), Positives = 59/122 (48%), Gaps = 1/122 (0%)
Frame = +1
Query: 274 EYTMILE-YILKFHLDDCFNVLSEKDNLGYFSIKIDFLKLFENHPDVGDRVLCAPIETLP 450
EY ++ E Y + H +D +L +++ ++S++ID + LFE + +V + +L +P+ TLP
Sbjct: 14 EYIVVFESYSREQHKEDIEGILLKEEESQHYSVQIDAMTLFETNMEVSELILTSPLITLP 73
Query: 451 ICDKDIVMAQQHIIESEEFKIQFRN*NMFS*RRMFMPDFMVYLVCPELHRTVFPKNVDLG 630
+ D + + + K R +P CPEL R P+N D+G
Sbjct: 74 LLDIALTRVAMDVYRNHPEKDNMSMKTNIHGRLTRLP------ACPELVREQLPRNTDIG 127
Query: 631 MF 636
F
Sbjct: 128 RF 129
>UniRef50_UPI000051A385 Cluster: PREDICTED: similar to DNA
replication licensing factor Mcm2 (Minichromosome
maintenance 2 protein) (DmMCM2); n=1; Apis
mellifera|Rep: PREDICTED: similar to DNA replication
licensing factor Mcm2 (Minichromosome maintenance 2
protein) (DmMCM2) - Apis mellifera
Length = 625
Score = 55.6 bits (128), Expect = 1e-06
Identities = 27/74 (36%), Positives = 44/74 (59%)
Frame = +1
Query: 283 MILEYILKFHLDDCFNVLSEKDNLGYFSIKIDFLKLFENHPDVGDRVLCAPIETLPICDK 462
M+ EY+LK H + VL D Y+SI ++F+ LFE+ DV ++L P LP+CD+
Sbjct: 1 MLKEYLLKNHQIELEEVLDNIDINCYYSIYVNFVSLFEDDADVAQKILQYPRYYLPLCDE 60
Query: 463 DIVMAQQHIIESEE 504
+ AQ+ I + ++
Sbjct: 61 AAIKAQEEIAKPKQ 74
>UniRef50_UPI00015B5C8D Cluster: PREDICTED: similar to
mini-chromosome maintenance deficient 9; n=1; Nasonia
vitripennis|Rep: PREDICTED: similar to mini-chromosome
maintenance deficient 9 - Nasonia vitripennis
Length = 655
Score = 55.2 bits (127), Expect = 1e-06
Identities = 23/72 (31%), Positives = 41/72 (56%)
Frame = +1
Query: 283 MILEYILKFHLDDCFNVLSEKDNLGYFSIKIDFLKLFENHPDVGDRVLCAPIETLPICDK 462
M+ EY L+ H ++ ++ + F I +DF+ LFE+ + +++L P + LPICD
Sbjct: 1 MLKEYFLQNHAEELLEIIKNPEEFKTFPIHLDFIVLFEDDAEKANKILSRPRQYLPICDN 60
Query: 463 DIVMAQQHIIES 498
V AQ+ + E+
Sbjct: 61 SAVEAQRELAEN 72
>UniRef50_Q6NRM6 Cluster: DNA replication licensing factor MCM9;
n=1; Xenopus laevis|Rep: DNA replication licensing
factor MCM9 - Xenopus laevis (African clawed frog)
Length = 1143
Score = 52.0 bits (119), Expect = 1e-05
Identities = 31/114 (27%), Positives = 56/114 (49%)
Frame = +1
Query: 295 YILKFHLDDCFNVLSEKDNLGYFSIKIDFLKLFENHPDVGDRVLCAPIETLPICDKDIVM 474
++L+ H ++ +L+EK+ ++S+ ++ + LFE + ++G+ P E LP+ D +
Sbjct: 18 FVLEHHKNEIAQILTEKEEHAHYSLVVNAMTLFEANMEIGEYFNAFPNEVLPVFDNALRC 77
Query: 475 AQQHIIESEEFKIQFRN*NMFS*RRMFMPDFMVYLVCPELHRTVFPKNVDLGMF 636
A ++S K F R +P VCPEL R P+ D+G F
Sbjct: 78 AAMSFLQSCSEKYTFLMKQNLHARITGLP------VCPELTREHIPRTRDVGHF 125
>UniRef50_UPI0000D557CF Cluster: PREDICTED: similar to
minichromosome maintenance protein domain containing 1;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
minichromosome maintenance protein domain containing 1 -
Tribolium castaneum
Length = 898
Score = 50.0 bits (114), Expect = 5e-05
Identities = 30/115 (26%), Positives = 61/115 (53%)
Frame = +1
Query: 292 EYILKFHLDDCFNVLSEKDNLGYFSIKIDFLKLFENHPDVGDRVLCAPIETLPICDKDIV 471
+Y+L ++ D+ +L ++D +FS+ ++F+++ N P++ + L P +TL + +
Sbjct: 4 QYLLSYYKDEIIEILKDQDEHKHFSVNVNFVEMSGNEPNLVNDFLREPEKTLEEWNNALK 63
Query: 472 MAQQHIIESEEFKIQFRN*NMFS*RRMFMPDFMVYLVCPELHRTVFPKNVDLGMF 636
+ +++ E +N N+ R +P + PELHRT FP+N D+ F
Sbjct: 64 RVETNLLLQFEDLYTIKN-NIHC-RIYSLPMY------PELHRTKFPQNDDVNKF 110
>UniRef50_Q9NXL9 Cluster: DNA replication licensing factor MCM9;
n=30; Eukaryota|Rep: DNA replication licensing factor
MCM9 - Homo sapiens (Human)
Length = 1143
Score = 45.6 bits (103), Expect = 0.001
Identities = 31/116 (26%), Positives = 58/116 (50%), Gaps = 2/116 (1%)
Frame = +1
Query: 295 YILKFHLDDCFNVLSEKDNLGYFSIKIDFLKLFENHPDVGDRVLCAPIETLPICDKDIVM 474
Y+ ++H +D +L E+D ++ + ++ + LFE + ++G+ P E L I D +
Sbjct: 16 YVSEYHKNDILLILKERDEDAHYPVVVNAMTLFETNMEIGEYFNMFPSEVLTIFDSALRR 75
Query: 475 AQQHIIES--EEFKIQFRN*NMFS*RRMFMPDFMVYLVCPELHRTVFPKNVDLGMF 636
+ I++S + + + N+ + R +P VCPEL R PK D+G F
Sbjct: 76 SALTILQSLSQPEAVSMKQ-NLHA-RISGLP------VCPELVREHIPKTKDVGHF 123
>UniRef50_Q54MD0 Cluster: MCM family protein; n=1; Dictyostelium
discoideum AX4|Rep: MCM family protein - Dictyostelium
discoideum AX4
Length = 1275
Score = 37.5 bits (83), Expect = 0.29
Identities = 19/81 (23%), Positives = 45/81 (55%)
Frame = +1
Query: 298 ILKFHLDDCFNVLSEKDNLGYFSIKIDFLKLFENHPDVGDRVLCAPIETLPICDKDIVMA 477
+L ++ + +VL++ D ++S+ ++F ++ E + G + P + LPI ++ +++A
Sbjct: 23 LLSNYVKEIEHVLNQPDPSLFYSLIVEFSQILEGDVNFGPLFIAEPSKLLPIFNEALLIA 82
Query: 478 QQHIIESEEFKIQFRN*NMFS 540
Q+ I+E + + N FS
Sbjct: 83 QEKIVELNNIQ-HIKQSNSFS 102
>UniRef50_Q0S1M1 Cluster: Possible hydrolase; n=1; Rhodococcus sp.
RHA1|Rep: Possible hydrolase - Rhodococcus sp. (strain
RHA1)
Length = 359
Score = 35.9 bits (79), Expect = 0.90
Identities = 16/34 (47%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Frame = +1
Query: 373 IDFLKLFENHPDVGDRVLCAPIETLPIC-DKDIV 471
+DFL F+NH + L APIETL +C D+D++
Sbjct: 228 VDFLPSFKNHDETAAVPLLAPIETLVVCGDRDLL 261
>UniRef50_Q9HBW1 Cluster: Leucine-rich repeat-containing protein 4
precursor; n=25; Vertebrata|Rep: Leucine-rich
repeat-containing protein 4 precursor - Homo sapiens
(Human)
Length = 653
Score = 33.9 bits (74), Expect = 3.6
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +2
Query: 506 LKYSFEIRICFHKEECSCQILWFTWFVRSY 595
L+Y E+ + + C C ILW W++R Y
Sbjct: 289 LRYLVELHLHHNPWNCDCDILWLAWWLREY 318
>UniRef50_Q4FN76 Cluster: Putative uncharacterized protein; n=2;
Candidatus Pelagibacter ubique|Rep: Putative
uncharacterized protein - Pelagibacter ubique
Length = 562
Score = 33.1 bits (72), Expect = 6.3
Identities = 11/33 (33%), Positives = 22/33 (66%)
Frame = +1
Query: 295 YILKFHLDDCFNVLSEKDNLGYFSIKIDFLKLF 393
+I+K + DDC+ ++ +K N+ YF ++ +LF
Sbjct: 454 HIIKIYEDDCYELIFKKSNILYFKSNVNIAQLF 486
>UniRef50_A2YAR1 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (indica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. indica
(Rice)
Length = 470
Score = 33.1 bits (72), Expect = 6.3
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +1
Query: 295 YILKFHLDDCFNVL-SEKDNLGYFSIKIDFLKLFENHPDVGDRVLCAPIETLPICD 459
++ +FH DD +L + D +F + IDF +L E P+V ++ P + L + D
Sbjct: 23 FLNRFHADDLRRILLPDPDGKLHFPLVIDFAELLEFDPEVAHQLYDYPKDVLELFD 78
>UniRef50_Q9XNK1 Cluster: DNA polymerase; n=1; Pleurotus
ostreatus|Rep: DNA polymerase - Pleurotus ostreatus
(Oyster mushroom) (White-rot fungus)
Length = 1346
Score = 33.1 bits (72), Expect = 6.3
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Frame = +1
Query: 202 KLHSTVPTYMSCST*IKMINGKLAEYTMILEYILKFHLDDCFNVLSEKDNLGYFSIKI-D 378
K + +P Y+ C T K + K ++Y + E +LKF LD ++ E DN Y++ + D
Sbjct: 700 KNQNAIPYYIGCRTGDKKVFYKYSDYLNVDEMVLKFILD---LMVIENDNRFYYAHNLSD 756
Query: 379 FLKLF 393
F +F
Sbjct: 757 FDGMF 761
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 647,699,431
Number of Sequences: 1657284
Number of extensions: 12763731
Number of successful extensions: 24396
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 23775
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24389
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 52066120554
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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