Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060729.seq
         (674 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ chann...    25   2.2  
AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium ch...    25   2.2  
AY214334-1|AAP69612.1|  519|Anopheles gambiae nicotinate phospho...    24   3.8  
AY299455-1|AAQ73620.1|  493|Anopheles gambiae FMRF amide recepto...    24   5.0  

>AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ channel
           protein.
          Length = 574

 Score = 25.0 bits (52), Expect = 2.2
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +3

Query: 69  LSIYEYYQKNNCEL 110
           LS Y  Y +NNCEL
Sbjct: 355 LSYYSVYSRNNCEL 368


>AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium
           channel protein.
          Length = 572

 Score = 25.0 bits (52), Expect = 2.2
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +3

Query: 69  LSIYEYYQKNNCEL 110
           LS Y  Y +NNCEL
Sbjct: 355 LSYYSVYSRNNCEL 368


>AY214334-1|AAP69612.1|  519|Anopheles gambiae nicotinate
           phosphoribosyltransferase-like protein protein.
          Length = 519

 Score = 24.2 bits (50), Expect = 3.8
 Identities = 11/20 (55%), Positives = 15/20 (75%), Gaps = 1/20 (5%)
 Frame = +1

Query: 373 IDFL-KLFENHPDVGDRVLC 429
           ID L ++ EN P+VG +VLC
Sbjct: 410 IDLLQRVDENPPEVGQKVLC 429


>AY299455-1|AAQ73620.1|  493|Anopheles gambiae FMRF amide receptor
           protein.
          Length = 493

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 11/30 (36%), Positives = 19/30 (63%)
 Frame = +1

Query: 217 VPTYMSCST*IKMINGKLAEYTMILEYILK 306
           V  ++ C+    MIN   A Y++I+EY++K
Sbjct: 317 VIVFLLCNLPAMMINIVEAFYSLIIEYMVK 346


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 694,375
Number of Sequences: 2352
Number of extensions: 14847
Number of successful extensions: 18
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 67741110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)