Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060727.seq
         (685 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.       22   4.1  
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    22   5.4  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   5.4  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   7.1  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    21   9.4  

>AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.
          Length = 256

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = -1

Query: 520 EANWESSSPMYTPL*LPKI 464
           E NWE     YTP  LP +
Sbjct: 128 ERNWEIREKPYTPPRLPTV 146


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = +2

Query: 581 YKTHSKSIKCTKFFYC 628
           Y  H +   C KF+YC
Sbjct: 113 YFAHEEPHICDKFYYC 128


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +3

Query: 528 SSYLFFIHLNGAFFELLFIKLIRKVL 605
           S+Y+  + +N       FI+ IRKVL
Sbjct: 448 SAYVATVWINSVINRWKFIEFIRKVL 473


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 8/26 (30%), Positives = 16/26 (61%)
 Frame = +3

Query: 489 YIGDDDSQFASRLSSYLFFIHLNGAF 566
           ++G DDS+   +  +Y+  ++L G F
Sbjct: 486 WVGYDDSESVEKKVNYVQEMNLGGVF 511


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 11/36 (30%), Positives = 17/36 (47%)
 Frame = +3

Query: 519 SRLSSYLFFIHLNGAFFELLFIKLIRKVLNAPNFFI 626
           S +  Y+FF HL+   + ++   L   VL     FI
Sbjct: 270 SYIVMYVFFFHLSDVRYVMVVYLLKNVVLYGLELFI 305


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,665
Number of Sequences: 336
Number of extensions: 2912
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17906060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)