Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060727.seq
         (685 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY534996-1|AAT07394.1|  471|Anopheles gambiae XK-related b protein.    24   5.1  
AY553322-1|AAT36323.1|  426|Anopheles gambiae G-protein coupled ...    23   9.0  

>AY534996-1|AAT07394.1|  471|Anopheles gambiae XK-related b protein.
          Length = 471

 Score = 23.8 bits (49), Expect = 5.1
 Identities = 11/43 (25%), Positives = 25/43 (58%), Gaps = 5/43 (11%)
 Frame = +2

Query: 359 IFYFLFRI-----KVLRTFLMSNLHYGYTFKIALLHCRSVYFW 472
           IF FL+R+     +V+   + ++++  + F + +LH  S++ W
Sbjct: 352 IFQFLWRLGTVISRVISLTVYASVYSHWVFLVIILHWFSMFLW 394


>AY553322-1|AAT36323.1|  426|Anopheles gambiae G-protein coupled
           receptor 4 protein.
          Length = 426

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 14/54 (25%), Positives = 22/54 (40%)
 Frame = +1

Query: 520 HVSVVICSLYTLMELFLNYYL*NSFEKY*MHQIFLLRWXLRISARIARSLLCEG 681
           H   V C ++  M  F  Y   N      + + F + + LR+SA   R  +  G
Sbjct: 144 HAGNVACKVFLFMRAFCLYLSSNVLVCVSLDRCFAVIYPLRVSAARKRGKIMLG 197


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 621,958
Number of Sequences: 2352
Number of extensions: 11574
Number of successful extensions: 18
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68995575
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)