Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060726.seq
         (686 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q1HQ58 Cluster: F-box only protein 21; n=1; Bombyx mori...   243   3e-63
UniRef50_UPI00015B5324 Cluster: PREDICTED: similar to KIAA0875 p...    36   0.70 
UniRef50_Q7RR96 Cluster: Putative uncharacterized protein PY0083...    35   1.6  
UniRef50_Q54K75 Cluster: Putative uncharacterized protein; n=1; ...    35   2.1  
UniRef50_A6LLH6 Cluster: Surface antigen variable number repeat ...    34   3.7  
UniRef50_A5E220 Cluster: Putative uncharacterized protein; n=1; ...    34   3.7  
UniRef50_A0LDI1 Cluster: Metallophosphoesterase; n=1; Magnetococ...    33   8.6  
UniRef50_Q24BP1 Cluster: Putative uncharacterized protein; n=1; ...    33   8.6  

>UniRef50_Q1HQ58 Cluster: F-box only protein 21; n=1; Bombyx
           mori|Rep: F-box only protein 21 - Bombyx mori (Silk
           moth)
          Length = 606

 Score =  243 bits (595), Expect = 3e-63
 Identities = 115/137 (83%), Positives = 118/137 (86%)
 Frame = +1

Query: 256 CQEILNFSSTCKHFNXLVNTDQQLWKEKLKELIPDAAFVVVESDCHDGDWLEEIKGFYYI 435
           CQEILNFSSTCKHFN LVNTDQQLWKEKLKELIPDAAFVVVESDCHDGDWLEEIKGFYYI
Sbjct: 24  CQEILNFSSTCKHFNELVNTDQQLWKEKLKELIPDAAFVVVESDCHDGDWLEEIKGFYYI 83

Query: 436 KNYVFSELKTMSPTHYCKRDDLTKRMSEISLMLQFQLK*VWAYAINILQDFMKITSELAD 615
           KNYVFSELKTMSPTHYCKRDDLTK+       +    K   AYAINILQDF+KITSELAD
Sbjct: 84  KNYVFSELKTMSPTHYCKRDDLTKQDVRDFFNVAISTKMSLAYAINILQDFIKITSELAD 143

Query: 616 AYACXKPFTLAEMLXAR 666
           AYAC KPFTL EM  AR
Sbjct: 144 AYACKKPFTLTEMHYAR 160



 Score = 44.4 bits (100), Expect = 0.003
 Identities = 21/22 (95%), Positives = 21/22 (95%)
 Frame = +2

Query: 188 MDEELSXYSLPAEVISIILKNN 253
           MDEELS YSLPAEVISIILKNN
Sbjct: 1   MDEELSIYSLPAEVISIILKNN 22


>UniRef50_UPI00015B5324 Cluster: PREDICTED: similar to KIAA0875
           protein; n=1; Nasonia vitripennis|Rep: PREDICTED:
           similar to KIAA0875 protein - Nasonia vitripennis
          Length = 617

 Score = 36.3 bits (80), Expect = 0.70
 Identities = 19/80 (23%), Positives = 41/80 (51%), Gaps = 2/80 (2%)
 Frame = +1

Query: 262 EILNFSSTCKHFNXLVNTDQQLWKEKLKELIPDAAFVVVESD-CHD-GDWLEEIKGFYYI 435
           ++L+ + +CKH + +V    +LW+ K  +  P    + +E    H   +W++E +     
Sbjct: 28  DVLSVAFSCKHLHRVVLASGKLWRAKFFQRWPSLKEIYLEQQRLHQVQNWVQEAQANIGS 87

Query: 436 KNYVFSELKTMSPTHYCKRD 495
           +  V ++L  MS  +Y K++
Sbjct: 88  RRAVMNQLGLMSAKYYKKQE 107


>UniRef50_Q7RR96 Cluster: Putative uncharacterized protein PY00836;
           n=3; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein PY00836 - Plasmodium yoelii yoelii
          Length = 882

 Score = 35.1 bits (77), Expect = 1.6
 Identities = 27/78 (34%), Positives = 35/78 (44%), Gaps = 6/78 (7%)
 Frame = +1

Query: 139 IQINNYN*LRFTKNTYNG*RTFXIFLTSRSNFYNTEK*CCQEILNFSSTCKHFNXLVNTD 318
           I  NN N    T+N     +     +T  S  +N EK    EIL F      FN L NTD
Sbjct: 700 INTNNLNNFNITENVNRLLKYVDNAMTDYSQLFNEEK--SIEILRFQQLDNTFNILTNTD 757

Query: 319 QQ------LWKEKLKELI 354
            +      L K++LKE+I
Sbjct: 758 DEYSFLMNLLKDELKEMI 775


>UniRef50_Q54K75 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 669

 Score = 34.7 bits (76), Expect = 2.1
 Identities = 21/81 (25%), Positives = 34/81 (41%)
 Frame = +1

Query: 148 NNYN*LRFTKNTYNG*RTFXIFLTSRSNFYNTEK*CCQEILNFSSTCKHFNXLVNTDQQL 327
           NN N      N  N        +++  N YN +K     ++NFS TCK+F  L   D   
Sbjct: 115 NNNNNSNNNNNNNNNINNEEESISANYNSYN-KKTILNVVINFSMTCKYFYYLFQ-DDGF 172

Query: 328 WKEKLKELIPDAAFVVVESDC 390
           W    K    + + + ++ +C
Sbjct: 173 WYRTYKSFFSNYSLIDIDKNC 193


>UniRef50_A6LLH6 Cluster: Surface antigen variable number repeat
           protein precursor; n=1; Thermosipho melanesiensis
           BI429|Rep: Surface antigen variable number repeat
           protein precursor - Thermosipho melanesiensis BI429
          Length = 727

 Score = 33.9 bits (74), Expect = 3.7
 Identities = 21/69 (30%), Positives = 34/69 (49%)
 Frame = +1

Query: 316 DQQLWKEKLKELIPDAAFVVVESDCHDGDWLEEIKGFYYIKNYVFSELKTMSPTHYCKRD 495
           D++ +   +K  I D  F++  ++   GD   EI+G    K Y F +L ++ P  Y  RD
Sbjct: 324 DEKNYIVSVKPEIRDEEFLIHVTEYKFGD--VEIEGLEQTKPYTFDDLISIKPGGYANRD 381

Query: 496 DLTKRMSEI 522
           +L     EI
Sbjct: 382 ELRNTYVEI 390


>UniRef50_A5E220 Cluster: Putative uncharacterized protein; n=1;
           Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
           uncharacterized protein - Lodderomyces elongisporus
           (Yeast) (Saccharomyces elongisporus)
          Length = 829

 Score = 33.9 bits (74), Expect = 3.7
 Identities = 14/41 (34%), Positives = 25/41 (60%)
 Frame = +2

Query: 8   RYNTVHFVVIVTQRICKLFTYIRCLKCKFCSVLYNLLAVTS 130
           RY  ++F +IV +   +  + ++CL+CKF S  YN  ++ S
Sbjct: 591 RYLKLNFSIIVDKFQGQYLSQLKCLECKFTSTSYNAFSILS 631


>UniRef50_A0LDI1 Cluster: Metallophosphoesterase; n=1; Magnetococcus
           sp. MC-1|Rep: Metallophosphoesterase - Magnetococcus sp.
           (strain MC-1)
          Length = 404

 Score = 32.7 bits (71), Expect = 8.6
 Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
 Frame = +1

Query: 298 NXLVNTDQQLWKEKLKELIP-DAAFVVVESDCHDGDWLEEIKGFY 429
           N L N  +  W   + E I    AFV V  D +DGDW +   G +
Sbjct: 31  NLLENLTRNAWNRLVDEAISKQVAFVAVAGDLYDGDWKDYRTGHF 75


>UniRef50_Q24BP1 Cluster: Putative uncharacterized protein; n=1;
            Tetrahymena thermophila SB210|Rep: Putative
            uncharacterized protein - Tetrahymena thermophila SB210
          Length = 1811

 Score = 32.7 bits (71), Expect = 8.6
 Identities = 19/66 (28%), Positives = 32/66 (48%)
 Frame = +1

Query: 259  QEILNFSSTCKHFNXLVNTDQQLWKEKLKELIPDAAFVVVESDCHDGDWLEEIKGFYYIK 438
            +E +N    C+     V  D Q +++ L +  P   FV+V +     DW  ++ G YY +
Sbjct: 1659 KECINSCQKCQKKEISVPLDNQTFQKHLNDGTP---FVIVRASI---DWKNKVNGQYYSQ 1712

Query: 439  NYVFSE 456
            N  +SE
Sbjct: 1713 NIYYSE 1718


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 608,571,174
Number of Sequences: 1657284
Number of extensions: 10760374
Number of successful extensions: 22930
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 22293
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22922
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 53719013270
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)