Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060725.seq
(506 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M17887-1|AAA36472.1| 115|Homo sapiens protein ( Human acidic ri... 84 2e-16
CR542248-1|CAG47044.1| 115|Homo sapiens RPLP2 protein. 84 2e-16
CR542212-1|CAG47008.1| 115|Homo sapiens RPLP2 protein. 84 2e-16
BC062314-1|AAH62314.1| 115|Homo sapiens ribosomal protein, larg... 84 2e-16
BC007573-1|AAH07573.1| 115|Homo sapiens ribosomal protein, larg... 84 2e-16
BC005920-1|AAH05920.1| 115|Homo sapiens ribosomal protein, larg... 84 2e-16
BC005354-1|AAH05354.1| 115|Homo sapiens ribosomal protein, larg... 84 2e-16
AB061837-1|BAB79475.1| 115|Homo sapiens ribosomal protein P2 pr... 84 2e-16
AK126665-1|BAC86634.1| 1012|Homo sapiens protein ( Homo sapiens ... 30 4.0
AB127405-1|BAD03968.1| 1183|Homo sapiens SNAP-25-interacting pro... 30 4.0
AB051471-1|BAB21775.1| 762|Homo sapiens KIAA1684 protein protein. 30 4.0
BC009431-1|AAH09431.1| 559|Homo sapiens family with sequence si... 29 7.1
AY358207-1|AAQ88574.1| 559|Homo sapiens WTNF5791 protein. 29 7.1
AK054664-1|BAB70787.1| 559|Homo sapiens protein ( Homo sapiens ... 29 7.1
U64871-1|AAB49751.1| 415|Homo sapiens GPR19 protein. 29 9.3
U55312-1|AAB00316.1| 415|Homo sapiens GPR-NGA protein. 29 9.3
U33839-1|AAA75594.1| 264|Homo sapiens potassium channel protein. 29 9.3
CR456832-1|CAG33113.1| 415|Homo sapiens GPR19 protein. 29 9.3
>M17887-1|AAA36472.1| 115|Homo sapiens protein ( Human acidic
ribosomal phosphoprotein P2 mRNA, complete cds. ).
Length = 115
Score = 84.2 bits (199), Expect = 2e-16
Identities = 38/58 (65%), Positives = 50/58 (86%)
Frame = +2
Query: 74 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAG 247
MRYVA+YLLA LGG ++P+A D++KIL SVGIEAD ++L KVI+ELNGK++E +IA G
Sbjct: 1 MRYVASYLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQG 58
>CR542248-1|CAG47044.1| 115|Homo sapiens RPLP2 protein.
Length = 115
Score = 84.2 bits (199), Expect = 2e-16
Identities = 38/58 (65%), Positives = 50/58 (86%)
Frame = +2
Query: 74 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAG 247
MRYVA+YLLA LGG ++P+A D++KIL SVGIEAD ++L KVI+ELNGK++E +IA G
Sbjct: 1 MRYVASYLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQG 58
>CR542212-1|CAG47008.1| 115|Homo sapiens RPLP2 protein.
Length = 115
Score = 84.2 bits (199), Expect = 2e-16
Identities = 38/58 (65%), Positives = 50/58 (86%)
Frame = +2
Query: 74 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAG 247
MRYVA+YLLA LGG ++P+A D++KIL SVGIEAD ++L KVI+ELNGK++E +IA G
Sbjct: 1 MRYVASYLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQG 58
>BC062314-1|AAH62314.1| 115|Homo sapiens ribosomal protein, large,
P2 protein.
Length = 115
Score = 84.2 bits (199), Expect = 2e-16
Identities = 38/58 (65%), Positives = 50/58 (86%)
Frame = +2
Query: 74 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAG 247
MRYVA+YLLA LGG ++P+A D++KIL SVGIEAD ++L KVI+ELNGK++E +IA G
Sbjct: 1 MRYVASYLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQG 58
>BC007573-1|AAH07573.1| 115|Homo sapiens ribosomal protein, large,
P2 protein.
Length = 115
Score = 84.2 bits (199), Expect = 2e-16
Identities = 38/58 (65%), Positives = 50/58 (86%)
Frame = +2
Query: 74 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAG 247
MRYVA+YLLA LGG ++P+A D++KIL SVGIEAD ++L KVI+ELNGK++E +IA G
Sbjct: 1 MRYVASYLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQG 58
>BC005920-1|AAH05920.1| 115|Homo sapiens ribosomal protein, large,
P2 protein.
Length = 115
Score = 84.2 bits (199), Expect = 2e-16
Identities = 38/58 (65%), Positives = 50/58 (86%)
Frame = +2
Query: 74 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAG 247
MRYVA+YLLA LGG ++P+A D++KIL SVGIEAD ++L KVI+ELNGK++E +IA G
Sbjct: 1 MRYVASYLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQG 58
>BC005354-1|AAH05354.1| 115|Homo sapiens ribosomal protein, large,
P2 protein.
Length = 115
Score = 84.2 bits (199), Expect = 2e-16
Identities = 38/58 (65%), Positives = 50/58 (86%)
Frame = +2
Query: 74 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAG 247
MRYVA+YLLA LGG ++P+A D++KIL SVGIEAD ++L KVI+ELNGK++E +IA G
Sbjct: 1 MRYVASYLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQG 58
>AB061837-1|BAB79475.1| 115|Homo sapiens ribosomal protein P2
protein.
Length = 115
Score = 84.2 bits (199), Expect = 2e-16
Identities = 38/58 (65%), Positives = 50/58 (86%)
Frame = +2
Query: 74 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAG 247
MRYVA+YLLA LGG ++P+A D++KIL SVGIEAD ++L KVI+ELNGK++E +IA G
Sbjct: 1 MRYVASYLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQG 58
>AK126665-1|BAC86634.1| 1012|Homo sapiens protein ( Homo sapiens
cDNA FLJ44709 fis, clone BRACE3019570, highly similar
to Rattus norvegicus SNAP-25-interacting protein (SNIP).
).
Length = 1012
Score = 30.3 bits (65), Expect = 4.0
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +2
Query: 113 GKTTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLI 238
G TP V+K +S E D E+ + +T+ + KD+ +L+
Sbjct: 765 GLDTPGKRSVDKAVSVEAAERDWEEKRAALTQYSAKDINRLL 806
>AB127405-1|BAD03968.1| 1183|Homo sapiens SNAP-25-interacting protein
protein.
Length = 1183
Score = 30.3 bits (65), Expect = 4.0
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +2
Query: 113 GKTTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLI 238
G TP V+K +S E D E+ + +T+ + KD+ +L+
Sbjct: 893 GLDTPGKRSVDKAVSVEAAERDWEEKRAALTQYSAKDINRLL 934
>AB051471-1|BAB21775.1| 762|Homo sapiens KIAA1684 protein protein.
Length = 762
Score = 30.3 bits (65), Expect = 4.0
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +2
Query: 113 GKTTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLI 238
G TP V+K +S E D E+ + +T+ + KD+ +L+
Sbjct: 472 GLDTPGKRSVDKAVSVEAAERDWEEKRAALTQYSAKDINRLL 513
>BC009431-1|AAH09431.1| 559|Homo sapiens family with sequence
similarity 55, member C protein.
Length = 559
Score = 29.5 bits (63), Expect = 7.1
Identities = 15/51 (29%), Positives = 27/51 (52%)
Frame = +2
Query: 47 RFVSIRT*KMRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADAEKLKKV 199
RF ++ + ++ YVA L ++GGK T A V S+ +E +L+ +
Sbjct: 413 RFTTVFSNELHYVANELNGIVGGKNTVVAIAVWSHFSTFPLEVYIRRLRNI 463
>AY358207-1|AAQ88574.1| 559|Homo sapiens WTNF5791 protein.
Length = 559
Score = 29.5 bits (63), Expect = 7.1
Identities = 15/51 (29%), Positives = 27/51 (52%)
Frame = +2
Query: 47 RFVSIRT*KMRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADAEKLKKV 199
RF ++ + ++ YVA L ++GGK T A V S+ +E +L+ +
Sbjct: 413 RFTTVFSNELHYVANELNGIVGGKNTVVAIAVWSHFSTFPLEVYIRRLRNI 463
>AK054664-1|BAB70787.1| 559|Homo sapiens protein ( Homo sapiens
cDNA FLJ30102 fis, clone BNGH41000137, weakly similar to
BRUSH BORDER 61.9 KD PROTEIN PRECURSOR. ).
Length = 559
Score = 29.5 bits (63), Expect = 7.1
Identities = 15/51 (29%), Positives = 27/51 (52%)
Frame = +2
Query: 47 RFVSIRT*KMRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADAEKLKKV 199
RF ++ + ++ YVA L ++GGK T A V S+ +E +L+ +
Sbjct: 413 RFTTVFSNELHYVANELNGIVGGKNTVVAIAVWSHFSTFPLEVYIRRLRNI 463
>U64871-1|AAB49751.1| 415|Homo sapiens GPR19 protein.
Length = 415
Score = 29.1 bits (62), Expect = 9.3
Identities = 17/50 (34%), Positives = 27/50 (54%)
Frame = -3
Query: 270 WH*RQLSRPAAISCSTSLPLSSVITFLSFSASASIPTELRIFSTSAAAGV 121
+H QL P S + + IT++SFS+SAS PT I++ + G+
Sbjct: 292 FHVAQLWHPHEQDYKKSSLVFTAITWISFSSSASKPTLYSIYNANFRRGM 341
>U55312-1|AAB00316.1| 415|Homo sapiens GPR-NGA protein.
Length = 415
Score = 29.1 bits (62), Expect = 9.3
Identities = 17/50 (34%), Positives = 27/50 (54%)
Frame = -3
Query: 270 WH*RQLSRPAAISCSTSLPLSSVITFLSFSASASIPTELRIFSTSAAAGV 121
+H QL P S + + IT++SFS+SAS PT I++ + G+
Sbjct: 292 FHVAQLWHPHEQDYKKSSLVFTAITWISFSSSASKPTLYSIYNANFRRGM 341
>U33839-1|AAA75594.1| 264|Homo sapiens potassium channel protein.
Length = 264
Score = 29.1 bits (62), Expect = 9.3
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = -3
Query: 249 RPAAISCSTSLPLSSVITF-LSFSASASIPTELRIFSTSA 133
RP AISC ++ SS I + + F S+ +P ++ ST+A
Sbjct: 131 RPCAISCDKNVTTSSAICWHMGFWLSSILPASGKLVSTTA 170
>CR456832-1|CAG33113.1| 415|Homo sapiens GPR19 protein.
Length = 415
Score = 29.1 bits (62), Expect = 9.3
Identities = 17/50 (34%), Positives = 27/50 (54%)
Frame = -3
Query: 270 WH*RQLSRPAAISCSTSLPLSSVITFLSFSASASIPTELRIFSTSAAAGV 121
+H QL P S + + IT++SFS+SAS PT I++ + G+
Sbjct: 292 FHVAQLWHPHEQDYKKSSLVFTAITWISFSSSASKPTLYSIYNANFRRGM 341
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 54,049,258
Number of Sequences: 237096
Number of extensions: 732568
Number of successful extensions: 1632
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1600
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1631
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4706589866
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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