Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060724.seq
(516 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein. 27 0.50
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein. 25 1.5
DQ974164-1|ABJ52804.1| 410|Anopheles gambiae serpin 4C protein. 24 3.5
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript... 23 4.6
AY334004-1|AAR01129.1| 194|Anopheles gambiae integrin protein. 23 6.1
AY334003-1|AAR01128.1| 194|Anopheles gambiae integrin protein. 23 6.1
AY334002-1|AAR01127.1| 194|Anopheles gambiae integrin protein. 23 6.1
AY334001-1|AAR01126.1| 194|Anopheles gambiae integrin protein. 23 6.1
AJ130951-1|CAA10260.1| 189|Anopheles gambiae SG3 protein protein. 23 6.1
AF492464-1|AAM11657.1| 803|Anopheles gambiae beta nu integrin s... 23 6.1
Z22930-3|CAA80515.1| 275|Anopheles gambiae trypsin protein. 23 8.1
AJ438610-4|CAD27476.1| 593|Anopheles gambiae putative transcrip... 23 8.1
>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
Length = 1212
Score = 26.6 bits (56), Expect = 0.50
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +1
Query: 322 RQDFLKRVKENERLLKEAKAAGKTVNLKRQPAPP 423
R++ +R +E +L EA A + N + QP PP
Sbjct: 1101 REEDERRTEERRQLHNEANRAYRQRNRRSQPTPP 1134
>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
Length = 1132
Score = 25.0 bits (52), Expect = 1.5
Identities = 18/68 (26%), Positives = 31/68 (45%)
Frame = +1
Query: 307 KHSKCRQDFLKRVKENERLLKEAKAAGKTVNLKRQPAPPKAAHIVSGTEKPVLLAPIPYE 486
KH C + +E +++ KEA +T+NL + +A + GT + V + Y
Sbjct: 323 KHRLCELNREPTEREEQQMQKEAAVMARTMNLNQVCLCFRAYRVEPGTGRWVPICEPVYS 382
Query: 487 FVA*SPIN 510
+PIN
Sbjct: 383 ----NPIN 386
>DQ974164-1|ABJ52804.1| 410|Anopheles gambiae serpin 4C protein.
Length = 410
Score = 23.8 bits (49), Expect = 3.5
Identities = 11/36 (30%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +2
Query: 179 HKVYHGKTGRVYN-VTAHALGVIVNKLFAEGLYRSA 283
H HG+ + + ++A + +IVN L+ GL+ A
Sbjct: 92 HNQTHGRIADIVSHISADTILMIVNTLYFRGLWEEA 127
>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
protein.
Length = 1022
Score = 23.4 bits (48), Expect = 4.6
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = -1
Query: 162 TAPLPLMSTMSPTLYTFMYVE 100
TA +P S + PTL+ MY E
Sbjct: 607 TAGVPQGSVLGPTLWNLMYNE 627
>AY334004-1|AAR01129.1| 194|Anopheles gambiae integrin protein.
Length = 194
Score = 23.0 bits (47), Expect = 6.1
Identities = 6/14 (42%), Positives = 9/14 (64%)
Frame = +1
Query: 223 CSCSRCDCQQAVRG 264
C+C RC C ++ G
Sbjct: 42 CNCGRCSCDESFFG 55
>AY334003-1|AAR01128.1| 194|Anopheles gambiae integrin protein.
Length = 194
Score = 23.0 bits (47), Expect = 6.1
Identities = 6/14 (42%), Positives = 9/14 (64%)
Frame = +1
Query: 223 CSCSRCDCQQAVRG 264
C+C RC C ++ G
Sbjct: 42 CNCGRCSCDESFFG 55
>AY334002-1|AAR01127.1| 194|Anopheles gambiae integrin protein.
Length = 194
Score = 23.0 bits (47), Expect = 6.1
Identities = 6/14 (42%), Positives = 9/14 (64%)
Frame = +1
Query: 223 CSCSRCDCQQAVRG 264
C+C RC C ++ G
Sbjct: 42 CNCGRCSCDESFFG 55
>AY334001-1|AAR01126.1| 194|Anopheles gambiae integrin protein.
Length = 194
Score = 23.0 bits (47), Expect = 6.1
Identities = 6/14 (42%), Positives = 9/14 (64%)
Frame = +1
Query: 223 CSCSRCDCQQAVRG 264
C+C RC C ++ G
Sbjct: 42 CNCGRCSCDESFFG 55
>AJ130951-1|CAA10260.1| 189|Anopheles gambiae SG3 protein protein.
Length = 189
Score = 23.0 bits (47), Expect = 6.1
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = -1
Query: 222 VTLYTRPVFPWYTLCGIP 169
V ++ RP PW+++ GIP
Sbjct: 73 VGIFGRPGRPWWSVPGIP 90
>AF492464-1|AAM11657.1| 803|Anopheles gambiae beta nu integrin
subunit AgBnu protein.
Length = 803
Score = 23.0 bits (47), Expect = 6.1
Identities = 6/14 (42%), Positives = 9/14 (64%)
Frame = +1
Query: 223 CSCSRCDCQQAVRG 264
C+C RC C ++ G
Sbjct: 618 CNCGRCSCDESFFG 631
>Z22930-3|CAA80515.1| 275|Anopheles gambiae trypsin protein.
Length = 275
Score = 22.6 bits (46), Expect = 8.1
Identities = 8/26 (30%), Positives = 15/26 (57%)
Frame = -2
Query: 299 STRILMRFGIILPRTAC*QSHREHEQ 222
S +I + ++L AC Q+H H++
Sbjct: 2 SNKITILLAVLLAVVACAQAHASHQR 27
>AJ438610-4|CAD27476.1| 593|Anopheles gambiae putative
transcription factor protein.
Length = 593
Score = 22.6 bits (46), Expect = 8.1
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +1
Query: 73 VPHTWNYSALHVHESVQS 126
V +TWNY+A V + V S
Sbjct: 282 VENTWNYTAADVADLVDS 299
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 547,004
Number of Sequences: 2352
Number of extensions: 11207
Number of successful extensions: 32
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 46937349
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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