Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060723.seq
         (494 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY166585-1|AAN86032.1|  990|Drosophila melanogaster HAMLET protein.    28   8.0  
AE014134-2973|AAF53703.3| 1108|Drosophila melanogaster CG31753-P...    28   8.0  

>AY166585-1|AAN86032.1|  990|Drosophila melanogaster HAMLET protein.
          Length = 990

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +1

Query: 412 KADASXPTPSSQPPLVKSEGPPTS 483
           K  +  PTP++ P L  S  PPTS
Sbjct: 691 KGSSPTPTPTASPGLTPSPSPPTS 714


>AE014134-2973|AAF53703.3| 1108|Drosophila melanogaster CG31753-PA
           protein.
          Length = 1108

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +1

Query: 412 KADASXPTPSSQPPLVKSEGPPTS 483
           K  +  PTP++ P L  S  PPTS
Sbjct: 809 KGSSPTPTPTASPGLTPSPSPPTS 832


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,185,332
Number of Sequences: 53049
Number of extensions: 434364
Number of successful extensions: 981
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 945
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 981
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1742533632
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)