Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060720.seq
         (641 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    26   1.2  
AB090822-1|BAC57919.1|  468|Anopheles gambiae gag-like protein p...    25   2.7  

>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 25.8 bits (54), Expect = 1.2
 Identities = 12/46 (26%), Positives = 17/46 (36%)
 Frame = +1

Query: 1   RHEETHKRDGRRYCFIRXXXXXXXXXXXXHCNAQMKTGPYKIKNLD 138
           RH +TH  D    C +             H N    T P++ K+ D
Sbjct: 144 RHLKTHSEDRPHKCVVCERGFKTLASLQNHVNTHTGTKPHRCKHCD 189


>AB090822-1|BAC57919.1|  468|Anopheles gambiae gag-like protein
           protein.
          Length = 468

 Score = 24.6 bits (51), Expect = 2.7
 Identities = 13/36 (36%), Positives = 17/36 (47%)
 Frame = +3

Query: 81  RRTLQRANENGSVQN*KLGHYPAQGNAAKGRGNHHR 188
           RR+  R NE  S Q  +  H P Q +  +  G  HR
Sbjct: 200 RRSDNRRNERESTQYQQSVHQPQQSSRDQQHGAQHR 235


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 566,694
Number of Sequences: 2352
Number of extensions: 10425
Number of successful extensions: 29
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63141405
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)