Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060720.seq
         (641 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF192484-1|AAF27346.1|  440|Drosophila melanogaster discs overgr...    28   9.4  
AF132558-1|AAD27857.1|  440|Drosophila melanogaster double-time ...    28   9.4  
AF055583-1|AAC39134.1|  440|Drosophila melanogaster casein kinas...    28   9.4  
AE014297-4701|AAF57109.1|  440|Drosophila melanogaster CG2048-PC...    28   9.4  
AE014297-4700|AAF57108.1|  440|Drosophila melanogaster CG2048-PB...    28   9.4  
AE014297-4699|AAF57110.1|  440|Drosophila melanogaster CG2048-PA...    28   9.4  

>AF192484-1|AAF27346.1|  440|Drosophila melanogaster discs overgrown
           protein.
          Length = 440

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = -3

Query: 186 DGDFHVLLQRFLGRGNVQVFNFVRTRFHLR 97
           +GD++V++   LG     +FNF   RF L+
Sbjct: 74  EGDYNVMVMELLGPSLEDLFNFCSRRFSLK 103


>AF132558-1|AAD27857.1|  440|Drosophila melanogaster double-time
           protein.
          Length = 440

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = -3

Query: 186 DGDFHVLLQRFLGRGNVQVFNFVRTRFHLR 97
           +GD++V++   LG     +FNF   RF L+
Sbjct: 74  EGDYNVMVMELLGPSLEDLFNFCSRRFSLK 103


>AF055583-1|AAC39134.1|  440|Drosophila melanogaster casein kinase I
           homolog protein.
          Length = 440

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = -3

Query: 186 DGDFHVLLQRFLGRGNVQVFNFVRTRFHLR 97
           +GD++V++   LG     +FNF   RF L+
Sbjct: 74  EGDYNVMVMELLGPSLEDLFNFCSRRFSLK 103


>AE014297-4701|AAF57109.1|  440|Drosophila melanogaster CG2048-PC,
           isoform C protein.
          Length = 440

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = -3

Query: 186 DGDFHVLLQRFLGRGNVQVFNFVRTRFHLR 97
           +GD++V++   LG     +FNF   RF L+
Sbjct: 74  EGDYNVMVMELLGPSLEDLFNFCSRRFSLK 103


>AE014297-4700|AAF57108.1|  440|Drosophila melanogaster CG2048-PB,
           isoform B protein.
          Length = 440

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = -3

Query: 186 DGDFHVLLQRFLGRGNVQVFNFVRTRFHLR 97
           +GD++V++   LG     +FNF   RF L+
Sbjct: 74  EGDYNVMVMELLGPSLEDLFNFCSRRFSLK 103


>AE014297-4699|AAF57110.1|  440|Drosophila melanogaster CG2048-PA,
           isoform A protein.
          Length = 440

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = -3

Query: 186 DGDFHVLLQRFLGRGNVQVFNFVRTRFHLR 97
           +GD++V++   LG     +FNF   RF L+
Sbjct: 74  EGDYNVMVMELLGPSLEDLFNFCSRRFSLK 103


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,382,495
Number of Sequences: 53049
Number of extensions: 432402
Number of successful extensions: 1539
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1492
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1539
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2703623850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)