Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060720.seq
         (641 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U64835-5|AAG24196.1|  592|Caenorhabditis elegans Hypothetical pr...    29   3.7  
Z81031-8|CAJ55248.1|  363|Caenorhabditis elegans Hypothetical pr...    28   6.5  
Z69903-8|CAD56585.3|  363|Caenorhabditis elegans Hypothetical pr...    28   6.5  
Z69903-5|CAH60762.2|  497|Caenorhabditis elegans Hypothetical pr...    28   6.5  
Z69903-4|CAA93775.3|  479|Caenorhabditis elegans Hypothetical pr...    28   6.5  
Z69903-3|CAI79241.1|  480|Caenorhabditis elegans Hypothetical pr...    28   6.5  
AY836558-1|AAW21316.1|  479|Caenorhabditis elegans casein kinase...    28   6.5  
AY836557-1|AAW21315.1|  297|Caenorhabditis elegans casein kinase...    28   6.5  
AY836556-1|AAW21314.1|  479|Caenorhabditis elegans casein kinase...    28   6.5  

>U64835-5|AAG24196.1|  592|Caenorhabditis elegans Hypothetical
           protein T09D3.3 protein.
          Length = 592

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 13/50 (26%), Positives = 26/50 (52%)
 Frame = -2

Query: 388 LPQRSINSSPTXHCCXIPXMSKSSLPTVSVFMDSSTRVLGSSEPPCTHTP 239
           +P  S +++ T     +P  S ++ PT + +  S++    ++ PP T TP
Sbjct: 459 VPTTSSSTTTTTTTTPVPVTSTTTEPTTTTYTTSTSTSTTTTLPPTTSTP 508


>Z81031-8|CAJ55248.1|  363|Caenorhabditis elegans Hypothetical
           protein F46F2.2b protein.
          Length = 363

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 10/30 (33%), Positives = 19/30 (63%)
 Frame = -3

Query: 186 DGDFHVLLQRFLGRGNVQVFNFVRTRFHLR 97
           +GD++V++   LG     +FNF + +F L+
Sbjct: 140 EGDYNVMVMELLGPSLEDLFNFCQRKFSLK 169


>Z69903-8|CAD56585.3|  363|Caenorhabditis elegans Hypothetical
           protein F46F2.2b protein.
          Length = 363

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 10/30 (33%), Positives = 19/30 (63%)
 Frame = -3

Query: 186 DGDFHVLLQRFLGRGNVQVFNFVRTRFHLR 97
           +GD++V++   LG     +FNF + +F L+
Sbjct: 140 EGDYNVMVMELLGPSLEDLFNFCQRKFSLK 169


>Z69903-5|CAH60762.2|  497|Caenorhabditis elegans Hypothetical
           protein F46F2.2c protein.
          Length = 497

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 10/30 (33%), Positives = 19/30 (63%)
 Frame = -3

Query: 186 DGDFHVLLQRFLGRGNVQVFNFVRTRFHLR 97
           +GD++V++   LG     +FNF + +F L+
Sbjct: 256 EGDYNVMVMELLGPSLEDLFNFCQRKFSLK 285


>Z69903-4|CAA93775.3|  479|Caenorhabditis elegans Hypothetical
           protein F46F2.2a protein.
          Length = 479

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 10/30 (33%), Positives = 19/30 (63%)
 Frame = -3

Query: 186 DGDFHVLLQRFLGRGNVQVFNFVRTRFHLR 97
           +GD++V++   LG     +FNF + +F L+
Sbjct: 256 EGDYNVMVMELLGPSLEDLFNFCQRKFSLK 285


>Z69903-3|CAI79241.1|  480|Caenorhabditis elegans Hypothetical
           protein F46F2.2d protein.
          Length = 480

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 10/30 (33%), Positives = 19/30 (63%)
 Frame = -3

Query: 186 DGDFHVLLQRFLGRGNVQVFNFVRTRFHLR 97
           +GD++V++   LG     +FNF + +F L+
Sbjct: 256 EGDYNVMVMELLGPSLEDLFNFCQRKFSLK 285


>AY836558-1|AAW21316.1|  479|Caenorhabditis elegans casein kinase I
           epsilon/delta kin-20C protein.
          Length = 479

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 10/30 (33%), Positives = 19/30 (63%)
 Frame = -3

Query: 186 DGDFHVLLQRFLGRGNVQVFNFVRTRFHLR 97
           +GD++V++   LG     +FNF + +F L+
Sbjct: 256 EGDYNVMVMELLGPSLEDLFNFCQRKFSLK 285


>AY836557-1|AAW21315.1|  297|Caenorhabditis elegans casein kinase I
           epsilon/delta kin-20B protein.
          Length = 297

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 10/30 (33%), Positives = 19/30 (63%)
 Frame = -3

Query: 186 DGDFHVLLQRFLGRGNVQVFNFVRTRFHLR 97
           +GD++V++   LG     +FNF + +F L+
Sbjct: 74  EGDYNVMVMELLGPSLEDLFNFCQRKFSLK 103


>AY836556-1|AAW21314.1|  479|Caenorhabditis elegans casein kinase I
           epsilon/delta kin-20A protein.
          Length = 479

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 10/30 (33%), Positives = 19/30 (63%)
 Frame = -3

Query: 186 DGDFHVLLQRFLGRGNVQVFNFVRTRFHLR 97
           +GD++V++   LG     +FNF + +F L+
Sbjct: 256 EGDYNVMVMELLGPSLEDLFNFCQRKFSLK 285


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,201,556
Number of Sequences: 27780
Number of extensions: 211607
Number of successful extensions: 600
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 570
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 600
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1427403330
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)