Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060719.seq
         (647 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    25   0.71 
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    25   0.71 
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    23   2.2  
AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein pr...    22   3.8  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          22   5.0  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    21   6.6  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 24.6 bits (51), Expect = 0.71
 Identities = 21/72 (29%), Positives = 31/72 (43%), Gaps = 5/72 (6%)
 Frame = -3

Query: 345 LEVVHLCVAV---HDLYLHP--CP*LPLFSWNLLVSSTSFSYWCLFIIRRLSRIFCSGGS 181
           L  VHL + V   +  Y+H   C    +F+ +LL     + ++C  II      FC    
Sbjct: 247 LFTVHLLLLVCIYYFYYMHLLFCCAFIIFTMHLLFLLCIYYFYCALIILLCIYYFCRAFI 306

Query: 180 WRPTSFFKFFRL 145
             PT F+  F L
Sbjct: 307 IFPTHFYCAFSL 318



 Score = 23.0 bits (47), Expect = 2.2
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = -3

Query: 279 LFSWNLLVSSTSFSYWCLFIIRRLSRIFC 193
           +F+ +LL     + ++C FII  +  +FC
Sbjct: 155 IFTVHLLFLLCIYHFFCAFIIFTMHLLFC 183


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 24.6 bits (51), Expect = 0.71
 Identities = 12/33 (36%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
 Frame = +1

Query: 442 CNCSL**FSM-CTVKINFCFSLMVQN*NIWLTL 537
           CNC L      C  K+NFC +   QN  +  T+
Sbjct: 324 CNCKLGFMGRHCESKVNFCATSPCQNGGVCTTI 356


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = +3

Query: 477 CENKLLFLINGSKLKYLVNSHVSSNLLNYRDST 575
           C N  ++L    +L  L+  H +++  NYR +T
Sbjct: 313 CVNPWIYLAFNRELPRLLLRHYTASSKNYRSAT 345


>AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein
           protein.
          Length = 203

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = +1

Query: 160 KKRGRPPAATRTKDSAKSSDDEQA 231
           K+R    AA R++D+ ++ +DE A
Sbjct: 141 KRRKNNEAAKRSRDARRAKEDEIA 164


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 14/44 (31%), Positives = 25/44 (56%)
 Frame = +1

Query: 97  VEKKGRGRPKANGTQPESKELKKRGRPPAATRTKDSAKSSDDEQ 228
           V++ G+ +P+    + ES E K    P  + + KDS+  S+DE+
Sbjct: 70  VQQAGK-KPENVKKEDESDEEK----PTTSFKLKDSSSDSEDER 108


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 11/38 (28%), Positives = 17/38 (44%)
 Frame = -1

Query: 263 FWSPLPRLATGACSSSEDLAESFVLVAAGGRPRFLSSF 150
           F + LPR      +       +  + A GG+P  LS+F
Sbjct: 413 FKATLPRYTVAQLNYPGVTVTNIEVQAKGGKPNVLSTF 450


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,988
Number of Sequences: 336
Number of extensions: 2667
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16656800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)