Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060719.seq
(647 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_59580| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.028
SB_37693| Best HMM Match : PHD (HMM E-Value=8.7e-35) 36 0.028
SB_29610| Best HMM Match : Extensin_2 (HMM E-Value=2.3) 34 0.11
SB_15549| Best HMM Match : ADH_zinc_N (HMM E-Value=9.4e-13) 34 0.11
SB_29377| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.35
SB_23345| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.46
SB_51335| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.46
SB_18656| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.46
SB_40929| Best HMM Match : Attractin (HMM E-Value=5.1) 31 1.1
SB_39230| Best HMM Match : SNF2_N (HMM E-Value=1.40004e-41) 31 1.1
SB_20679| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_20363| Best HMM Match : Involucrin (HMM E-Value=0.31) 30 1.9
SB_10643| Best HMM Match : ShTK (HMM E-Value=2.9e-23) 30 1.9
SB_40080| Best HMM Match : DUF1267 (HMM E-Value=2.6) 29 2.5
SB_27251| Best HMM Match : Extensin_2 (HMM E-Value=0.077) 29 3.3
SB_22651| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_36607| Best HMM Match : Vicilin_N (HMM E-Value=3.7) 29 3.3
SB_1052| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_25279| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.3
SB_26185| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.3
SB_39593| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_540| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_47930| Best HMM Match : Vicilin_N (HMM E-Value=1.3) 28 5.7
SB_43314| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_36059| Best HMM Match : TolA (HMM E-Value=0.1) 28 5.7
SB_22053| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_7994| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_38133| Best HMM Match : TolA (HMM E-Value=0.38) 28 7.5
SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.5
SB_32600| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.5
SB_28214| Best HMM Match : Drf_FH1 (HMM E-Value=3.8) 28 7.5
SB_24599| Best HMM Match : Complex1_24kDa (HMM E-Value=0) 28 7.5
SB_57119| Best HMM Match : Ribosomal_L7Ae (HMM E-Value=1.4e-20) 27 9.9
SB_13204| Best HMM Match : GRP (HMM E-Value=0.0017) 27 9.9
SB_6695| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.9
SB_49137| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.9
SB_32504| Best HMM Match : TolA (HMM E-Value=0.52) 27 9.9
SB_12387| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.9
>SB_59580| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 999
Score = 35.9 bits (79), Expect = 0.028
Identities = 20/65 (30%), Positives = 34/65 (52%)
Frame = +1
Query: 103 KKGRGRPKANGTQPESKELKKRGRPPAATRTKDSAKSSDDEQAPVAKRGRGDQKVPRKKR 282
K+ + R KA + E KEL+KR + A + +S KS DE+ A R + + +K++
Sbjct: 812 KEKQERLKAKKKEEEEKELEKRSKTKDAKKYFESWKSKKDEELKEAHRAKMQELKKQKQK 871
Query: 283 ESRAR 297
E +
Sbjct: 872 EEEEK 876
>SB_37693| Best HMM Match : PHD (HMM E-Value=8.7e-35)
Length = 2049
Score = 35.9 bits (79), Expect = 0.028
Identities = 20/71 (28%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Frame = +1
Query: 76 SDDGSTVVEKKGRGRPKANGTQPESKELKKRGRPPAATRTKDSAKSSDDEQAPVAKRGR- 252
SDDG +VE+K R + G P + + + +T+ K SA + ++AP K+ +
Sbjct: 452 SDDGYYIVEEKYRNKYDL-GDPPVFSDSPSKNKESKSTKRKKSATGGEGKEAPAKKKQKH 510
Query: 253 GDQKVPRKKRE 285
D P+K ++
Sbjct: 511 NDGDAPKKSKK 521
>SB_29610| Best HMM Match : Extensin_2 (HMM E-Value=2.3)
Length = 1353
Score = 33.9 bits (74), Expect = 0.11
Identities = 20/67 (29%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Frame = +1
Query: 100 EKKGRGRPKANGTQPESKELKKRGRPPAATR-TKDSAKSSDDEQAPVAKRGRGDQKVPRK 276
++ R R A +P K + RP A+R TK S D+Q P ++ P+
Sbjct: 466 KQAARPRQSARQARPRQSSRKSKARPRQASRKTKTSKPQDQDKQDPRPRQKSRKTNKPQH 525
Query: 277 KRESRAR 297
K+ SR R
Sbjct: 526 KQASRPR 532
Score = 29.1 bits (62), Expect = 3.3
Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 5/70 (7%)
Frame = +1
Query: 103 KKGRGRP---KANGTQPESKELKKRGRPP--AATRTKDSAKSSDDEQAPVAKRGRGDQKV 267
+K + RP +SK+ K+G P A+++TK S D+QA ++ +
Sbjct: 421 RKSKARPTQASRKSKASKSKDQGKQGARPRQASSKTKTSKPEDQDKQAARPRQSARQARP 480
Query: 268 PRKKRESRAR 297
+ R+S+AR
Sbjct: 481 RQSSRKSKAR 490
Score = 28.7 bits (61), Expect = 4.3
Identities = 16/57 (28%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = +1
Query: 136 TQPESKELKKRGRPPAATRTKDSAKSSDDEQAPVAKRGRGDQKVPRK-KRESRARVK 303
++P+ ++ K+ RP A+R ++K D ++ R Q PR+ R+S+AR +
Sbjct: 571 SKPQDQD-KQAARPRQASRKTKTSKPQDQDKQAARPRQAARQARPRQSSRKSKARAR 626
>SB_15549| Best HMM Match : ADH_zinc_N (HMM E-Value=9.4e-13)
Length = 562
Score = 33.9 bits (74), Expect = 0.11
Identities = 17/69 (24%), Positives = 27/69 (39%)
Frame = +1
Query: 91 TVVEKKGRGRPKANGTQPESKELKKRGRPPAATRTKDSAKSSDDEQAPVAKRGRGDQKVP 270
TV ++KG + G P+S E KK+ K D++ P + + K
Sbjct: 473 TVAKEKGASERRRRGRSPKSDEQKKKDEDSKPEEAKPEEPKEDEKSKPEETKAEEEAKPE 532
Query: 271 RKKRESRAR 297
K E A+
Sbjct: 533 APKAEEEAK 541
>SB_29377| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 548
Score = 32.3 bits (70), Expect = 0.35
Identities = 15/59 (25%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = +1
Query: 112 RGRPKANGTQPESKEL-KKRGRPPAATRTKDSAKSSDDEQAPVAKRGRGDQKVPRKKRE 285
R R ++ +P + ++R R + R++D ++S + + RGR +K P K+R+
Sbjct: 223 RSRSRSRDRRPRRRSRDRERSRERRSRRSRDKSRSREKSRERGGSRGRSAEKSPEKQRD 281
Score = 28.3 bits (60), Expect = 5.7
Identities = 18/60 (30%), Positives = 29/60 (48%)
Frame = +1
Query: 91 TVVEKKGRGRPKANGTQPESKELKKRGRPPAATRTKDSAKSSDDEQAPVAKRGRGDQKVP 270
T EKK R +G++ E K+ KK+ R + R S+ +E+ P + R +K P
Sbjct: 483 TEQEKKARDSSHDSGSEYERKKKKKKNRSESQERA-----SASEEETPNKNKKRSYKKKP 537
Score = 27.9 bits (59), Expect = 7.5
Identities = 17/62 (27%), Positives = 29/62 (46%)
Frame = +1
Query: 100 EKKGRGRPKANGTQPESKELKKRGRPPAATRTKDSAKSSDDEQAPVAKRGRGDQKVPRKK 279
EKK R + K + + K+ + RGR R K+ K D ++ ++ R K K+
Sbjct: 318 EKKSRDKDKDRERERKDKKDRDRGRNKDRDRDKERDKDRDRDKERDREKDRERDKDRDKE 377
Query: 280 RE 285
R+
Sbjct: 378 RD 379
>SB_23345| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 903
Score = 31.9 bits (69), Expect = 0.46
Identities = 22/80 (27%), Positives = 36/80 (45%), Gaps = 2/80 (2%)
Frame = +1
Query: 76 SDDGSTVVEKKGRGRP--KANGTQPESKELKKRGRPPAATRTKDSAKSSDDEQAPVAKRG 249
S ST E+K R + K ++ E KE KKR R ++ + ++E+ +
Sbjct: 406 SKTSSTTDEEKERKKSETKNKDSEDEEKERKKREAEEEEERRREEEERREEEERKREEEE 465
Query: 250 RGDQKVPRKKRESRARVKVE 309
R ++ KKRE R + E
Sbjct: 466 RKQREEEEKKREEEERKQRE 485
Score = 29.5 bits (63), Expect = 2.5
Identities = 21/63 (33%), Positives = 31/63 (49%)
Frame = +1
Query: 103 KKGRGRPKANGTQPESKELKKRGRPPAATRTKDSAKSSDDEQAPVAKRGRGDQKVPRKKR 282
KK R K + T E KE KK + T+ KD S+DE+ KR +++ R++
Sbjct: 400 KKKRSHSKTSSTTDEEKERKK-----SETKNKD----SEDEEKERKKREAEEEEERRREE 450
Query: 283 ESR 291
E R
Sbjct: 451 EER 453
>SB_51335| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 576
Score = 31.9 bits (69), Expect = 0.46
Identities = 19/77 (24%), Positives = 41/77 (53%), Gaps = 4/77 (5%)
Frame = +1
Query: 70 TMSDDGSTVVEKKGRGRPKANGTQPE---SKELKKRGRPPAATRTKDSAKSSDDEQAPVA 240
T+ D ++ E+ + KA+ + + +K++ +G+ + + + SSDDE+ VA
Sbjct: 168 TVKADFNSSEEEVSSQKTKASSRKDQKKMNKQMANKGKGAKSKKKTIESNSSDDEEGQVA 227
Query: 241 KRGRG-DQKVPRKKRES 288
+ +G ++ P+K ES
Sbjct: 228 ELRKGASEQFPKKSEES 244
>SB_18656| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3292
Score = 31.9 bits (69), Expect = 0.46
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 6/58 (10%)
Frame = +1
Query: 136 TQPESKELKKRGRPPAATRTKDSAKSSDDEQAPVAKR------GRGDQKVPRKKRESR 291
TQPE+ ++ R P+ +S+ SS DEQ KR G++K P+ K+ +
Sbjct: 2880 TQPETSSDEEETRAPSPVILSESSDSSGDEQISRTKRFISILAPNGEEKTPKSKKRPK 2937
>SB_40929| Best HMM Match : Attractin (HMM E-Value=5.1)
Length = 566
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/54 (31%), Positives = 31/54 (57%)
Frame = +1
Query: 136 TQPESKELKKRGRPPAATRTKDSAKSSDDEQAPVAKRGRGDQKVPRKKRESRAR 297
++P+ K+ KK RP A+R ++K D ++ A R R + + P+ K+ +R R
Sbjct: 323 SKPQEKD-KKAARPRQASRKTKTSKPQDQDKQ--AARPRQESRKPQDKQAARLR 373
>SB_39230| Best HMM Match : SNF2_N (HMM E-Value=1.40004e-41)
Length = 1682
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/53 (28%), Positives = 27/53 (50%)
Frame = +1
Query: 139 QPESKELKKRGRPPAATRTKDSAKSSDDEQAPVAKRGRGDQKVPRKKRESRAR 297
+ ES+E + +R K+ SS++EQ+ + GD+ +P K+ AR
Sbjct: 1044 ESESEEDTDANKGRGKSRRKEFDTSSEEEQSDEDESSSGDEVIPEKRASGTAR 1096
>SB_20679| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 92
Score = 30.3 bits (65), Expect = 1.4
Identities = 20/59 (33%), Positives = 25/59 (42%)
Frame = +1
Query: 127 ANGTQPESKELKKRGRPPAATRTKDSAKSSDDEQAPVAKRGRGDQKVPRKKRESRARVK 303
A G +P S PP+ + S D QAP AK R + P KRES +K
Sbjct: 6 AMGKEPPSPTAAMGKGPPSPIAAMEGP--SRDSQAPYAKSCRVSESRPAGKRESAPHIK 62
>SB_20363| Best HMM Match : Involucrin (HMM E-Value=0.31)
Length = 353
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/66 (22%), Positives = 30/66 (45%)
Frame = +1
Query: 82 DGSTVVEKKGRGRPKANGTQPESKELKKRGRPPAATRTKDSAKSSDDEQAPVAKRGRGDQ 261
+G E+ + RP+ NG+Q E + ++ ++ S SS DE+ K +
Sbjct: 106 EGQEEKEQSDKKRPQTNGSQEEKGQPSEKNEEKPNIASEHSTPSSGDEKLSKQKESTAEN 165
Query: 262 KVPRKK 279
+ +K+
Sbjct: 166 EHQQKE 171
>SB_10643| Best HMM Match : ShTK (HMM E-Value=2.9e-23)
Length = 2123
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/66 (22%), Positives = 30/66 (45%)
Frame = +1
Query: 82 DGSTVVEKKGRGRPKANGTQPESKELKKRGRPPAATRTKDSAKSSDDEQAPVAKRGRGDQ 261
+G E+ + RP+ NG+Q E + ++ ++ S SS DE+ K +
Sbjct: 384 EGQEEKEQSDKKRPQTNGSQEEKGQPSEKNEEKPNIASEHSTPSSGDEKLSKQKESTAEN 443
Query: 262 KVPRKK 279
+ +K+
Sbjct: 444 EHQQKE 449
>SB_40080| Best HMM Match : DUF1267 (HMM E-Value=2.6)
Length = 109
Score = 29.5 bits (63), Expect = 2.5
Identities = 14/50 (28%), Positives = 27/50 (54%)
Frame = +2
Query: 32 VLAKYLHYKLFSELCLTTVQQLLKRKDAVDQKPMEHNLSRKNLKNEVGLQ 181
VL + HY + L + ++L +R +D+ E+ L R+NL+ + L+
Sbjct: 14 VLCNHPHYLVNELLDIQLNEELSERNSVIDETLEENQLERENLEERMSLK 63
>SB_27251| Best HMM Match : Extensin_2 (HMM E-Value=0.077)
Length = 1043
Score = 29.1 bits (62), Expect = 3.3
Identities = 22/70 (31%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
Frame = +1
Query: 103 KKGRGRPKAN-GTQPESKELKKRGRPPAATRTKDSAKSSDDEQAPVAKRGRGDQKVPRKK 279
+ GR R G + E + R RPP R + SSD Q+ +RG G++K R+
Sbjct: 48 RDGRSRLTGRVGRGGRTTEYRDRERPPLRERNR----SSDVRQSSPWERGLGERKTGRED 103
Query: 280 RESRARVKVE 309
R VE
Sbjct: 104 NRKDRRRDVE 113
>SB_22651| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 950
Score = 29.1 bits (62), Expect = 3.3
Identities = 15/61 (24%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = +1
Query: 103 KKGRGRPKANGTQPESKELKKRGRPPAATRTKDSAKSSDDEQAPVAK-RGRGDQKVPRKK 279
+KG+ + + G + + KE+KK ++ + DDE+ K G+G + KK
Sbjct: 801 EKGKAKKQRKGREKKGKEIKKNDDEEEERDEEEDDEEDDDEEDDSKKASGKGKKGQDNKK 860
Query: 280 R 282
+
Sbjct: 861 K 861
>SB_36607| Best HMM Match : Vicilin_N (HMM E-Value=3.7)
Length = 567
Score = 29.1 bits (62), Expect = 3.3
Identities = 16/61 (26%), Positives = 27/61 (44%)
Frame = +1
Query: 103 KKGRGRPKANGTQPESKELKKRGRPPAATRTKDSAKSSDDEQAPVAKRGRGDQKVPRKKR 282
+ + PK N Q + K+ RP A+R ++K D ++ R + PRK +
Sbjct: 325 RTSQASPKTNKQQDQDKQA---ARPRQASRKTKTSKPQDQDKQATRPRQASHKTKPRKPK 381
Query: 283 E 285
E
Sbjct: 382 E 382
>SB_1052| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1092
Score = 29.1 bits (62), Expect = 3.3
Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
Frame = +1
Query: 73 MSDDGSTVVEKKGRGRPKAN--GTQPESKELKKRGRPPAATRTKDSAKSSDDEQAPVAKR 246
M S+ + K AN G+Q ++KE K+R P + K K + +AP KR
Sbjct: 228 MKQQESSDLNSKALSTHNANTSGSQLQAKEAKRRIVPTLISSDKTEVKKTPPSEAPAKKR 287
>SB_25279| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 182
Score = 28.7 bits (61), Expect = 4.3
Identities = 16/57 (28%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = +1
Query: 136 TQPESKELKKRGRPPAATRTKDSAKSSDDEQAPVAKRGRGDQKVPRKK-RESRARVK 303
++P+ ++ K+ RP A+R ++K D ++ R Q PR+ R+S+AR +
Sbjct: 35 SKPQDQD-KQAARPRQASRKTKTSKPQDQDKQAARPRQAARQARPRQSSRKSKARAR 90
>SB_26185| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 682
Score = 28.7 bits (61), Expect = 4.3
Identities = 19/68 (27%), Positives = 27/68 (39%), Gaps = 1/68 (1%)
Frame = +1
Query: 121 PKANGTQPESKELKKRGRPPAATRTKDSAKSSDDEQAPVAKRGRG-DQKVPRKKRESRAR 297
PK P+ ++ PP DS D E P AK+ G + K+ + R
Sbjct: 470 PKVRSPSPDLTPVQPVAGPPPKRSHHDSENGMDSESEPPAKKTFGFEMKLSSNLPVAGDR 529
Query: 298 VKVEVVDG 321
K+E V G
Sbjct: 530 KKLEAVFG 537
>SB_39593| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 111
Score = 28.3 bits (60), Expect = 5.7
Identities = 13/51 (25%), Positives = 24/51 (47%)
Frame = +1
Query: 76 SDDGSTVVEKKGRGRPKANGTQPESKELKKRGRPPAATRTKDSAKSSDDEQ 228
+DD E+ G P + +P+ K LKK + ++D AK + ++
Sbjct: 58 ADDSDEESEEDGEWDPSKDNPKPQKKALKKGTKRKRKAHSQDGAKEVNGKE 108
>SB_540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 253
Score = 28.3 bits (60), Expect = 5.7
Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = +1
Query: 100 EKKGRGRPKANGTQPES-KELKKRGRPPAATRTKDSAKSSDDEQAPVAKRGRGDQKVPRK 276
+K + R ++ P+S K KKR P+A+ + DS K ++ DQ+ R
Sbjct: 47 KKTKKHRKRSRSPTPDSGKSKKKRHHSPSASES-DSEKRPKGKEKSRKDADDSDQERDRS 105
Query: 277 KRESRAR 297
KR+ + R
Sbjct: 106 KRDKKDR 112
Score = 27.5 bits (58), Expect = 9.9
Identities = 16/63 (25%), Positives = 32/63 (50%)
Frame = +1
Query: 109 GRGRPKANGTQPESKELKKRGRPPAATRTKDSAKSSDDEQAPVAKRGRGDQKVPRKKRES 288
G+ + K + + P + E RP +++ A SD E+ R + D+K ++KR+
Sbjct: 64 GKSKKKRHHS-PSASESDSEKRPKGKEKSRKDADDSDQER----DRSKRDKKDRKEKRDR 118
Query: 289 RAR 297
R++
Sbjct: 119 RSK 121
>SB_47930| Best HMM Match : Vicilin_N (HMM E-Value=1.3)
Length = 769
Score = 28.3 bits (60), Expect = 5.7
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +1
Query: 160 KKRGRPPAATRTKDSAKSSDD-EQAPVAKRGRGDQKVPRKKRES 288
+K+ P A+ + S DD Q P+AKR R +Q+ K+R +
Sbjct: 271 RKKELSPVASDNPFAFTSQDDVPQEPIAKRQRDEQETTDKRRRN 314
>SB_43314| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 326
Score = 28.3 bits (60), Expect = 5.7
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +3
Query: 528 VNSHVSSNLLNYRDSTTFSIEIISPKYSCKKGLF*EMI 641
+NS + + LN++ ST E++ K S G F + I
Sbjct: 191 INSEIRTTFLNFKPSTIADFELLREKLSLLNGTFHQYI 228
>SB_36059| Best HMM Match : TolA (HMM E-Value=0.1)
Length = 1936
Score = 28.3 bits (60), Expect = 5.7
Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +1
Query: 100 EKKGRGRPKANGTQPESKELKKRGRPPAA-TRTKDSAKSSDDEQAPVAKRGR 252
+K GR A +Q ++ E + RG P+ + DS+ DD++ AK G+
Sbjct: 1276 DKLSSGRVTAVASQAQNLEAQTRGGAPSVISERSDSSDVIDDKKKLAAKAGK 1327
>SB_22053| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1670
Score = 28.3 bits (60), Expect = 5.7
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +1
Query: 160 KKRGRPPAATRTKDSAKSSDD-EQAPVAKRGRGDQKVPRKKRES 288
+K+ P A+ + S DD Q P+AKR R +Q+ K+R +
Sbjct: 938 RKKELSPVASDNPFAFTSQDDVPQEPIAKRQRDEQETTDKRRRN 981
>SB_7994| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 907
Score = 28.3 bits (60), Expect = 5.7
Identities = 14/67 (20%), Positives = 30/67 (44%)
Frame = +1
Query: 91 TVVEKKGRGRPKANGTQPESKELKKRGRPPAATRTKDSAKSSDDEQAPVAKRGRGDQKVP 270
+V +K + + E ++ KK+ A R + ++E+ K G G+++
Sbjct: 473 SVKDKLRKAEEAERKAKEEEEKRKKKEAEQARRRARGLEDEEEEEEEEETKEGEGEEEEQ 532
Query: 271 RKKRESR 291
K++E R
Sbjct: 533 DKQQEER 539
>SB_38133| Best HMM Match : TolA (HMM E-Value=0.38)
Length = 2114
Score = 27.9 bits (59), Expect = 7.5
Identities = 13/70 (18%), Positives = 33/70 (47%)
Frame = +1
Query: 100 EKKGRGRPKANGTQPESKELKKRGRPPAATRTKDSAKSSDDEQAPVAKRGRGDQKVPRKK 279
E++ + K + E K+ KK+ + + ++ +DE+ K+ +++ +KK
Sbjct: 1884 EEEDDKKEKKEENEEEEKKKKKKENEEEDDKKNNKEENEEDEKKEKKKKEENEEEDDKKK 1943
Query: 280 RESRARVKVE 309
+ + + K E
Sbjct: 1944 KTKKKKKKEE 1953
>SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1068
Score = 27.9 bits (59), Expect = 7.5
Identities = 20/75 (26%), Positives = 30/75 (40%)
Frame = +1
Query: 85 GSTVVEKKGRGRPKANGTQPESKELKKRGRPPAATRTKDSAKSSDDEQAPVAKRGRGDQK 264
G+++VEK P+A T P E K PA A +++D Q+
Sbjct: 420 GASLVEKVKEAEPEAMETAPVEGEKKDAPDAPAPDAPAPDANATND---ATTNNTEDQQQ 476
Query: 265 VPRKKRESRARVKVE 309
P E++A K E
Sbjct: 477 QPMDTEENKAENKEE 491
>SB_32600| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1572
Score = 27.9 bits (59), Expect = 7.5
Identities = 20/74 (27%), Positives = 30/74 (40%)
Frame = +1
Query: 97 VEKKGRGRPKANGTQPESKELKKRGRPPAATRTKDSAKSSDDEQAPVAKRGRGDQKVPRK 276
+EK+ + AN P S E + R K S ++ AKRGRG + P
Sbjct: 1204 IEKEEPSQSSANSKSP-SPEHQAADREGEHGNEKASVNTAPPSPTRNAKRGRGRRGRPPG 1262
Query: 277 KRESRARVKVEVVD 318
R + R ++ D
Sbjct: 1263 GRRTAQRTNIDAQD 1276
>SB_28214| Best HMM Match : Drf_FH1 (HMM E-Value=3.8)
Length = 361
Score = 27.9 bits (59), Expect = 7.5
Identities = 11/38 (28%), Positives = 21/38 (55%)
Frame = +1
Query: 118 RPKANGTQPESKELKKRGRPPAATRTKDSAKSSDDEQA 231
RP + T+P + K P A RT+++A+ +++ A
Sbjct: 33 RPTSTSTKPTTASTKPTSPPSQAARTRNTAEKPEEKPA 70
>SB_24599| Best HMM Match : Complex1_24kDa (HMM E-Value=0)
Length = 487
Score = 27.9 bits (59), Expect = 7.5
Identities = 17/56 (30%), Positives = 29/56 (51%)
Frame = +1
Query: 112 RGRPKANGTQPESKELKKRGRPPAATRTKDSAKSSDDEQAPVAKRGRGDQKVPRKK 279
RG+PK G + + K L KRG+P + + + +A+ E A R G + R++
Sbjct: 252 RGQPKVPGKRRQPKGLGKRGQPKDSGKRR-AAQGFRKEGAAQGSREEGAAQGSREE 306
>SB_57119| Best HMM Match : Ribosomal_L7Ae (HMM E-Value=1.4e-20)
Length = 1423
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/23 (52%), Positives = 18/23 (78%)
Frame = +1
Query: 220 DEQAPVAKRGRGDQKVPRKKRES 288
D APV KRG+ +++VP+KK+ S
Sbjct: 897 DSTAPVIKRGK-EREVPKKKKPS 918
>SB_13204| Best HMM Match : GRP (HMM E-Value=0.0017)
Length = 723
Score = 27.5 bits (58), Expect = 9.9
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +1
Query: 106 KGRGRPKANGTQPESKELKKRGRPPAATRTKDSAK 210
K +PKA PE+K K P AA + + SAK
Sbjct: 309 KSEEKPKAKRDAPETKTEKVADAPTAADKKEKSAK 343
>SB_6695| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 333
Score = 27.5 bits (58), Expect = 9.9
Identities = 19/50 (38%), Positives = 24/50 (48%)
Frame = +1
Query: 73 MSDDGSTVVEKKGRGRPKANGTQPESKELKKRGRPPAATRTKDSAKSSDD 222
+SDDG +V P ANG +SK+ K A TK S +S DD
Sbjct: 172 VSDDGRSVHFTS----PPANGHDDDSKKKKTVQSKQKAKGTKSSQESEDD 217
>SB_49137| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 323
Score = 27.5 bits (58), Expect = 9.9
Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +1
Query: 121 PKANGTQPESKELKKRGRPPAATRTKDSAKSSDDEQ-APVAKRGRGDQKVPRKK 279
P+ T P + KR P+A + K+ AK D+Q A++G +P++K
Sbjct: 123 PRIILTSPSPGAVPKRLYSPSAIKAKEHAKDEADKQRKKEARKGVHSMWLPKRK 176
>SB_32504| Best HMM Match : TolA (HMM E-Value=0.52)
Length = 422
Score = 27.5 bits (58), Expect = 9.9
Identities = 15/69 (21%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Frame = +1
Query: 100 EKKGRGRPKANGTQPESKELKKRGRPPAATRTKDSAKSSDDEQA-PVAKRGRGDQKVPRK 276
+KK K + E + +KK + TR ++ + + E+ K R +K ++
Sbjct: 126 DKKSDKELKEEKKEKEKERMKKEEKHKEKTRKEEKEREKEKEKTKKEEKESREKEKTKKE 185
Query: 277 KRESRARVK 303
++ES+ + K
Sbjct: 186 EKESKEKDK 194
>SB_12387| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1096
Score = 27.5 bits (58), Expect = 9.9
Identities = 18/75 (24%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Frame = +1
Query: 88 STVVEKKGRGRPKANGTQPESKELKKRGRPPAATRTKDSAKSSDDEQAPVAKRGRGDQKV 267
S + K RGR + G PE K+ +K A R ++ A+ + E+ ++ +
Sbjct: 384 SPATQSKSRGRGRGRGGNPEMKKSRKSAADFA--RDRELARKKEQEKHGSDFEDADEEVI 441
Query: 268 PRKKRESRA-RVKVE 309
++ E + R+K E
Sbjct: 442 VEEENEKESERIKEE 456
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,639,136
Number of Sequences: 59808
Number of extensions: 307707
Number of successful extensions: 1251
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 1079
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1243
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1645141000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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