Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060719.seq
         (647 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090819-1|BAC57913.1|  400|Anopheles gambiae gag-like protein p...    33   0.006
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    32   0.018
AJ549085-1|CAD70159.1|  529|Anopheles gambiae thioredoxin-disulf...    24   4.8  
AJ549084-1|CAD70158.1|  505|Anopheles gambiae thioredoxin-disulf...    24   4.8  
AJ459821-1|CAD30858.1|  502|Anopheles gambiae thioredoxin reduct...    24   4.8  
X87411-1|CAA60858.1|  599|Anopheles gambiae maltase-like protein...    23   6.3  
CR954257-3|CAJ14154.1|  277|Anopheles gambiae predicted protein ...    23   8.3  

>AB090819-1|BAC57913.1|  400|Anopheles gambiae gag-like protein
           protein.
          Length = 400

 Score = 33.5 bits (73), Expect = 0.006
 Identities = 16/51 (31%), Positives = 24/51 (47%)
 Frame = +1

Query: 163 KRGRPPAATRTKDSAKSSDDEQAPVAKRGRGDQKVPRKKRESRARVKVEVV 315
           ++GR P   R +D+       Q    K   G  K P+KK++ R+  K E V
Sbjct: 123 RKGRVPKEARKRDNNARQRSAQRETPKSSGGQSKQPKKKKKKRSLPKPEAV 173


>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-containing
            phosphoprotein protein.
          Length = 1200

 Score = 31.9 bits (69), Expect = 0.018
 Identities = 24/84 (28%), Positives = 34/84 (40%), Gaps = 4/84 (4%)
 Frame = +1

Query: 82   DGSTVVEKKGR--GRPKANGTQPESKELKKRGRPPAATRTKDSAKSSDDEQAPVAK--RG 249
            +GS   +KKG   G+ K      E    K++GR  +      S   SDD +  +A     
Sbjct: 977  EGSRKRKKKGASGGQKKRQKAMDEGLSQKQKGRILSKATVSTSESDSDDSRLKIASGDES 1036

Query: 250  RGDQKVPRKKRESRARVKVEVVDG 321
             G+   P  KR+ R     E  DG
Sbjct: 1037 GGESGAPATKRKRRIASDEEDSDG 1060


>AJ549085-1|CAD70159.1|  529|Anopheles gambiae thioredoxin-disulfide
           reductase protein.
          Length = 529

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 12/37 (32%), Positives = 18/37 (48%)
 Frame = -1

Query: 272 LGTFWSPLPRLATGACSSSEDLAESFVLVAAGGRPRF 162
           LG F      +A     +  +L    V++A GGRPR+
Sbjct: 158 LGYFKDDHTVVAVMKNQTERELRAKHVVIAVGGRPRY 194


>AJ549084-1|CAD70158.1|  505|Anopheles gambiae thioredoxin-disulfide
           reductase protein.
          Length = 505

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 12/37 (32%), Positives = 18/37 (48%)
 Frame = -1

Query: 272 LGTFWSPLPRLATGACSSSEDLAESFVLVAAGGRPRF 162
           LG F      +A     +  +L    V++A GGRPR+
Sbjct: 134 LGYFKDDHTVVAVMKNQTERELRAKHVVIAVGGRPRY 170


>AJ459821-1|CAD30858.1|  502|Anopheles gambiae thioredoxin reductase
           protein.
          Length = 502

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 12/37 (32%), Positives = 18/37 (48%)
 Frame = -1

Query: 272 LGTFWSPLPRLATGACSSSEDLAESFVLVAAGGRPRF 162
           LG F      +A     +  +L    V++A GGRPR+
Sbjct: 131 LGYFKDDHTVVAVMKNQTERELRAKHVVIAVGGRPRY 167


>X87411-1|CAA60858.1|  599|Anopheles gambiae maltase-like protein
           Agm2 protein.
          Length = 599

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +2

Query: 83  TVQQLLKRKDAVDQKPMEHNLSRKNLKNE 169
           TV  + + ++ +DQ   EHN + K L  E
Sbjct: 259 TVDMMYQWRELMDQYKQEHNTTTKVLMTE 287


>CR954257-3|CAJ14154.1|  277|Anopheles gambiae predicted protein
           protein.
          Length = 277

 Score = 23.0 bits (47), Expect = 8.3
 Identities = 9/38 (23%), Positives = 18/38 (47%)
 Frame = +3

Query: 516 LKYLVNSHVSSNLLNYRDSTTFSIEIISPKYSCKKGLF 629
           + Y  N+H+   +   +   +    ++ P+   KKGLF
Sbjct: 57  ISYQPNAHLGEQITYSKTQGSVECTLVIPQAKNKKGLF 94


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 561,704
Number of Sequences: 2352
Number of extensions: 9964
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63977715
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)